WMU61335 (transcribed_cluster) Watermelon (97103) v1

NameWMU61335
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPropionyl-CoA carboxylase, putative
LocationChr5 : 1579385 .. 1579664 (+)
Sequence length282
The following sequences are available for this feature:

transcribed_cluster sequence

TGTTCGTAACATTCTAGACGGTGGCGTAAATTGCTCGCGGAGAATCGATCGCCATGGAAAGACCATATCGGATCTCATCTTGAACCAGCAAAATTGTTTTGCCACCATAGTCTGGTGGTTCACATAAAATCACACAGAAGAGATCTAAAATTTCTGAACCAGAAGGCTCTTCTAGGCAATAAAGTATCTTGCCTTCTGCCGTTGGATTACTTTACCTTGTAATTCTGAACTCCAACTTGTGCTTCTAATGCCTTCAAAATCTTTTGTCGGTCAAGTACGGAT
BLAST of WMU61335 vs. TAIR10
Match: AT1G01770.1 (AT1G01770.1 unknown protein)

HSP 1 Score: 60.8 bits (146), Expect = 5.0e-10
Identity = 29/30 (96.67%), Postives = 27/30 (90.00%), Query Frame = 2

Query: 2   VRNILDGGVNCSRRIDRHGKTISDLILNQQ 61
           VRNILDGGVNCSRRIDRHGKTISDLIL QQ
Sbjct: 599 VRNILDGGVNCSRRIDRHGKTISDLILCQQ 628

Query: 62  92
           
Sbjct: 659 628

BLAST of WMU61335 vs. NCBI nr
Match: gi|920718120|gb|KOM57317.1| (hypothetical protein LR48_Vigan11g035000 [Vigna angularis])

HSP 1 Score: 64.3 bits (155), Expect = 1.3e-07
Identity = 29/30 (96.67%), Postives = 30/30 (100.00%), Query Frame = 2

Query: 2   VRNILDGGVNCSRRIDRHGKTISDLILNQQ 61
           VRNILDGGVNCSRRIDRHGKTISDLIL+QQ
Sbjct: 612 VRNILDGGVNCSRRIDRHGKTISDLILSQQ 641

Query: 62  92
           
Sbjct: 672 641

BLAST of WMU61335 vs. NCBI nr
Match: gi|449433087|ref|XP_004134329.1| (PREDICTED: uncharacterized protein LOC101212841 [Cucumis sativus])

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-07
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 2

Query: 2   VRNILDGGVNCSRRIDRHGKTISDLILNQ 61
           VRNILDGGVNCSRRIDRHGKTISDLILNQ
Sbjct: 597 VRNILDGGVNCSRRIDRHGKTISDLILNQ 625

Query: 62  89
           
Sbjct: 657 625

BLAST of WMU61335 vs. NCBI nr
Match: gi|700201399|gb|KGN56532.1| (hypothetical protein Csa_3G122560 [Cucumis sativus])

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-07
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 2

Query: 2    VRNILDGGVNCSRRIDRHGKTISDLILNQ 61
            VRNILDGGVNCSRRIDRHGKTISDLILNQ
Sbjct: 1181 VRNILDGGVNCSRRIDRHGKTISDLILNQ 1209

Query: 62   89
            
Sbjct: 1241 1209

BLAST of WMU61335 vs. NCBI nr
Match: gi|659075289|ref|XP_008438065.1| (PREDICTED: uncharacterized protein LOC103483286 [Cucumis melo])

HSP 1 Score: 63.9 bits (154), Expect = 1.7e-07
Identity = 29/29 (100.00%), Postives = 29/29 (100.00%), Query Frame = 2

Query: 2   VRNILDGGVNCSRRIDRHGKTISDLILNQ 61
           VRNILDGGVNCSRRIDRHGKTISDLILNQ
Sbjct: 597 VRNILDGGVNCSRRIDRHGKTISDLILNQ 625

Query: 62  89
           
Sbjct: 657 625

BLAST of WMU61335 vs. NCBI nr
Match: gi|604329919|gb|EYU35076.1| (hypothetical protein MIMGU_mgv1a002868mg [Erythranthe guttata])

HSP 1 Score: 63.2 bits (152), Expect = 2.8e-07
Identity = 26/30 (86.67%), Postives = 30/30 (100.00%), Query Frame = 2

Query: 2   VRNILDGGVNCSRRIDRHGKTISDLILNQQ 61
           VRN+LDGGVNCSRRIDRHGKT+SDL+L+QQ
Sbjct: 595 VRNVLDGGVNCSRRIDRHGKTVSDLVLSQQ 624

Query: 62  92
           
Sbjct: 655 624

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G01770.15.0e-1096.67 unknown protein[more]
Match NameE-valueIdentityDescription
gi|920718120|gb|KOM57317.1|1.3e-0796.67hypothetical protein LR48_Vigan11g035000 [Vigna angularis][more]
gi|449433087|ref|XP_004134329.1|1.7e-07100.00PREDICTED: uncharacterized protein LOC101212841 [Cucumis sativus][more]
gi|700201399|gb|KGN56532.1|1.7e-07100.00hypothetical protein Csa_3G122560 [Cucumis sativus][more]
gi|659075289|ref|XP_008438065.1|1.7e-07100.00PREDICTED: uncharacterized protein LOC103483286 [Cucumis melo][more]
gi|604329919|gb|EYU35076.1|2.8e-0786.67hypothetical protein MIMGU_mgv1a002868mg [Erythranthe guttata][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla021248Cla021248gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0052268S2_0052268EST