WMU58185 (transcribed_cluster) Watermelon (97103) v1

NameWMU58185
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr8 : 15504720 .. 15505138 (+)
Sequence length417
The following sequences are available for this feature:

transcribed_cluster sequence

AAAATCCACCGTTATCGACGCTTTTACTTTCTGGTAACAAGTGCCCTAGTTTCACTCCGGTTCTTGCTACGGTCTCTTCGGAAGGAAGTTTCAGAGCTGGAATCGTCTCTTGAAAGGGAAGCAGCGTCACCGTCTTGTTGACGTTTCGAATTAGTCAAGTGATGTTCAACGAGATCTTTGAGAGAGAGCTCGTAAGATGATTCGGGCATGTTCCTGACCATCTCCATGAGCTCCTGTTGGCCTCTGGCTATGGCTTGGGTTCGGGAAGTTGGGGAGAGGCTGCGATTACGAGGGCGGTGAAATTGGGGCTGGTTCGAGAATTGGAACCCCAAAGCGTGGGTGAACAAACCCCGATTCCGATTGAGAGTCATCGTCGACGGCAGCAGCACTGTCCCAGCCTCTGAAAATGATGCAATC
BLAST of WMU58185 vs. TAIR10
Match: AT1G21390.1 (AT1G21390.1 embryo defective 2170)

HSP 1 Score: 70.9 bits (172), Expect = 7.1e-13
Identity = 37/49 (75.51%), Postives = 38/49 (77.55%), Query Frame = -2

Query: 165 PQFHRPRNR-SLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVE 224
           P FHRP +  SLSP S+ QAIARGQ+ELMEMV  MPES YELSLKDLVE
Sbjct: 44  PPFHRPEDYWSLSPDSKAQAIARGQRELMEMVSKMPESCYELSLKDLVE 92

Query: 225 284
           
Sbjct: 104 92

Query: 285 309
           
Sbjct: 164 92

BLAST of WMU58185 vs. TAIR10
Match: AT1G76980.1 (AT1G76980.1 BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1))

HSP 1 Score: 59.7 bits (143), Expect = 1.6e-09
Identity = 29/47 (61.70%), Postives = 34/47 (72.34%), Query Frame = -2

Query: 144 RSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSK 203
           ++LSP ++ Q IARGQ+ELM+MV  MPES YELSLKDLVE +    K
Sbjct: 51  QNLSPVTKAQVIARGQRELMDMVSKMPESCYELSLKDLVEVNTEEEK 97

Query: 204 263
           
Sbjct: 111 97

Query: 264 285
           
Sbjct: 171 97

BLAST of WMU58185 vs. NCBI nr
Match: gi|659081933|ref|XP_008441584.1| (PREDICTED: uncharacterized protein LOC103485667 [Cucumis melo])

HSP 1 Score: 130.2 bits (326), Expect = 2.8e-27
Identity = 70/93 (75.27%), Postives = 70/93 (75.27%), Query Frame = -2

Query: 30  PQFHRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQDG 89
           PQFHR RNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQDG
Sbjct: 67  PQFHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQDG 126

Query: 90  XXXXXXXXXXXXXXXXXXXXXKNRSETRALVTR 149
                                KNR ETRALVTR
Sbjct: 127 AVASLSRDDSSSETSFRRDPSKNRGETRALVTR 159

Query: 150 209
           
Sbjct: 187 159

Query: 210 269
           
Sbjct: 247 159

Query: 270 309
           
Sbjct: 307 159

BLAST of WMU58185 vs. NCBI nr
Match: gi|449453013|ref|XP_004144253.1| (PREDICTED: uncharacterized protein LOC101219576 [Cucumis sativus])

HSP 1 Score: 125.6 bits (314), Expect = 6.9e-26
Identity = 70/94 (74.47%), Postives = 70/94 (74.47%), Query Frame = -2

Query: 30  PQFH-RPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQD 89
           PQFH R RNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQD
Sbjct: 62  PQFHHRHRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHLTNSKRQQD 121

Query: 90  GXXXXXXXXXXXXXXXXXXXXXKNRSETRALVTR 149
           G                     KNR ETRALVTR
Sbjct: 122 GDVASLTRDDSSSETSFRRDPSKNRGETRALVTR 155

Query: 150 209
           
Sbjct: 182 155

Query: 210 269
           
Sbjct: 242 155

Query: 270 309
           
Sbjct: 302 155

BLAST of WMU58185 vs. NCBI nr
Match: gi|947116285|gb|KRH64587.1| (hypothetical protein GLYMA_04G243500 [Glycine max])

HSP 1 Score: 79.3 bits (194), Expect = 5.7e-12
Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = -2

Query: 156 SNQPQFHRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHHL 215
           +  P   +  +RSLSPTSRTQAI RGQ+ELMEMV+NMPES+YELSLKDLVEHH+
Sbjct: 57  TTSPPRRKNNHRSLSPTSRTQAIVRGQRELMEMVKNMPESNYELSLKDLVEHHM 110

Query: 216 275
           
Sbjct: 117 110

Query: 276 318
           
Sbjct: 177 110

BLAST of WMU58185 vs. NCBI nr
Match: gi|951059060|ref|XP_014522319.1| (PREDICTED: uncharacterized protein LOC106778838 [Vigna radiata var. radiata])

HSP 1 Score: 79.0 bits (193), Expect = 7.4e-12
Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = -2

Query: 159 FSNQPQFHRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHH 218
           ++  P   +  +RSLSPTSRTQAI RGQ+ELMEMV+NMPES+YELSLKDLVEHH
Sbjct: 57  WTTSPPHSKTDHRSLSPTSRTQAIVRGQRELMEMVKNMPESNYELSLKDLVEHH 110

Query: 219 278
           
Sbjct: 117 110

Query: 279 321
           
Sbjct: 177 110

BLAST of WMU58185 vs. NCBI nr
Match: gi|920698265|gb|KOM41490.1| (hypothetical protein LR48_Vigan04g168800 [Vigna angularis])

HSP 1 Score: 79.0 bits (193), Expect = 7.4e-12
Identity = 39/54 (72.22%), Postives = 46/54 (85.19%), Query Frame = -2

Query: 159 FSNQPQFHRPRNRSLSPTSRTQAIARGQQELMEMVRNMPESSYELSLKDLVEHH 218
           ++  P   +  +RSLSPTSRTQAI RGQ+ELMEMV+NMPES+YELSLKDLVEHH
Sbjct: 57  WTTSPPHSKTDHRSLSPTSRTQAIVRGQRELMEMVKNMPESTYELSLKDLVEHH 110

Query: 219 278
           
Sbjct: 117 110

Query: 279 321
           
Sbjct: 177 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G21390.17.1e-1375.51 embryo defective 2170[more]
AT1G76980.11.6e-0961.70 BEST Arabidopsis thaliana protein match is: embryo defective 2170 (T... [more]
Match NameE-valueIdentityDescription
gi|659081933|ref|XP_008441584.1|2.8e-2775.27PREDICTED: uncharacterized protein LOC103485667 [Cucumis melo][more]
gi|449453013|ref|XP_004144253.1|6.9e-2674.47PREDICTED: uncharacterized protein LOC101219576 [Cucumis sativus][more]
gi|947116285|gb|KRH64587.1|5.7e-1272.22hypothetical protein GLYMA_04G243500 [Glycine max][more]
gi|951059060|ref|XP_014522319.1|7.4e-1272.22PREDICTED: uncharacterized protein LOC106778838 [Vigna radiata var. radiata][more]
gi|920698265|gb|KOM41490.1|7.4e-1272.22hypothetical protein LR48_Vigan04g168800 [Vigna angularis][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla013881Cla013881gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0156754S1_0156754EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34193FAMILY NOT NAMEDcoord: 45..95
score: 2.0
NoneNo IPR availablePANTHERPTHR34193:SF1SUBFAMILY NOT NAMEDcoord: 45..95
score: 2.0