WMU61094 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU61094
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionMitogen-activated protein kinase
LocationChr8 : 19463113 .. 19463233 (+)
Sequence length123
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GTTGAAGATGCTCTTGCTCATCCTTATTTGACTTCATTGCATGACATTAGTGATGAGCCTGTCTGCATGACACCCTTCAGCTTTTGTATTTCGTAGCAGCATGCGCTTACCGAGGAACAGATG
Homology
[Close]
BLAST of WMU61094 vs. TAIR10
Match: AT2G43790.1 (AT2G43790.1 MAP kinase 6)

HSP 1 Score: 58.5 bits (140), Expect = 1.1e-09
Identity = 29/41 (70.73%), Postives = 29/41 (70.73%), Query Frame = 1 

Query: 1   VEDALAHPYLTSLHDISDEPVCMTPFSFCIS*QHALTEEQM 60
           V DALAHPYL SLHDISDEP C  PF+F     HAL+EEQM
Sbjct: 339 VLDALAHPYLNSLHDISDEPECTIPFNFDFE-NHALSEEQM 378

Query: 61   120
           
Sbjct: 399  378

Query: 121  124
           
Sbjct: 459  378

[Close]
BLAST of WMU61094 vs. TAIR10
Match: AT3G59790.1 (AT3G59790.1 MAP kinase 10)

HSP 1 Score: 52.4 bits (124), Expect = 7.8e-08
Identity = 23/40 (57.50%), Postives = 29/40 (72.50%), Query Frame = 1 

Query: 1   VEDALAHPYLTSLHDISDEPVCMTPFSFCIS*QHALTEEQ 60
           V++ALAHPYL+S HDI+DEP C  PF+F +  +H  +EEQ
Sbjct: 336 VKEALAHPYLSSFHDITDEPECSEPFNFDLD-EHPFSEEQ 374

Query: 61   120
           
Sbjct: 396  374

[Close]
BLAST of WMU61094 vs. TAIR10
Match: AT4G01370.1 (AT4G01370.1 MAP kinase 4)

HSP 1 Score: 50.4 bits (119), Expect = 3.0e-07
Identity = 23/41 (56.10%), Postives = 28/41 (68.29%), Query Frame = 1 

Query: 1   VEDALAHPYLTSLHDISDEPVCMTPFSFCIS*QHALTEEQM 60
           V++AL HPYL  LHDI++EPVC+ PF+F    Q  LTEE +
Sbjct: 320 VDEALCHPYLAPLHDINEEPVCVRPFNFDFE-QPTLTEENI 359

Query: 61   120
           
Sbjct: 380  359

Query: 121  124
           
Sbjct: 440  359

[Close]
BLAST of WMU61094 vs. TAIR10
Match: AT1G01560.2 (AT1G01560.2 MAP kinase 11)

HSP 1 Score: 46.6 bits (109), Expect = 4.3e-06
Identity = 21/41 (51.22%), Postives = 27/41 (65.85%), Query Frame = 1 

Query: 1   VEDALAHPYLTSLHDISDEPVCMTPFSFCIS*QHALTEEQM 60
           V++AL HPYL  LH+ ++EPVC+ PF F    Q +LTEE +
Sbjct: 317 VDEALCHPYLAPLHEYNEEPVCVRPFHFDFE-QPSLTEENI 356

Query: 61   120
           
Sbjct: 377  356

Query: 121  124
           
Sbjct: 437  356

[Close]
BLAST of WMU61094 vs. TAIR10
Match: AT3G45640.1 (AT3G45640.1 mitogen-activated protein kinase 3)

HSP 1 Score: 46.2 bits (108), Expect = 5.6e-06
Identity = 23/41 (56.10%), Postives = 24/41 (58.54%), Query Frame = 1 

Query: 1   VEDALAHPYLTSLHDISDEPVCMTPFSFCIS*QHALTEEQM 60
           VE AL H YL  LHD +DEP+C  PFSF    Q  L EEQ+
Sbjct: 315 VEQALNHQYLAKLHDPNDEPICQKPFSFEFE-QQPLDEEQI 354

Query: 61   120
           
Sbjct: 375  354

Query: 121  124
           
Sbjct: 435  354

[Close]
BLAST of WMU61094 vs. Swiss-Prot
Match: MMK1_MEDSA (Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa GN=MMK1 PE=1 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 2.0e-13
Identity = 37/41 (90.24%), Postives = 35/41 (85.37%), Query Frame = 1 

Query: 1   VEDALAHPYLTSLHDISDEPVCMTPFSFCIS*QHALTEEQM 60
           VEDALAHPYLTSLHDISDEPVCMTPFSF    QHALTEEQM
Sbjct: 331 VEDALAHPYLTSLHDISDEPVCMTPFSFDFE-QHALTEEQM 370

Query: 61   120
           
Sbjct: 391  370

Query: 121  124
           
Sbjct: 451  370

[Close]
BLAST of WMU61094 vs. Swiss-Prot
Match: NTF4_TOBAC (Mitogen-activated protein kinase homolog NTF4 OS=Nicotiana tabacum GN=NTF4 PE=2 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 4.4e-13
Identity = 36/41 (87.80%), Postives = 35/41 (85.37%), Query Frame = 1 

Query: 1   VEDALAHPYLTSLHDISDEPVCMTPFSFCIS*QHALTEEQM 60
           VEDALAHPYLTSLHDISDEPVCMTPF+F    QHALTEEQM
Sbjct: 336 VEDALAHPYLTSLHDISDEPVCMTPFNFDFE-QHALTEEQM 375

Query: 61   120
           
Sbjct: 396  375

Query: 121  124
           
Sbjct: 456  375

[Close]
BLAST of WMU61094 vs. Swiss-Prot
Match: MPK_PEA (Mitogen-activated protein kinase homolog D5 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.8e-12
Identity = 35/41 (85.37%), Postives = 34/41 (82.93%), Query Frame = 1 

Query: 1   VEDALAHPYLTSLHDISDEPVCMTPFSFCIS*QHALTEEQM 60
           VE+ALAHPYLTSLHDISDEPVC TPFSF    QHALTEEQM
Sbjct: 338 VENALAHPYLTSLHDISDEPVCTTPFSFDFE-QHALTEEQM 377

Query: 61   120
           
Sbjct: 398  377

Query: 121  124
           
Sbjct: 458  377

[Close]
BLAST of WMU61094 vs. Swiss-Prot
Match: MPK1_ORYSJ (Mitogen-activated protein kinase 1 OS=Oryza sativa subsp. japonica GN=MPK1 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 2.1e-10
Identity = 32/41 (78.05%), Postives = 32/41 (78.05%), Query Frame = 1 

Query: 1   VEDALAHPYLTSLHDISDEPVCMTPFSFCIS*QHALTEEQM 60
           VE ALAHPYL SLHDISDEPVC +PFSF    QHAL+EEQM
Sbjct: 343 VEGALAHPYLASLHDISDEPVCSSPFSFDFE-QHALSEEQM 382

Query: 61   120
           
Sbjct: 403  382

Query: 121  124
           
Sbjct: 463  382

[Close]
BLAST of WMU61094 vs. Swiss-Prot
Match: MPK6_ARATH (Mitogen-activated protein kinase 6 OS=Arabidopsis thaliana GN=MPK6 PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.9e-08
Identity = 29/41 (70.73%), Postives = 29/41 (70.73%), Query Frame = 1 

Query: 1   VEDALAHPYLTSLHDISDEPVCMTPFSFCIS*QHALTEEQM 60
           V DALAHPYL SLHDISDEP C  PF+F     HAL+EEQM
Sbjct: 339 VLDALAHPYLNSLHDISDEPECTIPFNFDFE-NHALSEEQM 378

Query: 61   120
           
Sbjct: 399  378

Query: 121  124
           
Sbjct: 459  378

[Close]
BLAST of WMU61094 vs. NCBI nr
Match: gi|7649153|gb|AAF65766.1|AF242308_1 (mitogen-activated protein kinase [Euphorbia esula])

HSP 1 Score: 76.3 bits (186), Expect = 1.4e-11
Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 1 

Query: 1   VEDALAHPYLTSLHDISDEPVCMTPFSFCIS*QHALTEEQM 60
           VEDALAHPYLTSLHDISDEPVCMTPFSF    QHALTEEQM
Sbjct: 332 VEDALAHPYLTSLHDISDEPVCMTPFSFDFE-QHALTEEQM 371

Query: 61   120
           
Sbjct: 392  371

Query: 121  124
           
Sbjct: 452  371

[Close]
BLAST of WMU61094 vs. NCBI nr
Match: gi|645275921|ref|XP_008243044.1| (PREDICTED: mitogen-activated protein kinase homolog MMK1 [Prunus mume])

HSP 1 Score: 76.3 bits (186), Expect = 1.4e-11
Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 1 

Query: 1   VEDALAHPYLTSLHDISDEPVCMTPFSFCIS*QHALTEEQM 60
           VEDALAHPYLTSLHDISDEPVCMTPFSF    QHALTEEQM
Sbjct: 350 VEDALAHPYLTSLHDISDEPVCMTPFSFDFE-QHALTEEQM 389

Query: 61   120
           
Sbjct: 410  389

Query: 121  124
           
Sbjct: 470  389

[Close]
BLAST of WMU61094 vs. NCBI nr
Match: gi|595804546|ref|XP_007202173.1| (hypothetical protein PRUPE_ppa006536mg [Prunus persica])

HSP 1 Score: 76.3 bits (186), Expect = 1.4e-11
Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 1 

Query: 1   VEDALAHPYLTSLHDISDEPVCMTPFSFCIS*QHALTEEQM 60
           VEDALAHPYLTSLHDISDEPVCMTPFSF    QHALTEEQM
Sbjct: 350 VEDALAHPYLTSLHDISDEPVCMTPFSFDFE-QHALTEEQM 389

Query: 61   120
           
Sbjct: 410  389

Query: 121  124
           
Sbjct: 470  389

[Close]
BLAST of WMU61094 vs. NCBI nr
Match: gi|350538693|ref|NP_001234355.1| (mitogen-activated protein kinase 2 [Solanum lycopersicum])

HSP 1 Score: 76.3 bits (186), Expect = 1.4e-11
Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 1 

Query: 1   VEDALAHPYLTSLHDISDEPVCMTPFSFCIS*QHALTEEQM 60
           VEDALAHPYLTSLHDISDEPVCMTPFSF    QHALTEEQM
Sbjct: 337 VEDALAHPYLTSLHDISDEPVCMTPFSFDFE-QHALTEEQM 376

Query: 61   120
           
Sbjct: 397  376

Query: 121  124
           
Sbjct: 457  376

[Close]
BLAST of WMU61094 vs. NCBI nr
Match: gi|659089394|ref|XP_008445483.1| (PREDICTED: mitogen-activated protein kinase homolog MMK1 isoform X1 [Cucumis melo])

HSP 1 Score: 76.3 bits (186), Expect = 1.4e-11
Identity = 37/41 (90.24%), Postives = 37/41 (90.24%), Query Frame = 1 

Query: 1   VEDALAHPYLTSLHDISDEPVCMTPFSFCIS*QHALTEEQM 60
           VEDALAHPYLTSLHDISDEPVCMTPFSF    QHALTEEQM
Sbjct: 348 VEDALAHPYLTSLHDISDEPVCMTPFSFDFE-QHALTEEQM 387

Query: 61   120
           
Sbjct: 408  387

Query: 121  124
           
Sbjct: 468  387

The following BLAST results are available for this feature:
BLAST of WMU61094 vs. TAIR10
Match NameE-valueIdentityDescription
AT2G43790.11.1e-0970.73 MAP kinase 6[more]
AT3G59790.17.8e-0857.50 MAP kinase 10[more]
AT4G01370.13.0e-0756.10 MAP kinase 4[more]
AT1G01560.24.3e-0651.22 MAP kinase 11[more]
AT3G45640.15.6e-0656.10 mitogen-activated protein kinase 3[more]
BLAST of WMU61094 vs. Swiss-Prot
Match NameE-valueIdentityDescription
MMK1_MEDSA2.0e-1390.24Mitogen-activated protein kinase homolog MMK1 OS=Medicago sativa GN=MMK1 PE=1 SV... [more]
NTF4_TOBAC4.4e-1387.80Mitogen-activated protein kinase homolog NTF4 OS=Nicotiana tabacum GN=NTF4 PE=2 ... [more]
MPK_PEA3.8e-1285.37Mitogen-activated protein kinase homolog D5 OS=Pisum sativum PE=2 SV=1[more]
MPK1_ORYSJ2.1e-1078.05Mitogen-activated protein kinase 1 OS=Oryza sativa subsp. japonica GN=MPK1 PE=1 ... [more]
MPK6_ARATH1.9e-0870.73Mitogen-activated protein kinase 6 OS=Arabidopsis thaliana GN=MPK6 PE=1 SV=1[more]
BLAST of WMU61094 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|7649153|gb|AAF65766.1|AF242308_11.4e-1190.24mitogen-activated protein kinase [Euphorbia esula][more]
gi|645275921|ref|XP_008243044.1|1.4e-1190.24PREDICTED: mitogen-activated protein kinase homolog MMK1 [Prunus mume][more]
gi|595804546|ref|XP_007202173.1|1.4e-1190.24hypothetical protein PRUPE_ppa006536mg [Prunus persica][more]
gi|350538693|ref|NP_001234355.1|1.4e-1190.24mitogen-activated protein kinase 2 [Solanum lycopersicum][more]
gi|659089394|ref|XP_008445483.1|1.4e-1190.24PREDICTED: mitogen-activated protein kinase homolog MMK1 isoform X1 [Cucumis mel... [more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla022003Cla022003gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0048038S2_0048038EST