WMU49943 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU49943
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr5 : 4004397 .. 4004678 (-)
Sequence length335
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

CGCAGAGTGGCTTATTTACGGTCCGGGGTAGAATTGTAAAGTTGAAAGGCGAAGACGGCGGTGAGAATGGGGTCGTGGAACCTTACGCACGACGGACGAGAACGGCGTCATGGAGGCTGCCGTCCGACTCGGGGAGCAGTTGGGGCGAGAAAATTAGGAAACGGTAGAAACCCTACGCGGAAAATTAGGAAAAGTCTTTATCCAGAGATCTCTCGGCTGCTTGGATTGCCGGAAAAGGTCATATCGATTTCCAAGCTATGAGAATTGAGAATTGATCGTTCTTTCAGTTGGTATGGTATGTCAATGTGTGCTAATTTTATGATGCGAATTTTCAA
Homology
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BLAST of WMU49943 vs. NCBI nr
Match: gi|449432586|ref|XP_004134080.1| (PREDICTED: 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial [Cucumis sativus])

HSP 1 Score: 58.5 bits (140), Expect = 8.4e-06
Identity = 38/71 (53.52%), Postives = 43/71 (60.56%), Query Frame = 1 

Query: 46  KAKTAVRMGSWNLTHDGRERRHGGCRPTRGAVGARKLGNGRNPTRKIRKSLYPEISRLLG 105
           K + AV+MG  +  HDG              +G RK  NG  P  +IRKSLYPEISRLLG
Sbjct: 171 KGEAAVKMGIADSAHDGENGVMEAAVRLGEQLGERKW-NGE-PYAEIRKSLYPEISRLLG 230

Query: 106 LPEKVISISKL 165
           LPEK ISISKL
Sbjct: 231 LPEKAISISKL 239

Query: 166  225
           
Sbjct: 291  239

Query: 226  259
           
Sbjct: 351  239

The following BLAST results are available for this feature:
BLAST of WMU49943 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449432586|ref|XP_004134080.1|8.4e-0653.52PREDICTED: 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial [Cucumis... [more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla021543Cla021543gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0028046S1_0028046EST