WMU51977 (transcribed_cluster) Watermelon (97103) v1

NameWMU51977
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPhytosylfokine-alpha receptor 2
LocationChr5 : 9576679 .. 9576918 (-)
Sequence length241
The following sequences are available for this feature:

transcribed_cluster sequence

CTTGTAAATGCATAGACCAAGATCCAAGGAAGAGACCTTCGATTGAAGAAGTTTCTTCATGGCTAGATGGTGTTACGTTGTAGGTTTTTCTTACACCAAATGCTTGGTTTGCATTTTCATCCCTCATATCAAACTACATTGTGTATAGCAAAACCATTGAAGTCTATGAAGCACAACGCAACCCCATCAAATGATGAAGGTACAAAAGATGGAGGCTGTTCATAACTTAGTGACTTTTTTT
BLAST of WMU51977 vs. NCBI nr
Match: gi|659112006|ref|XP_008456020.1| (PREDICTED: phytosulfokine receptor 2 [Cucumis melo])

HSP 1 Score: 60.1 bits (144), Expect = 2.0e-06
Identity = 25/26 (96.15%), Postives = 26/26 (100.00%), Query Frame = 3

Query: 3    CKCIDQDPRKRPSIEEVSSWLDGVTL 62
            CKCI+QDPRKRPSIEEVSSWLDGVTL
Sbjct: 1033 CKCIEQDPRKRPSIEEVSSWLDGVTL 1058

Query: 63   81
            
Sbjct: 1093 1058

BLAST of WMU51977 vs. NCBI nr
Match: gi|449457017|ref|XP_004146245.1| (PREDICTED: phytosulfokine receptor 2 [Cucumis sativus])

HSP 1 Score: 58.5 bits (140), Expect = 6.0e-06
Identity = 24/25 (96.00%), Postives = 25/25 (100.00%), Query Frame = 3

Query: 3    CKCIDQDPRKRPSIEEVSSWLDGVT 62
            CKCI+QDPRKRPSIEEVSSWLDGVT
Sbjct: 1031 CKCIEQDPRKRPSIEEVSSWLDGVT 1055

Query: 63   78
            
Sbjct: 1091 1055

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659112006|ref|XP_008456020.1|2.0e-0696.15PREDICTED: phytosulfokine receptor 2 [Cucumis melo][more]
gi|449457017|ref|XP_004146245.1|6.0e-0696.00PREDICTED: phytosulfokine receptor 2 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla004292Cla004292gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0061702S1_0061702EST