WMU52105 (transcribed_cluster) Watermelon (97103) v1

NameWMU52105
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr5 : 842216 .. 842672 (+)
Sequence length458
The following sequences are available for this feature:

transcribed_cluster sequence

GCAACGAACGGACTAATCCGATGCTTAGCGGTCGCTGTTATACTTAACAAAGCAATCCCGAAACTCCCGCTTTGTAAGTAATTTCCATTCAATCCTCCATCCACAAATCCCTCTGAGATACTCTGAGCTTTGTGGGCTTTTGGACAACACAACCCCTTTTGATACTTTGCAAAATAGGAACCAAGACCCAGAAGAGATTCGAACGAAAACTGCGATCACCGCCTTCAGATTTCTGGCTTCTAGTAATTGGACGAGTAGAACAAGACAAATTATGAGGAAATCTTCGAAGCTTTTTGGATTGAATAAACCCAAAAGACAAGAAGTTGGTAGAGCAAGGCCTAGTTGGTTGAGGGGAGCCGTTGAAGACGAAGGGACCGGATATAAGTCCTACAGTTACAGTTTCCATAAGGGGTTCTGATTTTCTGAGTTCAACGAGCATTTCAAGTAGAAAAGGACGA
BLAST of WMU52105 vs. NCBI nr
Match: gi|659074969|ref|XP_008437893.1| (PREDICTED: uncharacterized protein LOC103483186 isoform X2 [Cucumis melo])

HSP 1 Score: 156.0 bits (393), Expect = 5.3e-35
Identity = 74/93 (79.57%), Postives = 81/93 (87.10%), Query Frame = -2

Query: 128 METVTVGLISGPFVFNGSPQPTRPCSTNFLSFGFIQSKKLRRFPHNLSCSTRPITRSQKS 187
           METV+VGLIS PF+FNGSPQ TRPCSTNFLSFGF+QSKKLRRFPHN SC  RP TR++K 
Sbjct: 1   METVSVGLISSPFIFNGSPQRTRPCSTNFLSFGFLQSKKLRRFPHNFSCINRPTTRNEKY 60

Query: 188 EGGDRSFRSNLFWVLVPILQSIKRGCVVQKPTK 247
           EGGDRSFRSNLFWVLVPILQSIK G ++ K  K
Sbjct: 61  EGGDRSFRSNLFWVLVPILQSIK-GVILSKTHK 92

Query: 248 307
           
Sbjct: 121 92

Query: 308 367
           
Sbjct: 181 92

Query: 368 407
           
Sbjct: 241 92

BLAST of WMU52105 vs. NCBI nr
Match: gi|659074971|ref|XP_008437894.1| (PREDICTED: uncharacterized protein LOC103483186 isoform X3 [Cucumis melo])

HSP 1 Score: 156.0 bits (393), Expect = 5.3e-35
Identity = 74/93 (79.57%), Postives = 81/93 (87.10%), Query Frame = -2

Query: 128 METVTVGLISGPFVFNGSPQPTRPCSTNFLSFGFIQSKKLRRFPHNLSCSTRPITRSQKS 187
           METV+VGLIS PF+FNGSPQ TRPCSTNFLSFGF+QSKKLRRFPHN SC  RP TR++K 
Sbjct: 1   METVSVGLISSPFIFNGSPQRTRPCSTNFLSFGFLQSKKLRRFPHNFSCINRPTTRNEKY 60

Query: 188 EGGDRSFRSNLFWVLVPILQSIKRGCVVQKPTK 247
           EGGDRSFRSNLFWVLVPILQSIK G ++ K  K
Sbjct: 61  EGGDRSFRSNLFWVLVPILQSIK-GVILSKTHK 92

Query: 248 307
           
Sbjct: 121 92

Query: 308 367
           
Sbjct: 181 92

Query: 368 407
           
Sbjct: 241 92

BLAST of WMU52105 vs. NCBI nr
Match: gi|659074967|ref|XP_008437892.1| (PREDICTED: uncharacterized protein LOC103483186 isoform X1 [Cucumis melo])

HSP 1 Score: 156.0 bits (393), Expect = 5.3e-35
Identity = 74/93 (79.57%), Postives = 81/93 (87.10%), Query Frame = -2

Query: 128 METVTVGLISGPFVFNGSPQPTRPCSTNFLSFGFIQSKKLRRFPHNLSCSTRPITRSQKS 187
           METV+VGLIS PF+FNGSPQ TRPCSTNFLSFGF+QSKKLRRFPHN SC  RP TR++K 
Sbjct: 1   METVSVGLISSPFIFNGSPQRTRPCSTNFLSFGFLQSKKLRRFPHNFSCINRPTTRNEKY 60

Query: 188 EGGDRSFRSNLFWVLVPILQSIKRGCVVQKPTK 247
           EGGDRSFRSNLFWVLVPILQSIK G ++ K  K
Sbjct: 61  EGGDRSFRSNLFWVLVPILQSIK-GVILSKTHK 92

Query: 248 307
           
Sbjct: 121 92

Query: 308 367
           
Sbjct: 181 92

Query: 368 407
           
Sbjct: 241 92

BLAST of WMU52105 vs. NCBI nr
Match: gi|449432050|ref|XP_004133813.1| (PREDICTED: uncharacterized protein LOC101209825 isoform X1 [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 3.8e-33
Identity = 72/93 (77.42%), Postives = 79/93 (84.95%), Query Frame = -2

Query: 128 METVTVGLISGPFVFNGSPQPTRPCSTNFLSFGFIQSKKLRRFPHNLSCSTRPITRSQKS 187
           METV+VGLIS PF+FNGSPQ TRPCSTNFLS GF+QSKKLRRFPHN SC  RP TR+QK 
Sbjct: 1   METVSVGLISIPFIFNGSPQRTRPCSTNFLSSGFLQSKKLRRFPHNFSCINRPTTRNQKY 60

Query: 188 EGGDRSFRSNLFWVLVPILQSIKRGCVVQKPTK 247
           EGGDRSF SNLFWVLVP+LQSIK G ++ K  K
Sbjct: 61  EGGDRSFSSNLFWVLVPVLQSIK-GVILSKTHK 92

Query: 248 307
           
Sbjct: 121 92

Query: 308 367
           
Sbjct: 181 92

Query: 368 407
           
Sbjct: 241 92

BLAST of WMU52105 vs. NCBI nr
Match: gi|778676901|ref|XP_011650686.1| (PREDICTED: uncharacterized protein LOC101209825 isoform X3 [Cucumis sativus])

HSP 1 Score: 149.8 bits (377), Expect = 3.8e-33
Identity = 72/93 (77.42%), Postives = 79/93 (84.95%), Query Frame = -2

Query: 128 METVTVGLISGPFVFNGSPQPTRPCSTNFLSFGFIQSKKLRRFPHNLSCSTRPITRSQKS 187
           METV+VGLIS PF+FNGSPQ TRPCSTNFLS GF+QSKKLRRFPHN SC  RP TR+QK 
Sbjct: 1   METVSVGLISIPFIFNGSPQRTRPCSTNFLSSGFLQSKKLRRFPHNFSCINRPTTRNQKY 60

Query: 188 EGGDRSFRSNLFWVLVPILQSIKRGCVVQKPTK 247
           EGGDRSF SNLFWVLVP+LQSIK G ++ K  K
Sbjct: 61  EGGDRSFSSNLFWVLVPVLQSIK-GVILSKTHK 92

Query: 248 307
           
Sbjct: 121 92

Query: 308 367
           
Sbjct: 181 92

Query: 368 407
           
Sbjct: 241 92

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659074969|ref|XP_008437893.1|5.3e-3579.57PREDICTED: uncharacterized protein LOC103483186 isoform X2 [Cucumis melo][more]
gi|659074971|ref|XP_008437894.1|5.3e-3579.57PREDICTED: uncharacterized protein LOC103483186 isoform X3 [Cucumis melo][more]
gi|659074967|ref|XP_008437892.1|5.3e-3579.57PREDICTED: uncharacterized protein LOC103483186 isoform X1 [Cucumis melo][more]
gi|449432050|ref|XP_004133813.1|3.8e-3377.42PREDICTED: uncharacterized protein LOC101209825 isoform X1 [Cucumis sativus][more]
gi|778676901|ref|XP_011650686.1|3.8e-3377.42PREDICTED: uncharacterized protein LOC101209825 isoform X3 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla021156Cla021156gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0063747S1_0063747EST