WMU61400 (transcribed_cluster) Watermelon (97103) v1

NameWMU61400
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr5 : 848127 .. 848797 (-)
Sequence length249
The following sequences are available for this feature:

transcribed_cluster sequence

TCATTCTAAGAAAGAATCTTTTGACATTCGATAAAAGGGATGACACAGCCAATACTGCATCAATGCAGAAAGAAGCAATGCCTCTCTCAGAAATTAGTTCAAATGCAATCAATGAAATGAAAGGGCCAAATATTTTGTAGAGAGCAAAAGAATGAAATAGGAGGGCACTTGTTCATACCATCCAACATAAGAAGGAAACTGATTCACCAGCCAAAGAAGGATTTCTTTCGAAAGTACGGAAAATAGTTT
BLAST of WMU61400 vs. NCBI nr
Match: gi|659074979|ref|XP_008437898.1| (PREDICTED: uncharacterized protein LOC103483189 [Cucumis melo])

HSP 1 Score: 86.3 bits (212), Expect = 2.8e-14
Identity = 53/81 (65.43%), Postives = 59/81 (72.84%), Query Frame = 3

Query: 9   RKNLLTFDKRDDTANTASMQKEAMPLSEISSNAI---NEMKGPNIL*RAKE*NRRALVHT 68
           +K   T DKRD+  N ASMQKEAMPLSEISSN I   NE+ GPNI  RAK+    ALVHT
Sbjct: 154 KKESQTSDKRDE--NVASMQKEAMPLSEISSNLIIPINEVMGPNIFERAKD-EMEALVHT 213

Query: 69  IQHKKETDSPAKEGFLSKVRK 128
           I  KKETDS AKEGFL+K+ K
Sbjct: 214 IHPKKETDSLAKEGFLTKLGK 231

Query: 129 188
           
Sbjct: 274 231

Query: 189 243
           
Sbjct: 334 231

BLAST of WMU61400 vs. NCBI nr
Match: gi|449432046|ref|XP_004133811.1| (PREDICTED: uncharacterized protein LOC101209332 [Cucumis sativus])

HSP 1 Score: 75.9 bits (185), Expect = 3.7e-11
Identity = 49/74 (66.22%), Postives = 53/74 (71.62%), Query Frame = 3

Query: 30  DKRDDTANTASMQKEAMPLSEISSNA---INEMKGPNIL*RAKE*NRRALVHTIQHKKET 89
           DKRD+    ASMQKEAM LSEISSN    IN + GPNIL RAK+    ALVHTI  KKET
Sbjct: 160 DKRDEIV--ASMQKEAMLLSEISSNEKIPINGVMGPNILERAKD-EMEALVHTIHPKKET 219

Query: 90  DSPAKEGFLSKVRK 149
           DS AKEGFL K+ K
Sbjct: 220 DSLAKEGFLMKLGK 230

Query: 150 209
           
Sbjct: 280 230

Query: 210 243
           
Sbjct: 340 230

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659074979|ref|XP_008437898.1|2.8e-1465.43PREDICTED: uncharacterized protein LOC103483189 [Cucumis melo][more]
gi|449432046|ref|XP_004133811.1|3.7e-1166.22PREDICTED: uncharacterized protein LOC101209332 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla021158Cla021158gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0053285S2_0053285EST