WMU58887 (transcribed_cluster) Watermelon (97103) v1

NameWMU58887
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr1 : 30053851 .. 30054028 (+)
Sequence length176
The following sequences are available for this feature:

transcribed_cluster sequence

CGGCAGACGCTGCGAATCGGAGGACGTCGATGTAGGTGTCGAGGCGTTTACCGATGATTGGCCAAAGTTCAGGAGGAAGATCGGACCACCGTACACGGCTGTCTTCCATGGCGGAGGCTTGACTTGAATCCGATTGGTCCAACAGAGAGACGATAAGGAGAAGAGTAGCAGTGGAT
BLAST of WMU58887 vs. NCBI nr
Match: gi|778719846|ref|XP_004134837.2| (PREDICTED: putative F-box protein At1g65770 [Cucumis sativus])

HSP 1 Score: 73.9 bits (180), Expect = 1.0e-10
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = -2

Query: 14  MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRF 73
           MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRF
Sbjct: 1   MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRF 32

Query: 74  110
           
Sbjct: 61  32

BLAST of WMU58887 vs. NCBI nr
Match: gi|659081066|ref|XP_008441132.1| (PREDICTED: F-box protein At2g17036 [Cucumis melo])

HSP 1 Score: 73.9 bits (180), Expect = 1.0e-10
Identity = 32/32 (100.00%), Postives = 32/32 (100.00%), Query Frame = -2

Query: 14  MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRF 73
           MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRF
Sbjct: 1   MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRF 32

Query: 74  110
           
Sbjct: 61  32

BLAST of WMU58887 vs. NCBI nr
Match: gi|449434450|ref|XP_004135009.1| (PREDICTED: putative F-box protein At1g65770 [Cucumis sativus])

HSP 1 Score: 65.9 bits (159), Expect = 2.7e-08
Identity = 26/32 (81.25%), Postives = 30/32 (93.75%), Query Frame = -2

Query: 14  MEDSRVRWSDLPPELWPIIGKRLDTYIDVLRF 73
           ME SRVRWSDLPP+LWP+IGKRLD YID++RF
Sbjct: 1   MEKSRVRWSDLPPQLWPLIGKRLDNYIDIVRF 32

Query: 74  110
           
Sbjct: 61  32

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|778719846|ref|XP_004134837.2|1.0e-10100.00PREDICTED: putative F-box protein At1g65770 [Cucumis sativus][more]
gi|659081066|ref|XP_008441132.1|1.0e-10100.00PREDICTED: F-box protein At2g17036 [Cucumis melo][more]
gi|449434450|ref|XP_004135009.1|2.7e-0881.25PREDICTED: putative F-box protein At1g65770 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla014331Cla014331gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0007237S2_0007237EST