WMU66082 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU66082
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr11 : 6148410 .. 6148944 (+)
Sequence length433
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

TGGCTTGAGATCCACAGTCAATTGAATGGCAACAAGCGAGTCATCTTTATCTCTCATACCCAAAACAGCTCGGGAGTCCCCAACATTTCCAATGACAAGATCCTGACCCTGTTTAACAATAGTCACTGCTGTAGTCCCACTACAGAAGCTATCTATAGTTTGGTGCATTCTGAGTTCCCCAGTCCATAACTCTAAAAGCCTTAAGAAATGACTCCTTCAGAGTATGGAAAAATTTCAGGTTGCTTTTCCGTTCCATCAACATCAGTGGAGGCCCTTGACTCTTCTTCAGCAGATAAAAAGGAAGTAGCTTCATCCGAGTTCATACTTCCTGTATTAAGATTGATCTCTCTATGAACATCATCCGTGGTCAAGTTGACCTCCCAATGTGCACTCAACCTCAGAGGAAGAGAATCCCTCACTTTCTTTGCAACCA
Homology
[Close]
BLAST of WMU66082 vs. TAIR10
Match: AT1G79630.1 (AT1G79630.1 Protein phosphatase 2C family protein)

HSP 1 Score: 94.4 bits (233), Expect = 6.3e-20
Identity = 41/58 (70.69%), Postives = 52/58 (89.66%), Query Frame = -2 

Query: 4   ELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDSRAVLGMRDKDDSLVAIQLTVDLK 63
           EL+MH TID FCSGTT+VT++KQG+DLV+GN+GDSRAVL  RD+D++L+A+QLT+DLK
Sbjct: 209 ELKMHPTIDCFCSGTTSVTLIKQGEDLVVGNIGDSRAVLATRDEDNALLAVQLTIDLK 266

Query: 64   123
           
Sbjct: 269  266

Query: 124  178
           
Sbjct: 329  266

[Close]
BLAST of WMU66082 vs. TAIR10
Match: AT3G02750.3 (AT3G02750.3 Protein phosphatase 2C family protein)

HSP 1 Score: 94.4 bits (233), Expect = 6.3e-20
Identity = 43/71 (60.56%), Postives = 56/71 (78.87%), Query Frame = -2 

Query: 4   RSHFLRLLELWTGELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDSRAVLGMRDKDDS 63
           +  FL+  ++   EL+ H ++D FCSGTTAVT++KQGQ LV+GNVGDSRAV+G RD +++
Sbjct: 190 KESFLKAFKVMDRELKFHGSVDCFCSGTTAVTLIKQGQYLVVGNVGDSRAVMGTRDSENT 249

Query: 64  LVAIQLTVDLK 123
           LVA+QLTVDLK
Sbjct: 250 LVAVQLTVDLK 260

Query: 124  183
           
Sbjct: 310  260

Query: 184  217
           
Sbjct: 370  260


HSP 2 Score: 60.8 bits (146), Expect = 7.7e-10
Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = -3 

Query: 228 VAKKVRDSLPLRLSAHWEVN---------LTTDDVHREINLNTGSMNSDEATSFLSAEEE 287
           VAK+VRD+LPL+LSA+WE           +TTD V+   N+N    ++  A +F++AEEE
Sbjct: 109 VAKRVRDNLPLKLSAYWEAKVPVEGVLKAITTDTVNNVTNINNPE-DAAAAAAFVTAEEE 168

Query: 288 SRASTDV--DGTEKQPEIF 347
            R S D+  + TE QPE+F
Sbjct: 169 PRTSADMEEENTETQPELF 186

Query: 348  407
           
Sbjct: 229  186

Query: 408  432
           
Sbjct: 289  186


HSP 3 Score: 32.3 bits (72), Expect = 2.9e-01
Identity = 14/18 (77.78%), Postives = 14/18 (77.78%), Query Frame = -1 

Query: 182 KFFHTLKESFLKAFRVMD 236
           + F TLKESFLKAF+VMD
Sbjct: 184 ELFQTLKESFLKAFKVMD 201

[Close]
BLAST of WMU66082 vs. TAIR10
Match: AT1G16220.1 (AT1G16220.1 Protein phosphatase 2C family protein)

HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19
Identity = 41/58 (70.69%), Postives = 52/58 (89.66%), Query Frame = -2 

Query: 4   ELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDSRAVLGMRDKDDSLVAIQLTVDLK 63
           EL+MH TI+ FCSGTT+VT++KQG+DLV+GN+GDSRAVL  RD+D++LVA+QLT+DLK
Sbjct: 186 ELKMHPTINCFCSGTTSVTVIKQGKDLVVGNIGDSRAVLATRDQDNALVAVQLTIDLK 243

Query: 64   123
           
Sbjct: 246  243

Query: 124  178
           
Sbjct: 306  243

[Close]
BLAST of WMU66082 vs. TAIR10
Match: AT1G03590.1 (AT1G03590.1 Protein phosphatase 2C family protein)

HSP 1 Score: 87.0 bits (214), Expect = 1.0e-17
Identity = 39/68 (57.35%), Postives = 50/68 (73.53%), Query Frame = -2 

Query: 4   FLRLLELWTGELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDSRAVLGMRDKDDSLVA 63
           FL+       ELR H  ++ FCSG TAVTI+KQG +L +GN+GDSRA+LG +D +DS++A
Sbjct: 162 FLKSFNAMDKELRSHPNLECFCSGCTAVTIIKQGSNLYMGNIGDSRAILGSKDSNDSMIA 221

Query: 64  IQLTVDLK 123
           +QLTVDLK
Sbjct: 222 VQLTVDLK 229

Query: 124  183
           
Sbjct: 282  229

Query: 184  208
           
Sbjct: 342  229

[Close]
BLAST of WMU66082 vs. TAIR10
Match: AT5G36250.1 (AT5G36250.1 Protein phosphatase 2C family protein)

HSP 1 Score: 86.7 bits (213), Expect = 1.3e-17
Identity = 42/58 (72.41%), Postives = 47/58 (81.03%), Query Frame = -2 

Query: 4   ELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDSRAVLGMRDKDDSLVAIQLTVDLK 63
           EL+M   +D FCSGTTAVT+VKQGQ LVIGN+GDSRAVLG+R+KD+ LV  QLT DLK
Sbjct: 194 ELKMQVDVDCFCSGTTAVTMVKQGQHLVIGNIGDSRAVLGVRNKDNKLVPFQLTEDLK 251

Query: 64   123
           
Sbjct: 254  251

Query: 124  178
           
Sbjct: 314  251


HSP 2 Score: 45.8 bits (107), Expect = 2.5e-05
Identity = 24/53 (45.28%), Postives = 32/53 (60.38%), Query Frame = -3 

Query: 273 VAKKVRDSLPLRLSAHWEVNLTTDDVHREINLNTGSMNSDEATSFLSAEEESR 332
           VAK+VRD LPL+L +H E  ++ ++V +EI+LNT      E    +SA  ESR
Sbjct: 112 VAKRVRDLLPLKLGSHLESYVSPEEVLKEISLNTDDRKISEDLVHISANGESR 164

Query: 333  392
           
Sbjct: 172  164

Query: 393  432
           
Sbjct: 232  164

[Close]
BLAST of WMU66082 vs. Swiss-Prot
Match: P2C18_ARATH (Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana GN=At1g79630 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-18
Identity = 41/58 (70.69%), Postives = 52/58 (89.66%), Query Frame = -2 

Query: 4   ELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDSRAVLGMRDKDDSLVAIQLTVDLK 63
           EL+MH TID FCSGTT+VT++KQG+DLV+GN+GDSRAVL  RD+D++L+A+QLT+DLK
Sbjct: 209 ELKMHPTIDCFCSGTTSVTLIKQGEDLVVGNIGDSRAVLATRDEDNALLAVQLTIDLK 266

Query: 64   123
           
Sbjct: 269  266

Query: 124  178
           
Sbjct: 329  266

[Close]
BLAST of WMU66082 vs. Swiss-Prot
Match: P2C33_ARATH (Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-18
Identity = 43/71 (60.56%), Postives = 56/71 (78.87%), Query Frame = -2 

Query: 4   RSHFLRLLELWTGELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDSRAVLGMRDKDDS 63
           +  FL+  ++   EL+ H ++D FCSGTTAVT++KQGQ LV+GNVGDSRAV+G RD +++
Sbjct: 190 KESFLKAFKVMDRELKFHGSVDCFCSGTTAVTLIKQGQYLVVGNVGDSRAVMGTRDSENT 249

Query: 64  LVAIQLTVDLK 123
           LVA+QLTVDLK
Sbjct: 250 LVAVQLTVDLK 260

Query: 124  183
           
Sbjct: 310  260

Query: 184  217
           
Sbjct: 370  260


HSP 2 Score: 60.8 bits (146), Expect = 1.4e-08
Identity = 35/79 (44.30%), Postives = 48/79 (60.76%), Query Frame = -3 

Query: 228 VAKKVRDSLPLRLSAHWEVN---------LTTDDVHREINLNTGSMNSDEATSFLSAEEE 287
           VAK+VRD+LPL+LSA+WE           +TTD V+   N+N    ++  A +F++AEEE
Sbjct: 109 VAKRVRDNLPLKLSAYWEAKVPVEGVLKAITTDTVNNVTNINNPE-DAAAAAAFVTAEEE 168

Query: 288 SRASTDV--DGTEKQPEIF 347
            R S D+  + TE QPE+F
Sbjct: 169 PRTSADMEEENTETQPELF 186

Query: 348  407
           
Sbjct: 229  186

Query: 408  432
           
Sbjct: 289  186


HSP 3 Score: 32.3 bits (72), Expect = 5.2e+00
Identity = 14/18 (77.78%), Postives = 14/18 (77.78%), Query Frame = -1 

Query: 182 KFFHTLKESFLKAFRVMD 236
           + F TLKESFLKAF+VMD
Sbjct: 184 ELFQTLKESFLKAFKVMD 201

[Close]
BLAST of WMU66082 vs. Swiss-Prot
Match: P2C06_ARATH (Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana GN=At1g16220 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.9e-18
Identity = 41/58 (70.69%), Postives = 52/58 (89.66%), Query Frame = -2 

Query: 4   ELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDSRAVLGMRDKDDSLVAIQLTVDLK 63
           EL+MH TI+ FCSGTT+VT++KQG+DLV+GN+GDSRAVL  RD+D++LVA+QLT+DLK
Sbjct: 186 ELKMHPTINCFCSGTTSVTVIKQGKDLVVGNIGDSRAVLATRDQDNALVAVQLTIDLK 243

Query: 64   123
           
Sbjct: 246  243

Query: 124  178
           
Sbjct: 306  243

[Close]
BLAST of WMU66082 vs. Swiss-Prot
Match: P2C14_ORYSJ (Probable protein phosphatase 2C 14 OS=Oryza sativa subsp. japonica GN=Os02g0471500 PE=2 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 3.2e-18
Identity = 46/83 (55.42%), Postives = 63/83 (75.90%), Query Frame = -2 

Query: 4   NGKAT*NFSIL*RSHFLRLLELWTGELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDS 63
           NG+    F+ L R+ FLR   +   +L++H++ID F SGTTAV ++KQG++L+IGN+GDS
Sbjct: 223 NGEYPEIFTAL-RTSFLRAFNVMDRDLKLHKSIDCFFSGTTAVAVLKQGRNLIIGNLGDS 282

Query: 64  RAVLGMRDKDDSLVAIQLTVDLK 123
           RA+LG RDKD+ L+A+QLTVDLK
Sbjct: 283 RAILGTRDKDNQLMAVQLTVDLK 304

Query: 124  183
           
Sbjct: 343  304

Query: 184  243
           
Sbjct: 403  304

Query: 244  253
           
Sbjct: 463  304

[Close]
BLAST of WMU66082 vs. Swiss-Prot
Match: P2C66_ORYSJ (Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g0500300 PE=2 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 9.5e-18
Identity = 41/71 (57.75%), Postives = 54/71 (76.06%), Query Frame = -2 

Query: 4   RSHFLRLLELWTGELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDSRAVLGMRDKDDS 63
           +  + +  +L   EL+MH T+D FCSG+TAVT+VKQG DLV+GN+GDSRA++G RD  ++
Sbjct: 198 KQSYFKAFKLMDKELKMHPTVDCFCSGSTAVTLVKQGLDLVVGNLGDSRAIMGTRDAANN 257

Query: 64  LVAIQLTVDLK 123
           L A+QLTVDLK
Sbjct: 258 LTAVQLTVDLK 268

Query: 124  183
           
Sbjct: 318  268

Query: 184  217
           
Sbjct: 378  268


HSP 2 Score: 41.6 bits (96), Expect = 8.5e-03
Identity = 24/68 (35.29%), Postives = 34/68 (50.00%), Query Frame = -3 

Query: 228 VAKKVRDSLPLRLSAHWEVNLTTDDVHREINLNTGSMNSDEATSFLSAEEESRASTDVDG 287
           VAKKVRDSLP+++   W+ +   D    +    +GS+NS+E     S   +       D 
Sbjct: 132 VAKKVRDSLPVKIRTLWKTSANEDTSSHQNGSISGSVNSEE-----SPVVDDEWGEYADD 191

Query: 288 TEKQPEIF 347
           +EK PE+F
Sbjct: 192 SEKLPEMF 194

Query: 348  407
           
Sbjct: 252  194

Query: 408  432
           
Sbjct: 312  194

[Close]
BLAST of WMU66082 vs. NCBI nr
Match: gi|449442279|ref|XP_004138909.1| (PREDICTED: probable protein phosphatase 2C 33 [Cucumis sativus])

HSP 1 Score: 122.5 bits (306), Expect = 6.1e-25
Identity = 64/69 (92.75%), Postives = 65/69 (94.20%), Query Frame = -3 

Query: 228 VAKKVRDSLPLRLSAHWEVNLTTDDVHREINL-NTGSMNSDEATSFLSAEEESRASTDVD 287
           VAKKVRDSLPLRLSAHWEVNLTTDDVHREI+L NTGSMNSDEATSFLSA EE RAS DVD
Sbjct: 106 VAKKVRDSLPLRLSAHWEVNLTTDDVHREISLNNTGSMNSDEATSFLSANEEFRASIDVD 165

Query: 288 GTEKQPEIF 347
           GTEKQPEIF
Sbjct: 166 GTEKQPEIF 174

Query: 348  407
           
Sbjct: 226  174

Query: 408  432
           
Sbjct: 286  174

[Close]
BLAST of WMU66082 vs. NCBI nr
Match: gi|659082212|ref|XP_008441722.1| (PREDICTED: probable protein phosphatase 2C 33 [Cucumis melo])

HSP 1 Score: 122.1 bits (305), Expect = 7.9e-25
Identity = 63/69 (91.30%), Postives = 66/69 (95.65%), Query Frame = -3 

Query: 228 VAKKVRDSLPLRLSAHWEVNLTTDDVHREINL-NTGSMNSDEATSFLSAEEESRASTDVD 287
           VAKKVRDSLPLRLSAHWEVNLTTDDVHREI+L NTGSMNSDEATSF+SA+EE RAS DVD
Sbjct: 106 VAKKVRDSLPLRLSAHWEVNLTTDDVHREISLNNTGSMNSDEATSFVSADEEFRASIDVD 165

Query: 288 GTEKQPEIF 347
           GTEKQPEIF
Sbjct: 166 GTEKQPEIF 174

Query: 348  407
           
Sbjct: 226  174

Query: 408  432
           
Sbjct: 286  174

[Close]
BLAST of WMU66082 vs. NCBI nr
Match: gi|56117813|gb|AAV73837.1| (protein phosphatase 2c [Medicago sativa])

HSP 1 Score: 109.8 bits (273), Expect = 4.1e-21
Identity = 52/71 (73.24%), Postives = 62/71 (87.32%), Query Frame = -2 

Query: 4   RSHFLRLLELWTGELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDSRAVLGMRDKDDS 63
           +  FL+  ++   EL+MHQTID FCSGTTAVT+VKQG+DL+IGNVGDSRAVLG R+KDDS
Sbjct: 181 KESFLKAFKVMDRELKMHQTIDCFCSGTTAVTLVKQGRDLIIGNVGDSRAVLGTREKDDS 240

Query: 64  LVAIQLTVDLK 123
           LVA+QLTVDLK
Sbjct: 241 LVAVQLTVDLK 251

Query: 124  183
           
Sbjct: 301  251

Query: 184  217
           
Sbjct: 361  251

[Close]
BLAST of WMU66082 vs. NCBI nr
Match: gi|586775640|ref|XP_006857543.1| (PREDICTED: probable protein phosphatase 2C 66 [Amborella trichopoda])

HSP 1 Score: 108.6 bits (270), Expect = 9.1e-21
Identity = 51/71 (71.83%), Postives = 61/71 (85.92%), Query Frame = -2 

Query: 4   RSHFLRLLELWTGELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDSRAVLGMRDKDDS 63
           R  FL+  ++   EL++H TID FCSGTTAVT+VKQGQDLVIGNVGDSRA+LG RD+DDS
Sbjct: 192 RQSFLKAFKVMDKELKLHPTIDCFCSGTTAVTLVKQGQDLVIGNVGDSRAILGTRDQDDS 251

Query: 64  LVAIQLTVDLK 123
           L+A+QLTVDLK
Sbjct: 252 LIAVQLTVDLK 262

Query: 124  183
           
Sbjct: 312  262

Query: 184  217
           
Sbjct: 372  262

[Close]
BLAST of WMU66082 vs. NCBI nr
Match: gi|641835054|gb|KDO54036.1| (hypothetical protein CISIN_1g011218mg [Citrus sinensis])

HSP 1 Score: 108.2 bits (269), Expect = 1.2e-20
Identity = 53/71 (74.65%), Postives = 60/71 (84.51%), Query Frame = -2 

Query: 4   RSHFLRLLELWTGELRMHQTIDSFCSGTTAVTIVKQGQDLVIGNVGDSRAVLGMRDKDDS 63
           +  FL+  ++   ELRMH TID FCSGTTAVT++KQGQ LVIGNVGDSRAVLG RDKDDS
Sbjct: 180 KESFLKAFKVMDRELRMHATIDCFCSGTTAVTLIKQGQHLVIGNVGDSRAVLGTRDKDDS 239

Query: 64  LVAIQLTVDLK 123
           LVA+QLTVDLK
Sbjct: 240 LVAMQLTVDLK 250

Query: 124  183
           
Sbjct: 300  250

Query: 184  217
           
Sbjct: 360  250

The following BLAST results are available for this feature:
BLAST of WMU66082 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G79630.16.3e-2070.69 Protein phosphatase 2C family protein[more]
AT3G02750.36.3e-2060.56 Protein phosphatase 2C family protein[more]
AT1G16220.11.1e-1970.69 Protein phosphatase 2C family protein[more]
AT1G03590.11.0e-1757.35 Protein phosphatase 2C family protein[more]
AT5G36250.11.3e-1772.41 Protein phosphatase 2C family protein[more]
BLAST of WMU66082 vs. Swiss-Prot
Match NameE-valueIdentityDescription
P2C18_ARATH1.1e-1870.69Probable protein phosphatase 2C 18 OS=Arabidopsis thaliana GN=At1g79630 PE=2 SV=... [more]
P2C33_ARATH1.1e-1860.56Probable protein phosphatase 2C 33 OS=Arabidopsis thaliana GN=PPC6-1 PE=1 SV=1[more]
P2C06_ARATH1.9e-1870.69Probable protein phosphatase 2C 6 OS=Arabidopsis thaliana GN=At1g16220 PE=2 SV=1[more]
P2C14_ORYSJ3.2e-1855.42Probable protein phosphatase 2C 14 OS=Oryza sativa subsp. japonica GN=Os02g04715... [more]
P2C66_ORYSJ9.5e-1857.75Probable protein phosphatase 2C 66 OS=Oryza sativa subsp. japonica GN=Os08g05003... [more]
BLAST of WMU66082 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449442279|ref|XP_004138909.1|6.1e-2592.75PREDICTED: probable protein phosphatase 2C 33 [Cucumis sativus][more]
gi|659082212|ref|XP_008441722.1|7.9e-2591.30PREDICTED: probable protein phosphatase 2C 33 [Cucumis melo][more]
gi|56117813|gb|AAV73837.1|4.1e-2173.24protein phosphatase 2c [Medicago sativa][more]
gi|586775640|ref|XP_006857543.1|9.1e-2171.83PREDICTED: probable protein phosphatase 2C 66 [Amborella trichopoda][more]
gi|641835054|gb|KDO54036.1|1.2e-2074.65hypothetical protein CISIN_1g011218mg [Citrus sinensis][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR001932PPM-type_phosphatase_dom
IPR015655PP2C
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0004722protein serine/threonine phosphatase activity
Vocabulary: Biological Process
TermDefinition
GO:0006470protein dephosphorylation
GO Annotation
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006470 protein dephosphorylation
molecular_function GO:0003824 catalytic activity
molecular_function GO:0004722 protein serine/threonine phosphatase activity
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla004138Cla004138gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0139257S2_0139257EST


InterPro
Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001932PPM-type phosphatase domainGENE3DG3DSA:3.60.40.10coord: 89..145
score: 7.1
IPR001932PPM-type phosphatase domainPFAMPF00481PP2Ccoord: 98..142
score: 1.
IPR001932PPM-type phosphatase domainPROFILEPS51746PPM_2coord: 1..145
score: 11
IPR001932PPM-type phosphatase domainunknownSSF81606PP2C-likecoord: 90..145
score: 1.7
IPR015655Protein phosphatase 2C familyPANTHERPTHR13832PROTEIN PHOSPHATASE 2Ccoord: 67..145
score: 5.7E-47coord: 2..19
score: 5.7
NoneNo IPR availablePANTHERPTHR13832:SF286PROTEIN PHOSPHATASE 2C 33-RELATEDcoord: 67..145
score: 5.7E-47coord: 2..19
score: 5.7