WMU52788 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU52788
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionBTB/POZ domain-containing protein
LocationChr1 : 1443391 .. 1443488 (+)
Sequence length130
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

TCAGGAAGACGAAGCCTCTTCTAGATTCAAAGTGCATCGAAGAGACAAATTTTCATTACAGGATGGACGACGAGCTGTGCATGAACATTGAGGGGGCGAATTAGTTTTCCTACTGGTAGTTTGGTCGATT
Homology
[Close]
BLAST of WMU52788 vs. NCBI nr
Match: gi|659074121|ref|XP_008437433.1| (PREDICTED: BTB/POZ domain-containing protein At3g05675 [Cucumis melo])

HSP 1 Score: 61.6 bits (148), Expect = 3.7e-07
Identity = 26/32 (81.25%), Postives = 29/32 (90.62%), Query Frame = 3 

Query: 3   RKTKPLLDSKCIEETNFHYRMDDELCMNIEGA 62
           RK KPLLDSKCI ET+F Y+MD+ELCMNIEGA
Sbjct: 193 RKMKPLLDSKCIAETDFRYKMDEELCMNIEGA 224

Query: 63   99
           
Sbjct: 253  224

[Close]
BLAST of WMU52788 vs. NCBI nr
Match: gi|778699260|ref|XP_011654681.1| (PREDICTED: BTB/POZ domain-containing protein At3g05675 [Cucumis sativus])

HSP 1 Score: 61.6 bits (148), Expect = 3.7e-07
Identity = 26/32 (81.25%), Postives = 29/32 (90.62%), Query Frame = 3 

Query: 3   RKTKPLLDSKCIEETNFHYRMDDELCMNIEGA 62
           RK KPLLDSKCI ET+F Y+MD+ELCMNIEGA
Sbjct: 193 RKMKPLLDSKCIAETDFRYKMDEELCMNIEGA 224

Query: 63   99
           
Sbjct: 253  224

The following BLAST results are available for this feature:
BLAST of WMU52788 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659074121|ref|XP_008437433.1|3.7e-0781.25PREDICTED: BTB/POZ domain-containing protein At3g05675 [Cucumis melo][more]
gi|778699260|ref|XP_011654681.1|3.7e-0781.25PREDICTED: BTB/POZ domain-containing protein At3g05675 [Cucumis sativus][more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla011342Cla011342gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0075303S1_0075303EST