WMU63419 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU63419
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr1 : 17509639 .. 17510703 (-)
Sequence length469
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

TTCTGTGTAGAGTTCAATACATCTCCAGAGATAACAGAACCAATTTTGTTTCCCAATGAAGTCTGTGAAGGTAAGGACTTTAGATCACCTGAATCCGTAGCTTGAACGCCAATTATCCCCTTAGGTTGCTTTACAGAAGGCTTCGAACTCTTTGAGGCCATCAGAACTAACAAAGAGCTTTATTAAAACAAATCAGATTTTGAGAAAATTCATTGATCAGCAGTTTCAGTACACATTATCAAGCCCACTCCTATCTTTTGGTCTTCCATCCAGAGAATTATATCCTGAAAAATTCCAAGAACAACAACAACTCAGAACGCAAAACCGTTTCAAAAAGGGGGAAACAGAGGAAACCCCAGATCTTGAAAACGAAAACCTCAAGCTTCTTCAATGGAACCCCCAGAAGAGAACAGATCGAAGAGGGAAAAGAAAACACAACCCCAGATGCAAAAACCAGAAGAAGAAGAAG
Homology
[Close]
BLAST of WMU63419 vs. NCBI nr
Match: gi|659128646|ref|XP_008464303.1| (PREDICTED: protein kinase G11A-like [Cucumis melo])

HSP 1 Score: 66.2 bits (160), Expect = 5.6e-08
Identity = 34/38 (89.47%), Postives = 35/38 (92.11%), Query Frame = -3 

Query: 3   IIGVQATDSGDLKSLPSQTSLGNKIGSVISGDVLNSTQ 62
           I GV+ATD  DLKSLPSQTSLGNKIGSVISGDVLNSTQ
Sbjct: 17  ITGVKATDVSDLKSLPSQTSLGNKIGSVISGDVLNSTQ 54

Query: 63   117
           
Sbjct: 77   54

[Close]
BLAST of WMU63419 vs. NCBI nr
Match: gi|449443506|ref|XP_004139518.1| (PREDICTED: serine/threonine-protein kinase D6PK-like [Cucumis sativus])

HSP 1 Score: 60.8 bits (146), Expect = 2.4e-06
Identity = 31/39 (79.49%), Postives = 33/39 (84.62%), Query Frame = -3 

Query: 3   GIIGVQATDSGDLKSLPSQTSLGNKIGSVISGDVLNSTQ 62
           GI GV+ TD   LKSLPSQTSLGNKIGSV+SGDVLN TQ
Sbjct: 16  GITGVKGTDVSVLKSLPSQTSLGNKIGSVVSGDVLNYTQ 54

Query: 63   120
           
Sbjct: 76   54

The following BLAST results are available for this feature:
BLAST of WMU63419 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659128646|ref|XP_008464303.1|5.6e-0889.47PREDICTED: protein kinase G11A-like [Cucumis melo][more]
gi|449443506|ref|XP_004139518.1|2.4e-0679.49PREDICTED: serine/threonine-protein kinase D6PK-like [Cucumis sativus][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla011007Cla011007gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0090472S2_0090472EST