WMU57138 (transcribed_cluster) Watermelon (97103) v1

NameWMU57138
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionRhodanese-like domain-containing protein
LocationChr1 : 18100933 .. 18101277 (-)
Sequence length344
The following sequences are available for this feature:

transcribed_cluster sequence

CCTCTTCGAATGCTTGAATTGGACCATGGACTGATCAACTGCCCTTCACTTCACATATTTGGTAGTGATCAGGGAAACGATAGGCAGATTGCTAACAAAACGAGCAGAGAACTTGCTTCTTGTTTTGATGCAGGTTGTTCTGTGATTATCGAACACGACTGTGGTCACATAATCCCTACTCGACCTCCCTACATTGACGAGATAAAAGAGTTCCTTCAACGTTTTCTTTGGTTGGATTCATGAGTGTAACCTACAAGCATTGAAGTTTTTAGAGAGCTTGATCATACAAGGGATTATTTTTTATTTCTCGAAGAAAACGTTGGTTCACTCTTGGATTGTAACGG
BLAST of WMU57138 vs. TAIR10
Match: AT1G09280.1 (AT1G09280.1 Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR005645))

HSP 1 Score: 93.6 bits (231), Expect = 8.5e-20
Identity = 44/77 (57.14%), Postives = 54/77 (70.13%), Query Frame = 1

Query: 1   PLRMLEL-DHGLINCPSLHIFGSDQGNDRQIANKTSRELASCFDAGCSVIIEHDCGHIIP 60
           P  +LE+ +   I CPSLHIFGS  G DRQI  + S +LA  F+ GC+ I+EHD GHIIP
Sbjct: 505 PWPLLEMKEKRSIKCPSLHIFGSQPGKDRQIVTQASSDLAGLFEDGCATIVEHDFGHIIP 564

Query: 61  TRPPYIDEIKEFLQRFL 120
           T+ PYIDEIK FL +F+
Sbjct: 565 TKSPYIDEIKAFLYQFI 581

Query: 121 180
           
Sbjct: 625 581

Query: 181 229
           
Sbjct: 685 581

BLAST of WMU57138 vs. Swiss-Prot
Match: STR6_ARATH (Rhodanese-like domain-containing protein 6 OS=Arabidopsis thaliana GN=STR6 PE=2 SV=1)

HSP 1 Score: 93.6 bits (231), Expect = 1.5e-18
Identity = 44/77 (57.14%), Postives = 54/77 (70.13%), Query Frame = 1

Query: 1   PLRMLEL-DHGLINCPSLHIFGSDQGNDRQIANKTSRELASCFDAGCSVIIEHDCGHIIP 60
           P  +LE+ +   I CPSLHIFGS  G DRQI  + S +LA  F+ GC+ I+EHD GHIIP
Sbjct: 505 PWPLLEMKEKRSIKCPSLHIFGSQPGKDRQIVTQASSDLAGLFEDGCATIVEHDFGHIIP 564

Query: 61  TRPPYIDEIKEFLQRFL 120
           T+ PYIDEIK FL +F+
Sbjct: 565 TKSPYIDEIKAFLYQFI 581

Query: 121 180
           
Sbjct: 625 581

Query: 181 229
           
Sbjct: 685 581

BLAST of WMU57138 vs. NCBI nr
Match: gi|778659683|ref|XP_011654855.1| (PREDICTED: rhodanese-like domain-containing protein 6 isoform X1 [Cucumis sativus])

HSP 1 Score: 151.8 bits (382), Expect = 7.5e-34
Identity = 70/76 (92.11%), Postives = 71/76 (93.42%), Query Frame = 1

Query: 1   PLRMLELDHGLINCPSLHIFGSDQGNDRQIANKTSRELASCFDAGCSVIIEHDCGHIIPT 60
           PL+M ELD GLINCPSLHIFGSD GNDRQIANKTSR LASCFDAGCSVIIEHD GHIIPT
Sbjct: 534 PLQMPELDRGLINCPSLHIFGSDGGNDRQIANKTSRNLASCFDAGCSVIIEHDLGHIIPT 593

Query: 61  RPPYIDEIKEFLQRFL 120
           RPPYIDEIKEFLQRFL
Sbjct: 594 RPPYIDEIKEFLQRFL 609

Query: 121 180
           
Sbjct: 654 609

Query: 181 229
           
Sbjct: 714 609

BLAST of WMU57138 vs. NCBI nr
Match: gi|659128662|ref|XP_008464312.1| (PREDICTED: rhodanese-like domain-containing protein 6 isoform X1 [Cucumis melo])

HSP 1 Score: 146.4 bits (368), Expect = 3.1e-32
Identity = 67/76 (88.16%), Postives = 70/76 (92.11%), Query Frame = 1

Query: 1   PLRMLELDHGLINCPSLHIFGSDQGNDRQIANKTSRELASCFDAGCSVIIEHDCGHIIPT 60
           PL+M ELD GLINCPSLHIFGS  GNDRQIANKTSR LASCFDAGCSVIIEHD GH+IPT
Sbjct: 526 PLQMPELDRGLINCPSLHIFGSGGGNDRQIANKTSRNLASCFDAGCSVIIEHDLGHMIPT 585

Query: 61  RPPYIDEIKEFLQRFL 120
           RPPYID+IKEFLQRFL
Sbjct: 586 RPPYIDKIKEFLQRFL 601

Query: 121 180
           
Sbjct: 646 601

Query: 181 229
           
Sbjct: 706 601

BLAST of WMU57138 vs. NCBI nr
Match: gi|703089848|ref|XP_010093919.1| (hypothetical protein L484_005601 [Morus notabilis])

HSP 1 Score: 130.6 bits (327), Expect = 1.8e-27
Identity = 60/75 (80.00%), Postives = 64/75 (85.33%), Query Frame = 1

Query: 4   LRMLELDHGLINCPSLHIFGSDQGNDRQIANKTSRELASCFDAGCSVIIEHDCGHIIPTR 63
           L + ELD GLI CPSLHIFGSD G DRQIANK SRELAS FD GCSV+I+HD GHIIPTR
Sbjct: 552 LNLPELDGGLIQCPSLHIFGSDDGKDRQIANKASRELASLFDDGCSVVIQHDSGHIIPTR 611

Query: 64  PPYIDEIKEFLQRFL 123
            PYID+IKEFLQRFL
Sbjct: 612 SPYIDQIKEFLQRFL 626

Query: 124 183
           
Sbjct: 672 626

Query: 184 229
           
Sbjct: 732 626

BLAST of WMU57138 vs. NCBI nr
Match: gi|703095518|ref|XP_010095559.1| (hypothetical protein L484_007274 [Morus notabilis])

HSP 1 Score: 130.6 bits (327), Expect = 1.8e-27
Identity = 60/75 (80.00%), Postives = 64/75 (85.33%), Query Frame = 1

Query: 4   LRMLELDHGLINCPSLHIFGSDQGNDRQIANKTSRELASCFDAGCSVIIEHDCGHIIPTR 63
           L + ELD GLI CPSLHIFGSD G DRQIANK SRELAS FD GCSV+I+HD GHIIPTR
Sbjct: 535 LNLPELDGGLIQCPSLHIFGSDDGKDRQIANKASRELASLFDDGCSVVIQHDSGHIIPTR 594

Query: 64  PPYIDEIKEFLQRFL 123
            PYID+IKEFLQRFL
Sbjct: 595 SPYIDQIKEFLQRFL 609

Query: 124 183
           
Sbjct: 655 609

Query: 184 229
           
Sbjct: 715 609

BLAST of WMU57138 vs. NCBI nr
Match: gi|641862954|gb|KDO81641.1| (hypothetical protein CISIN_1g007311mg [Citrus sinensis])

HSP 1 Score: 127.1 bits (318), Expect = 2.0e-26
Identity = 56/75 (74.67%), Postives = 61/75 (81.33%), Query Frame = 1

Query: 4   LRMLELDHGLINCPSLHIFGSDQGNDRQIANKTSRELASCFDAGCSVIIEHDCGHIIPTR 63
           L   E +H  INCPSLHIFG D GNDRQ+AN+ S+ELA  F+ GCSVIIEHDCGHIIPTR
Sbjct: 534 LHSAEFEHRSINCPSLHIFGGDLGNDRQVANQASKELAKAFEEGCSVIIEHDCGHIIPTR 593

Query: 64  PPYIDEIKEFLQRFL 123
            PYIDEIK FLQRFL
Sbjct: 594 SPYIDEIKSFLQRFL 608

Query: 124 183
           
Sbjct: 654 608

Query: 184 229
           
Sbjct: 714 608

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT1G09280.18.5e-2057.14 Rhodanese-like (InterPro:IPR001763), Serine hydrolase (InterPro:IPR0... [more]
Match NameE-valueIdentityDescription
STR6_ARATH1.5e-1857.14Rhodanese-like domain-containing protein 6 OS=Arabidopsis thaliana GN=STR6 PE=2 ... [more]
Match NameE-valueIdentityDescription
gi|778659683|ref|XP_011654855.1|7.5e-3492.11PREDICTED: rhodanese-like domain-containing protein 6 isoform X1 [Cucumis sativu... [more]
gi|659128662|ref|XP_008464312.1|3.1e-3288.16PREDICTED: rhodanese-like domain-containing protein 6 isoform X1 [Cucumis melo][more]
gi|703089848|ref|XP_010093919.1|1.8e-2780.00hypothetical protein L484_005601 [Morus notabilis][more]
gi|703095518|ref|XP_010095559.1|1.8e-2780.00hypothetical protein L484_007274 [Morus notabilis][more]
gi|641862954|gb|KDO81641.1|2.0e-2674.67hypothetical protein CISIN_1g007311mg [Citrus sinensis][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR005645FSH_dom

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla010987Cla010987gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0141958S1_0141958EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005645Serine hydrolase FSHPFAMPF03959FSH1coord: 11..67
score: 6.
NoneNo IPR availablePANTHERPTHR22778OVARIAN CANCER GENE-2 PROTEIN-RELATEDcoord: 6..76
score: 2.1
NoneNo IPR availablePANTHERPTHR22778:SF0OVARIAN CANCER-ASSOCIATED GENE 2 PROTEINcoord: 6..76
score: 2.1