WMU62163 (transcribed_cluster) Watermelon (97103) v1

NameWMU62163
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr5 : 4754950 .. 4755057 (+)
Sequence length107
The following sequences are available for this feature:

transcribed_cluster sequence

AATTTGAAGCTTCCCTTCTATCCTCTCGCCTTTTCTTGGAGTGTATACCAGATTATGGATATCATCAGCCAATGCTCTCTGGGCTAAAACAGCCCCACCAGCAGCAC
BLAST of WMU62163 vs. TAIR10
Match: AT3G22450.1 (AT3G22450.1 Ribosomal L18p/L5e family protein)

HSP 1 Score: 58.9 bits (141), Expect = 7.1e-10
Identity = 26/35 (74.29%), Postives = 31/35 (88.57%), Query Frame = -3

Query: 1   AAGGAVLAQRALADDIHNLVYTPRKGERIEGKLQI 60
           AA GAVLAQR+L DDIH+++YTPRKG++IEGKLQ+
Sbjct: 246 AAVGAVLAQRSLEDDIHDVIYTPRKGDKIEGKLQV 280

Query: 61  106
           
Sbjct: 306 280

BLAST of WMU62163 vs. NCBI nr
Match: gi|659118877|ref|XP_008459355.1| (PREDICTED: uncharacterized protein LOC103498514 [Cucumis melo])

HSP 1 Score: 68.2 bits (165), Expect = 3.3e-09
Identity = 32/35 (91.43%), Postives = 34/35 (97.14%), Query Frame = -3

Query: 1   AAGGAVLAQRALADDIHNLVYTPRKGERIEGKLQI 60
           AA GAVLAQRALADDIHNL+YTPRKGERIEGKLQ+
Sbjct: 269 AAVGAVLAQRALADDIHNLIYTPRKGERIEGKLQV 303

Query: 61  106
           
Sbjct: 329 303

BLAST of WMU62163 vs. NCBI nr
Match: gi|778707360|ref|XP_011656005.1| (PREDICTED: uncharacterized protein LOC101213193 [Cucumis sativus])

HSP 1 Score: 67.0 bits (162), Expect = 7.4e-09
Identity = 32/35 (91.43%), Postives = 33/35 (94.29%), Query Frame = -3

Query: 1   AAGGAVLAQRALADDIHNLVYTPRKGERIEGKLQI 60
           AA GAVLAQRAL DDIHNL+YTPRKGERIEGKLQI
Sbjct: 269 AAVGAVLAQRALGDDIHNLIYTPRKGERIEGKLQI 303

Query: 61  106
           
Sbjct: 329 303

BLAST of WMU62163 vs. NCBI nr
Match: gi|356540329|ref|XP_003538642.1| (PREDICTED: uncharacterized protein LOC100802391 [Glycine max])

HSP 1 Score: 65.5 bits (158), Expect = 2.2e-08
Identity = 30/35 (85.71%), Postives = 34/35 (97.14%), Query Frame = -3

Query: 1   AAGGAVLAQRALADDIHNLVYTPRKGERIEGKLQI 60
           AA GA+LAQRALADDIH++VYTPRKGER+EGKLQI
Sbjct: 268 AAVGAILAQRALADDIHDIVYTPRKGERVEGKLQI 302

Query: 61  106
           
Sbjct: 328 302

BLAST of WMU62163 vs. NCBI nr
Match: gi|695022618|ref|XP_009398445.1| (PREDICTED: uncharacterized protein LOC103983032 [Musa acuminata subsp. malaccensis])

HSP 1 Score: 64.3 bits (155), Expect = 4.8e-08
Identity = 30/35 (85.71%), Postives = 33/35 (94.29%), Query Frame = -3

Query: 1   AAGGAVLAQRALADDIHNLVYTPRKGERIEGKLQI 60
           AA GAVLAQRA+ DDIHN+VYTPRKGERIEGK+QI
Sbjct: 282 AAVGAVLAQRAIEDDIHNVVYTPRKGERIEGKIQI 316

Query: 61  106
           
Sbjct: 342 316

BLAST of WMU62163 vs. NCBI nr
Match: gi|1012350600|gb|KYP61789.1| (hypothetical protein KK1_016300 [Cajanus cajan])

HSP 1 Score: 64.3 bits (155), Expect = 4.8e-08
Identity = 29/35 (82.86%), Postives = 34/35 (97.14%), Query Frame = -3

Query: 1   AAGGAVLAQRALADDIHNLVYTPRKGERIEGKLQI 60
           AA GA+LAQRALADDIH+++YTPRKGER+EGKLQI
Sbjct: 270 AAVGAILAQRALADDIHDVIYTPRKGERLEGKLQI 304

Query: 61  106
           
Sbjct: 330 304

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT3G22450.17.1e-1074.29 Ribosomal L18p/L5e family protein[more]
Match NameE-valueIdentityDescription
gi|659118877|ref|XP_008459355.1|3.3e-0991.43PREDICTED: uncharacterized protein LOC103498514 [Cucumis melo][more]
gi|778707360|ref|XP_011656005.1|7.4e-0991.43PREDICTED: uncharacterized protein LOC101213193 [Cucumis sativus][more]
gi|356540329|ref|XP_003538642.1|2.2e-0885.71PREDICTED: uncharacterized protein LOC100802391 [Glycine max][more]
gi|695022618|ref|XP_009398445.1|4.8e-0885.71PREDICTED: uncharacterized protein LOC103983032 [Musa acuminata subsp. malaccens... [more]
gi|1012350600|gb|KYP61789.1|4.8e-0882.86hypothetical protein KK1_016300 [Cajanus cajan][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla021627Cla021627gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0067085S2_0067085EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR1289939S RIBOSOMAL PROTEIN L18, MITOCHONDRIALcoord: 2..36
score: 8.9
NoneNo IPR availablePANTHERPTHR12899:SF9EXPRESSED PROTEINcoord: 2..36
score: 8.9