WMU66495 (transcribed_cluster) Watermelon (97103) v1

NameWMU66495
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionTransducin family protein/WD-40 repeat protein
LocationChr5 : 747014 .. 747275 (+)
Sequence length262
The following sequences are available for this feature:

transcribed_cluster sequence

GATTAGCCAAAGTGATGAAGAAAATACTGAATGTCACTACTTGTGTACCATACCTTTCACTGGTCACGGTCCTTTTGAGAATGGTCCGACTAATATATTTTCCATTTCGTTGCCTTCTGATTGTAATATAACATATAAATTCAATAAATTTTATGTTATTGGGGGTATGGATAAAAGGATTTCAGGCATTATCATGGGAAATCACCCTACATGCTTATGATATATGTGGGACTGGAATACAGTGCAATTGTGATATTGATAA
BLAST of WMU66495 vs. TAIR10
Match: AT2G46560.1 (AT2G46560.1 transducin family protein / WD-40 repeat family protein)

HSP 1 Score: 52.4 bits (124), Expect = 1.7e-07
Identity = 20/42 (47.62%), Postives = 29/42 (69.05%), Query Frame = 2

Query: 35  HYLCTIPFTGHGPFENGPTNIFSISLPSDCNITYKFNKFYVI 94
           HY+CTIPFT + P ++GPT+IF+  L + C  T+K N+F ++
Sbjct: 589 HYICTIPFTVNSPLQSGPTSIFAKPLSNSCGKTFKSNRFLLL 630

Query: 95  154
           
Sbjct: 649 630

Query: 155 161
           
Sbjct: 709 630

BLAST of WMU66495 vs. NCBI nr
Match: gi|778676845|ref|XP_011650671.1| (PREDICTED: uncharacterized protein LOC101204824 isoform X2 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 4.5e-23
Identity = 50/54 (92.59%), Postives = 52/54 (96.30%), Query Frame = 2

Query: 2   ISQSDEENTECHYLCTIPFTGHGPFENGPTNIFSISLPSDCNITYKFNKFYVIG 61
           ISQSDEENTECHYLCTIPFTGHGPFENGPTNIFSI LPSDCNITYKFNKF ++G
Sbjct: 529 ISQSDEENTECHYLCTIPFTGHGPFENGPTNIFSILLPSDCNITYKFNKFMLLG 582

Query: 62  121
           
Sbjct: 589 582

Query: 122 164
           
Sbjct: 649 582

BLAST of WMU66495 vs. NCBI nr
Match: gi|449433024|ref|XP_004134298.1| (PREDICTED: uncharacterized protein LOC101204824 isoform X1 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 4.5e-23
Identity = 50/54 (92.59%), Postives = 52/54 (96.30%), Query Frame = 2

Query: 2   ISQSDEENTECHYLCTIPFTGHGPFENGPTNIFSISLPSDCNITYKFNKFYVIG 61
           ISQSDEENTECHYLCTIPFTGHGPFENGPTNIFSI LPSDCNITYKFNKF ++G
Sbjct: 582 ISQSDEENTECHYLCTIPFTGHGPFENGPTNIFSILLPSDCNITYKFNKFMLLG 635

Query: 62  121
           
Sbjct: 642 635

Query: 122 164
           
Sbjct: 702 635

BLAST of WMU66495 vs. NCBI nr
Match: gi|659074929|ref|XP_008437872.1| (PREDICTED: uncharacterized protein LOC103483174 isoform X1 [Cucumis melo])

HSP 1 Score: 111.7 bits (278), Expect = 6.5e-22
Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 2

Query: 2   ISQSDEENTECHYLCTIPFTGHGPFENGPTNIFSISLPSDCNITYKFNKFYVIG 61
           ISQSDEENTECHYLCTIPFTGHGPFENGPTNIFSI LPSD NITYKFNKF ++G
Sbjct: 582 ISQSDEENTECHYLCTIPFTGHGPFENGPTNIFSILLPSDINITYKFNKFMLLG 635

Query: 62  121
           
Sbjct: 642 635

Query: 122 164
           
Sbjct: 702 635

BLAST of WMU66495 vs. NCBI nr
Match: gi|659074931|ref|XP_008437873.1| (PREDICTED: uncharacterized protein LOC103483174 isoform X2 [Cucumis melo])

HSP 1 Score: 111.7 bits (278), Expect = 6.5e-22
Identity = 49/54 (90.74%), Postives = 51/54 (94.44%), Query Frame = 2

Query: 2   ISQSDEENTECHYLCTIPFTGHGPFENGPTNIFSISLPSDCNITYKFNKFYVIG 61
           ISQSDEENTECHYLCTIPFTGHGPFENGPTNIFSI LPSD NITYKFNKF ++G
Sbjct: 529 ISQSDEENTECHYLCTIPFTGHGPFENGPTNIFSILLPSDINITYKFNKFMLLG 582

Query: 62  121
           
Sbjct: 589 582

Query: 122 164
           
Sbjct: 649 582

BLAST of WMU66495 vs. NCBI nr
Match: gi|596017123|ref|XP_007218879.1| (hypothetical protein PRUPE_ppa000021mg [Prunus persica])

HSP 1 Score: 87.0 bits (214), Expect = 1.7e-14
Identity = 36/51 (70.59%), Postives = 44/51 (86.27%), Query Frame = 2

Query: 11  SDEENTECHYLCTIPFTGHGPFENGPTNIFSISLPSDCNITYKFNKFYVIG 70
           ++EE+ ECHYLCTIPFTGHGP+ENGPT+IFSI LPS C+ T K NKF ++G
Sbjct: 578 NEEESIECHYLCTIPFTGHGPYENGPTSIFSIPLPSTCHKTLKSNKFMLLG 628

Query: 71  130
           
Sbjct: 638 628

Query: 131 164
           
Sbjct: 698 628

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT2G46560.11.7e-0747.62 transducin family protein / WD-40 repeat family protein[more]
Match NameE-valueIdentityDescription
gi|778676845|ref|XP_011650671.1|4.5e-2392.59PREDICTED: uncharacterized protein LOC101204824 isoform X2 [Cucumis sativus][more]
gi|449433024|ref|XP_004134298.1|4.5e-2392.59PREDICTED: uncharacterized protein LOC101204824 isoform X1 [Cucumis sativus][more]
gi|659074929|ref|XP_008437872.1|6.5e-2290.74PREDICTED: uncharacterized protein LOC103483174 isoform X1 [Cucumis melo][more]
gi|659074931|ref|XP_008437873.1|6.5e-2290.74PREDICTED: uncharacterized protein LOC103483174 isoform X2 [Cucumis melo][more]
gi|596017123|ref|XP_007218879.1|1.7e-1470.59hypothetical protein PRUPE_ppa000021mg [Prunus persica][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla021144Cla021144gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0146880S2_0146880EST