WMU48949 (transcribed_cluster) Watermelon (97103) v1

NameWMU48949
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionEnvelope glycoprotein
LocationChr10 : 937143 .. 937346 (+)
Sequence length202
The following sequences are available for this feature:

transcribed_cluster sequence

TTTCCATGATGATGAAGTCTCCAAAGTCAGCCACAACTATGATCCAGCATAGACATTTTGGCATTTTAACGCCTGGAGCACCGGGGTCGAAATATGTAAGAGGATGGCATGGTGGAGTCATTAGGGAGGATATAAGGCAATGGATGTTGCAAAATTAGAAACCAAGTCGATTGTTTGTTTGTTTTTTTTCTTTCTCTTCTTT
BLAST of WMU48949 vs. NCBI nr
Match: gi|659095578|ref|XP_008448656.1| (PREDICTED: uncharacterized protein LOC103490759 [Cucumis melo])

HSP 1 Score: 89.7 bits (221), Expect = 2.0e-15
Identity = 40/51 (78.43%), Postives = 44/51 (86.27%), Query Frame = 3

Query: 3   SMMMKSPKSATTMIQHRHFGILTPGAPGSKYVRGWHGGVIREDIRQWMLQN 62
           SMM+KS   A+ MIQHRHFGILTP APG KYVRGW GGVIREDIR+W+LQN
Sbjct: 143 SMMIKSSNPASNMIQHRHFGILTPVAPGPKYVRGWQGGVIREDIRRWLLQN 193

Query: 63  122
           
Sbjct: 203 193

Query: 123 156
           
Sbjct: 263 193

BLAST of WMU48949 vs. NCBI nr
Match: gi|449462045|ref|XP_004148752.1| (PREDICTED: uncharacterized protein LOC101208416 [Cucumis sativus])

HSP 1 Score: 88.6 bits (218), Expect = 4.5e-15
Identity = 40/51 (78.43%), Postives = 43/51 (84.31%), Query Frame = 3

Query: 3   SMMMKSPKSATTMIQHRHFGILTPGAPGSKYVRGWHGGVIREDIRQWMLQN 62
           SMM+KS   A+ MIQHRHFGILTP A G KYVRGW GGVIR+DIRQWMLQN
Sbjct: 143 SMMIKSSNPASNMIQHRHFGILTPAALGPKYVRGWQGGVIRDDIRQWMLQN 193

Query: 63  122
           
Sbjct: 203 193

Query: 123 156
           
Sbjct: 263 193

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659095578|ref|XP_008448656.1|2.0e-1578.43PREDICTED: uncharacterized protein LOC103490759 [Cucumis melo][more]
gi|449462045|ref|XP_004148752.1|4.5e-1578.43PREDICTED: uncharacterized protein LOC101208416 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla008828Cla008828gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0011395S1_0011395EST