WMU62172 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU62172
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr5 : 3382116 .. 3382617 (-)
Sequence length503
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GATCGTCCTCAGCACTTCTAGGGTTTCTTTCCTCGCCTCCTCTCTCTCTTCCTCTCCCGCCGTAAAAATCCTCCTAATCGTCGCTTCCTATAGAAAAATCAAAGGATCCAAAAATGTCCTCGGATCTAAACAGAGCAGAATTAGAATATGAAAACGATTGCCTTACCTTATCCTCAATGAATTTGATCCAGAAGCGAGCGGTGGCTCTGTGGAAAGGATCGGACGGTAGCAGAGGTTTTTCCGGCCAAGTGTCGTCGATGTACTCGAGGATGACGGCGGATTCGCAGATAGGGTTTCCGGCATGGACGAGCACCGGAATCTTCTTGTGGACGGGATTGTAATGAAGGAGCAAAAGGGGGTTTTGTTGGCCATGTGTTCTTGAATAAAATGGTAGGGTATGCGTTTGAGTTGCAGAGCCCATATCACTCTGTAGCTGAAAGGACTTGCCCAACTTCCATGGACCTTCACTTCTTCTTCCATCCTCAAATTCAACTAAATCTTCC
Homology
[Close]
BLAST of WMU62172 vs. TAIR10
Match: AT1G17180.1 (AT1G17180.1 glutathione S-transferase TAU 25)

HSP 1 Score: 95.9 bits (237), Expect = 2.5e-20
Identity = 43/67 (64.18%), Postives = 50/67 (74.63%), Query Frame = -2 

Query: 155 LLLHYNPVHKKIPVLVHAGNPICESAVILEYIDDTWPEK-PLLPSDPFHRATARFWIKFI 214
           +LL  NPVHKKIPVL+H GNP+CES + +EYID+ WP K PLLPSDP+ RA A+FW  FI
Sbjct: 43  ILLEMNPVHKKIPVLIHNGNPVCESLIQIEYIDEVWPSKTPLLPSDPYQRAQAKFWGDFI 102

Query: 215 EDKVRQS 274
           + KV  S
Sbjct: 103 DKKVYAS 109

Query: 275  334
           
Sbjct: 163  109

Query: 335  353
           
Sbjct: 223  109

[Close]
BLAST of WMU62172 vs. TAIR10
Match: AT1G17170.1 (AT1G17170.1 glutathione S-transferase TAU 24)

HSP 1 Score: 95.1 bits (235), Expect = 4.3e-20
Identity = 42/64 (65.62%), Postives = 49/64 (76.56%), Query Frame = -2 

Query: 164 LLLHYNPVHKKIPVLVHAGNPICESAVILEYIDDTWPE-KPLLPSDPFHRATARFWIKFI 223
           LLL  NPVHKKIPVL+H G P+CES + +EYID+TWP+  PLLPSDP+ RA A+FW  FI
Sbjct: 43  LLLEMNPVHKKIPVLIHNGKPVCESLIQIEYIDETWPDNNPLLPSDPYKRAHAKFWADFI 102

Query: 224 EDKV 283
           + KV
Sbjct: 103 DKKV 106

Query: 284  343
           
Sbjct: 163  106

Query: 344  353
           
Sbjct: 223  106

[Close]
BLAST of WMU62172 vs. TAIR10
Match: AT2G29420.1 (AT2G29420.1 glutathione S-transferase tau 7)

HSP 1 Score: 93.6 bits (231), Expect = 1.2e-19
Identity = 40/63 (63.49%), Postives = 47/63 (74.60%), Query Frame = -2 

Query: 164 LLLHYNPVHKKIPVLVHAGNPICESAVILEYIDDTWPEKPLLPSDPFHRATARFWIKFIE 223
           LLL  NPVHK IPVLVH G PI ES VILEYID+TW + P+LP DP+ R  ARFW KF++
Sbjct: 48  LLLQLNPVHKMIPVLVHNGKPISESLVILEYIDETWRDNPILPQDPYERTMARFWSKFVD 107

Query: 224 DKV 283
           +++
Sbjct: 108 EQI 110

Query: 284  343
           
Sbjct: 168  110

Query: 344  353
           
Sbjct: 228  110


HSP 2 Score: 45.1 bits (105), Expect = 5.1e-05
Identity = 20/39 (51.28%), Postives = 26/39 (66.67%), Query Frame = -3 

Query: 358 EEVKVHGSWASPFSYRVIWALQLKRIPYHFIQEHMANKT 417
           EEVK+ G WASPFS R+  AL LK + Y F+++ + NK+
Sbjct: 8   EEVKLLGMWASPFSRRIEIALTLKGVSYEFLEQDITNKS 46

Query: 418  475
           
Sbjct: 68   46

[Close]
BLAST of WMU62172 vs. TAIR10
Match: AT1G78340.1 (AT1G78340.1 glutathione S-transferase TAU 22)

HSP 1 Score: 91.7 bits (226), Expect = 4.7e-19
Identity = 38/64 (59.38%), Postives = 49/64 (76.56%), Query Frame = -2 

Query: 164 LLLHYNPVHKKIPVLVHAGNPICESAVILEYIDDTWPEK-PLLPSDPFHRATARFWIKFI 223
           LLL  NPVHKKIPVL+H G P+CES  +++YID+ W +K P+LPSDP+ RA ARFW+ F+
Sbjct: 43  LLLQMNPVHKKIPVLIHNGKPVCESMNVVQYIDEVWSDKNPILPSDPYQRAQARFWVDFV 102

Query: 224 EDKV 283
           + K+
Sbjct: 103 DTKL 106

Query: 284  343
           
Sbjct: 163  106

Query: 344  353
           
Sbjct: 223  106

[Close]
BLAST of WMU62172 vs. TAIR10
Match: AT1G78370.1 (AT1G78370.1 glutathione S-transferase TAU 20)

HSP 1 Score: 90.1 bits (222), Expect = 1.4e-18
Identity = 38/63 (60.32%), Postives = 46/63 (73.02%), Query Frame = -2 

Query: 167 LLLHYNPVHKKIPVLVHAGNPICESAVILEYIDDTWPEK-PLLPSDPFHRATARFWIKFI 226
           LLL  NP+HKKIPVLVH G P+CES  +++Y+D+ WPEK P  PSDP+ RA ARFW  F+
Sbjct: 43  LLLQSNPIHKKIPVLVHNGKPVCESLNVVQYVDEAWPEKNPFFPSDPYGRAQARFWADFV 102

Query: 227 EDK 286
           + K
Sbjct: 103 DKK 105

Query: 287  346
           
Sbjct: 163  105

Query: 347  353
           
Sbjct: 223  105

[Close]
BLAST of WMU62172 vs. Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 4.0e-20
Identity = 45/70 (64.29%), Postives = 51/70 (72.86%), Query Frame = -2 

Query: 143 LLLHYNPVHKKIPVLVHAGNPICESAVILEYIDDTWPEKPLLPSDPFHRATARFWIKFIE 202
           LLL YNPVHKK+PV VH   PI ES VI+EYID+TW   P+LPSDP+ RA ARFW KFI+
Sbjct: 46  LLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNNPILPSDPYQRALARFWSKFID 105

Query: 203 DKVRQSFSYS 262
           DK+  + S S
Sbjct: 106 DKIVGAVSKS 115

Query: 263  322
           
Sbjct: 166  115

Query: 323  353
           
Sbjct: 226  115


HSP 2 Score: 38.1 bits (87), Expect = 1.1e-01
Identity = 18/40 (45.00%), Postives = 26/40 (65.00%), Query Frame = -3 

Query: 358 EEEVKVHGSWASPFSYRVIWALQLKRIPYHFIQEHMANKT 417
           +E+VK+ G   SPF  RV  AL+LK + Y F++E++ NK+
Sbjct: 5   QEDVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKS 44

Query: 418  477
           
Sbjct: 65   44

[Close]
BLAST of WMU62172 vs. Swiss-Prot
Match: GSTUP_ARATH (Glutathione S-transferase U25 OS=Arabidopsis thaliana GN=GSTU25 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 4.5e-19
Identity = 43/67 (64.18%), Postives = 50/67 (74.63%), Query Frame = -2 

Query: 155 LLLHYNPVHKKIPVLVHAGNPICESAVILEYIDDTWPEK-PLLPSDPFHRATARFWIKFI 214
           +LL  NPVHKKIPVL+H GNP+CES + +EYID+ WP K PLLPSDP+ RA A+FW  FI
Sbjct: 43  ILLEMNPVHKKIPVLIHNGNPVCESLIQIEYIDEVWPSKTPLLPSDPYQRAQAKFWGDFI 102

Query: 215 EDKVRQS 274
           + KV  S
Sbjct: 103 DKKVYAS 109

Query: 275  334
           
Sbjct: 163  109

Query: 335  353
           
Sbjct: 223  109

[Close]
BLAST of WMU62172 vs. Swiss-Prot
Match: GSTUO_ARATH (Glutathione S-transferase U24 OS=Arabidopsis thaliana GN=GSTU24 PE=2 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 7.6e-19
Identity = 42/64 (65.62%), Postives = 49/64 (76.56%), Query Frame = -2 

Query: 164 LLLHYNPVHKKIPVLVHAGNPICESAVILEYIDDTWPE-KPLLPSDPFHRATARFWIKFI 223
           LLL  NPVHKKIPVL+H G P+CES + +EYID+TWP+  PLLPSDP+ RA A+FW  FI
Sbjct: 43  LLLEMNPVHKKIPVLIHNGKPVCESLIQIEYIDETWPDNNPLLPSDPYKRAHAKFWADFI 102

Query: 224 EDKV 283
           + KV
Sbjct: 103 DKKV 106

Query: 284  343
           
Sbjct: 163  106

Query: 344  353
           
Sbjct: 223  106

[Close]
BLAST of WMU62172 vs. Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-18
Identity = 39/64 (60.94%), Postives = 52/64 (81.25%), Query Frame = -2 

Query: 164 LLLHYNPVHKKIPVLVHAGNPICESAVILEYIDDTWPEK-PLLPSDPFHRATARFWIKFI 223
           LLL  NP+HKKIPVL+H G PICESA+I++YID+ W +K PL+PSDP+ R+ ARFW+ +I
Sbjct: 43  LLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYI 102

Query: 224 EDKV 283
           + K+
Sbjct: 103 DKKI 106

Query: 284  343
           
Sbjct: 163  106

Query: 344  353
           
Sbjct: 223  106

[Close]
BLAST of WMU62172 vs. Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 1.3e-18
Identity = 42/64 (65.62%), Postives = 49/64 (76.56%), Query Frame = -2 

Query: 164 LLLHYNPVHKKIPVLVHAGNPICESAVILEYIDDTWPEK-PLLPSDPFHRATARFWIKFI 223
           LLL  NPVHKKIP+L+H G PICES  ILEYID+ W EK PLLPSDP+ R+ ARFW  +I
Sbjct: 44  LLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYI 103

Query: 224 EDKV 283
           ++K+
Sbjct: 104 DNKI 107

Query: 284  343
           
Sbjct: 164  107

Query: 344  353
           
Sbjct: 224  107

[Close]
BLAST of WMU62172 vs. NCBI nr
Match: gi|659075974|ref|XP_008438431.1| (PREDICTED: probable glutathione S-transferase [Cucumis melo])

HSP 1 Score: 128.6 bits (322), Expect = 9.9e-27
Identity = 61/83 (73.49%), Postives = 67/83 (80.72%), Query Frame = -2 

Query: 167 ATQTHTLPFYSRTHGQQNPL-LLLHYNPVHKKIPVLVHAGNPICESAVILEYIDDTWPEK 226
           A Q   +P++       N   LLLHYNPV+KKIPVL+HAGNPICESAVILEYI+DTWPE 
Sbjct: 24  ALQLKHIPYHFIQEDMANKSPLLLHYNPVYKKIPVLIHAGNPICESAVILEYINDTWPEN 83

Query: 227 PLLPSDPFHRATARFWIKFIEDK 286
           PLLPSDPF RATARFWIKFIEDK
Sbjct: 84  PLLPSDPFDRATARFWIKFIEDK 106

Query: 287  346
           
Sbjct: 144  106

Query: 347  406
           
Sbjct: 204  106

Query: 407  413
           
Sbjct: 264  106

[Close]
BLAST of WMU62172 vs. NCBI nr
Match: gi|23978432|dbj|BAC21263.1| (glutathione S-transferase [Cucurbita maxima])

HSP 1 Score: 127.5 bits (319), Expect = 2.2e-26
Identity = 56/62 (90.32%), Postives = 58/62 (93.55%), Query Frame = -2 

Query: 167 LLLHYNPVHKKIPVLVHAGNPICESAVILEYIDDTWPEKPLLPSDPFHRATARFWIKFIE 226
           LLLHYNPVHKKIPVLVH G PICES +ILEYID+TWPEKPLLPSDPF RATARFWIKFIE
Sbjct: 42  LLLHYNPVHKKIPVLVHGGKPICESMIILEYIDETWPEKPLLPSDPFERATARFWIKFIE 101

Query: 227 DK 286
           DK
Sbjct: 102 DK 103

Query: 287  346
           
Sbjct: 162  103

Query: 347  353
           
Sbjct: 222  103

[Close]
BLAST of WMU62172 vs. NCBI nr
Match: gi|659075962|ref|XP_008438425.1| (PREDICTED: probable glutathione S-transferase [Cucumis melo])

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-24
Identity = 52/62 (83.87%), Postives = 58/62 (93.55%), Query Frame = -2 

Query: 167 LLLHYNPVHKKIPVLVHAGNPICESAVILEYIDDTWPEKPLLPSDPFHRATARFWIKFIE 226
           LLL YNPVHKKIPVLVHAGNPICES +ILEYI++TWP+ PLLPSDP+ RATARFWIKFI+
Sbjct: 42  LLLQYNPVHKKIPVLVHAGNPICESIIILEYIEETWPQNPLLPSDPYERATARFWIKFID 101

Query: 227 DK 286
           DK
Sbjct: 102 DK 103

Query: 287  346
           
Sbjct: 162  103

Query: 347  353
           
Sbjct: 222  103

[Close]
BLAST of WMU62172 vs. NCBI nr
Match: gi|659075966|ref|XP_008438427.1| (PREDICTED: probable glutathione S-transferase isoform X2 [Cucumis melo])

HSP 1 Score: 118.6 bits (296), Expect = 1.0e-23
Identity = 52/62 (83.87%), Postives = 55/62 (88.71%), Query Frame = -2 

Query: 167 LLLHYNPVHKKIPVLVHAGNPICESAVILEYIDDTWPEKPLLPSDPFHRATARFWIKFIE 226
           LLL YNPVHKKIPVLVHAG PICES +IL+YID+TWPE PLLPSDP  RA ARFWIKFIE
Sbjct: 42  LLLQYNPVHKKIPVLVHAGKPICESMIILQYIDETWPENPLLPSDPIQRAAARFWIKFIE 101

Query: 227 DK 286
           DK
Sbjct: 102 DK 103

Query: 287  346
           
Sbjct: 162  103

Query: 347  353
           
Sbjct: 222  103

[Close]
BLAST of WMU62172 vs. NCBI nr
Match: gi|255554288|ref|XP_002518184.1| (PREDICTED: probable glutathione S-transferase [Ricinus communis])

HSP 1 Score: 117.1 bits (292), Expect = 3.0e-23
Identity = 50/62 (80.65%), Postives = 54/62 (87.10%), Query Frame = -2 

Query: 167 LLLHYNPVHKKIPVLVHAGNPICESAVILEYIDDTWPEKPLLPSDPFHRATARFWIKFIE 226
           LLL YNPVHKKIPVLVH G PICES +ILEY+D+TWPE PLLPSDP  RA ARFW+KFIE
Sbjct: 43  LLLQYNPVHKKIPVLVHGGKPICESTIILEYLDETWPENPLLPSDPHERAVARFWVKFIE 102

Query: 227 DK 286
           DK
Sbjct: 103 DK 104

Query: 287  346
           
Sbjct: 163  104

Query: 347  353
           
Sbjct: 223  104

The following BLAST results are available for this feature:
BLAST of WMU62172 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G17180.12.5e-2064.18 glutathione S-transferase TAU 25[more]
AT1G17170.14.3e-2065.63 glutathione S-transferase TAU 24[more]
AT2G29420.11.2e-1963.49 glutathione S-transferase tau 7[more]
AT1G78340.14.7e-1959.38 glutathione S-transferase TAU 22[more]
AT1G78370.11.4e-1860.32 glutathione S-transferase TAU 20[more]
BLAST of WMU62172 vs. Swiss-Prot
Match NameE-valueIdentityDescription
GSTX6_SOYBN4.0e-2064.29Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1[more]
GSTUP_ARATH4.5e-1964.18Glutathione S-transferase U25 OS=Arabidopsis thaliana GN=GSTU25 PE=1 SV=1[more]
GSTUO_ARATH7.6e-1965.63Glutathione S-transferase U24 OS=Arabidopsis thaliana GN=GSTU24 PE=2 SV=1[more]
GSTX3_SOYBN1.3e-1860.94Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1[more]
GSTX1_NICPL1.3e-1865.63Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 P... [more]
BLAST of WMU62172 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075974|ref|XP_008438431.1|9.9e-2773.49PREDICTED: probable glutathione S-transferase [Cucumis melo][more]
gi|23978432|dbj|BAC21263.1|2.2e-2690.32glutathione S-transferase [Cucurbita maxima][more]
gi|659075962|ref|XP_008438425.1|1.6e-2483.87PREDICTED: probable glutathione S-transferase [Cucumis melo][more]
gi|659075966|ref|XP_008438427.1|1.0e-2383.87PREDICTED: probable glutathione S-transferase isoform X2 [Cucumis melo][more]
gi|255554288|ref|XP_002518184.1|3.0e-2380.65PREDICTED: probable glutathione S-transferase [Ricinus communis][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR004045Glutathione_S-Trfase_N
IPR010987Glutathione-S-Trfase_C-like
IPR012336Thioredoxin-like_fold
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO Annotation
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla021465Cla021465gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0067317S2_0067317EST


InterPro
Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004045Glutathione S-transferase, N-terminalPFAMPF02798GST_Ncoord: 40..84
score: 1.
IPR004045Glutathione S-transferase, N-terminalPROFILEPS50404GST_NTERcoord: 1..91
score: 12
IPR010987Glutathione S-transferase, C-terminal-likeGENE3DG3DSA:1.20.1050.10coord: 94..118
score: 1.
IPR012336Thioredoxin-like foldGENE3DG3DSA:3.40.30.10coord: 47..93
score: 1.3
IPR012336Thioredoxin-like foldunknownSSF52833Thioredoxin-likecoord: 49..113
score: 3.36
NoneNo IPR availablePANTHERPTHR11260GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAININGcoord: 52..114
score: 2.2
NoneNo IPR availablePANTHERPTHR11260:SF227SUBFAMILY NOT NAMEDcoord: 52..114
score: 2.2