WMU56769 (transcribed_cluster) Watermelon (97103) v1

NameWMU56769
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPectinesterase
LocationChr5 : 2205502 .. 2205785 (+)
Sequence length288
The following sequences are available for this feature:

transcribed_cluster sequence

GAAGAAAGAAATGGGAAGGCATTCGACAACCTTTGTTGTTGTTCTTATTGTTCTTCTTATTCCGACCGAGATTTTTTGTTATTCCGAAAAAGAAATAAAACGTTGGTGTAGCCAAACGCCATAATCCAGCTCCATGTGAGGAATTTCTCAAAACCAAAGCCTTAACAAACAAATCTCCAATAGTCAATAAATCCCATTTCTTTGAAATCTTAGTCCAAACGGCACTCGAACGTGCCGTTTCGGCCCCATAAAAACGCTCTTTCTCTCGGCCCAAAATGCCGAAATAGT
BLAST of WMU56769 vs. NCBI nr
Match: gi|449432283|ref|XP_004133929.1| (PREDICTED: pectinesterase 2 [Cucumis sativus])

HSP 1 Score: 72.8 bits (177), Expect = 3.7e-10
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = 3

Query: 126 PAPCEEFLKTKALTNKSPIVNKSHFFEILVQTALERAVSA 185
           PAPCEEFLKTKA T K+PI  KSHFFEILV+TALERAVSA
Sbjct: 39  PAPCEEFLKTKATTKKTPITTKSHFFEILVETALERAVSA 78

Query: 186 245
           
Sbjct: 99  78

BLAST of WMU56769 vs. NCBI nr
Match: gi|659075527|ref|XP_008438193.1| (PREDICTED: pectinesterase 2 [Cucumis melo])

HSP 1 Score: 68.9 bits (167), Expect = 5.3e-09
Identity = 35/41 (85.37%), Postives = 36/41 (87.80%), Query Frame = 3

Query: 126 PAPCEEFLKTKALTNKS-PIVNKSHFFEILVQTALERAVSA 185
           PAPCEEFLKTKA T KS PI  KSHFFEILV+TALERAVSA
Sbjct: 39  PAPCEEFLKTKASTKKSTPITTKSHFFEILVETALERAVSA 79

Query: 186 245
           
Sbjct: 99  79

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|449432283|ref|XP_004133929.1|3.7e-1085.00PREDICTED: pectinesterase 2 [Cucumis sativus][more]
gi|659075527|ref|XP_008438193.1|5.3e-0985.37PREDICTED: pectinesterase 2 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla021325Cla021325gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0136550S1_0136550EST