WMU45426 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU45426
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown protein
Location	Chr3 : 4343750 .. 4343930 (+)
Sequence length	183

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GCTTGCTAGCTCAGTATACACAAGTCCAATTCCAGGAACACGGACTAGTCCCAGACTGGGACCAAGCCCAAGAACCCATGCCATTGAGACTTTACTGTGCAGCTCGAATTCGTATCGTTTAACAGTACCATAATGCCACACATACATGATGACAAGAAAAGACTCCAGCAATCACAAGGGGAC

Library


Library category	ESTs
watermelon fruit 26d library	2

Homology

[Close]

BLAST of WMU45426 vs. TAIR10
Match: AT1G31120.1 (AT1G31120.1 K+ uptake permease 10)

HSP 1 Score: 114.4 bits (285), Expect = 2.5e-26
Identity = 53/61 (86.89%), Postives = 56/61 (91.80%), Query Frame = -1


Query: 1   VPL*LLESFLVIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA 60
           VPL +  +FLVIMYVWHYGT+KRYEFE+HSKVSMAW+LGLGPSLGLVRVPGIGLVYTELA
Sbjct: 509 VPLVIAAAFLVIMYVWHYGTLKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELA 568

Query: 61  S 120
           S
Sbjct: 569 S 569

Query: 121  180
           
Sbjct: 629  569

Query: 181  184
           
Sbjct: 689  569

[Close]

BLAST of WMU45426 vs. TAIR10
Match: AT2G35060.2 (AT2G35060.2 K+ uptake permease 11)

HSP 1 Score: 107.8 bits (268), Expect = 2.3e-24
Identity = 48/61 (78.69%), Postives = 55/61 (90.16%), Query Frame = -1


Query: 1   VPL*LLESFLVIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA 60
           VPL +  +FL+IM+VWHYGT+KRYEFE+H +VSMAW+LGLGPSLGLVRVPG+GLVYTELA
Sbjct: 511 VPLVIAAAFLLIMWVWHYGTLKRYEFEMHCRVSMAWILGLGPSLGLVRVPGVGLVYTELA 570

Query: 61  S 120
           S
Sbjct: 571 S 571

Query: 121  180
           
Sbjct: 631  571

Query: 181  184
           
Sbjct: 691  571

[Close]

BLAST of WMU45426 vs. TAIR10
Match: AT4G19960.1 (AT4G19960.1 K+ uptake permease 9)

HSP 1 Score: 101.7 bits (252), Expect = 1.7e-22
Identity = 47/61 (77.05%), Postives = 52/61 (85.25%), Query Frame = -1


Query: 1   VPL*LLESFLVIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA 60
           VPL +    L++M VWHY TVK+YEFE+HSKVSM+W+LGLGPSLGLVRVPGIGLVYTELA
Sbjct: 526 VPLIIAAISLLVMSVWHYATVKKYEFEMHSKVSMSWILGLGPSLGLVRVPGIGLVYTELA 585

Query: 61  S 120
           S
Sbjct: 586 S 586

Query: 121  180
           
Sbjct: 646  586

Query: 181  184
           
Sbjct: 706  586

[Close]

BLAST of WMU45426 vs. TAIR10
Match: AT3G02050.1 (AT3G02050.1 K+ uptake transporter 3)

HSP 1 Score: 94.0 bits (232), Expect = 3.5e-20
Identity = 41/61 (67.21%), Postives = 50/61 (81.97%), Query Frame = -1


Query: 1   VPL*LLESFLVIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA 60
           VP  L   F++ MYVWHYGT ++Y F+LH+KVS+ W+LGLGPSLG+VRVPGIGLVY+ELA
Sbjct: 481 VPFVLTFIFMIAMYVWHYGTRRKYSFDLHNKVSLKWLLGLGPSLGIVRVPGIGLVYSELA 540

Query: 61  S 120
           +
Sbjct: 541 T 541

Query: 121  180
           
Sbjct: 601  541

Query: 181  184
           
Sbjct: 661  541

[Close]

BLAST of WMU45426 vs. TAIR10
Match: AT2G40540.1 (AT2G40540.1 potassium transporter 2)

HSP 1 Score: 86.7 bits (213), Expect = 5.6e-18
Identity = 37/61 (60.66%), Postives = 49/61 (80.33%), Query Frame = -1


Query: 1   VPL*LLESFLVIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA 60
           +P+ L   F++IM+VWHY T+K+YEF+L +KVS+ W+L LGPSLG+ RVPGIGLV+T+L 
Sbjct: 480 LPILLSLIFMIIMFVWHYTTIKKYEFDLQNKVSLEWLLALGPSLGISRVPGIGLVFTDLT 539

Query: 61  S 120
           S
Sbjct: 540 S 540

Query: 121  180
           
Sbjct: 600  540

Query: 181  184
           
Sbjct: 660  540

[Close]

BLAST of WMU45426 vs. Swiss-Prot
Match: POT10_ARATH (Potassium transporter 10 OS=Arabidopsis thaliana GN=POT10 PE=2 SV=2)

HSP 1 Score: 114.4 bits (285), Expect = 4.4e-25
Identity = 53/61 (86.89%), Postives = 56/61 (91.80%), Query Frame = -1


Query: 1   VPL*LLESFLVIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA 60
           VPL +  +FLVIMYVWHYGT+KRYEFE+HSKVSMAW+LGLGPSLGLVRVPGIGLVYTELA
Sbjct: 509 VPLVIAAAFLVIMYVWHYGTLKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELA 568

Query: 61  S 120
           S
Sbjct: 569 S 569

Query: 121  180
           
Sbjct: 629  569

Query: 181  184
           
Sbjct: 689  569

[Close]

BLAST of WMU45426 vs. Swiss-Prot
Match: HAK18_ORYSJ (Potassium transporter 18 OS=Oryza sativa subsp. japonica GN=HAK18 PE=2 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 2.2e-24
Identity = 51/61 (83.61%), Postives = 54/61 (88.52%), Query Frame = -1


Query: 1   VPL*LLESFLVIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA 60
           VPL     F++IMYVWHYGT+KRYEFE+HSKVSMAW+LGLGPSLGLVRVPGIGLVYTELA
Sbjct: 498 VPLVFAAGFMIIMYVWHYGTLKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELA 557

Query: 61  S 120
           S
Sbjct: 558 S 558

Query: 121  180
           
Sbjct: 618  558

Query: 181  184
           
Sbjct: 678  558

[Close]

BLAST of WMU45426 vs. Swiss-Prot
Match: POT11_ARATH (Potassium transporter 11 OS=Arabidopsis thaliana GN=POT11 PE=2 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 4.1e-23
Identity = 48/61 (78.69%), Postives = 55/61 (90.16%), Query Frame = -1


Query: 1   VPL*LLESFLVIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA 60
           VPL +  +FL+IM+VWHYGT+KRYEFE+H +VSMAW+LGLGPSLGLVRVPG+GLVYTELA
Sbjct: 510 VPLVIAAAFLLIMWVWHYGTLKRYEFEMHCRVSMAWILGLGPSLGLVRVPGVGLVYTELA 569

Query: 61  S 120
           S
Sbjct: 570 S 570

Query: 121  180
           
Sbjct: 630  570

Query: 181  184
           
Sbjct: 690  570

[Close]

BLAST of WMU45426 vs. Swiss-Prot
Match: HAK11_ORYSJ (Probable potassium transporter 11 OS=Oryza sativa subsp. japonica GN=HAK11 PE=2 SV=4)

HSP 1 Score: 107.1 bits (266), Expect = 7.1e-23
Identity = 49/61 (80.33%), Postives = 53/61 (86.89%), Query Frame = -1


Query: 1   VPL*LLESFLVIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA 60
           VPL +  +F +IMYVWH+ TVKRYEFE+HSKVSMAW+LGLGPSLGLVRVPGIG VYTELA
Sbjct: 500 VPLVIATAFFIIMYVWHFCTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGFVYTELA 559

Query: 61  S 120
           S
Sbjct: 560 S 560

Query: 121  180
           
Sbjct: 620  560

Query: 181  184
           
Sbjct: 680  560

[Close]

BLAST of WMU45426 vs. Swiss-Prot
Match: HAK12_ORYSJ (Putative potassium transporter 12 OS=Oryza sativa subsp. japonica GN=HAK12 PE=2 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 7.8e-22
Identity = 48/61 (78.69%), Postives = 52/61 (85.25%), Query Frame = -1


Query: 1   VPL*LLESFLVIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA 60
           VPL +  +  +IMYVWH+ TVKRYEFE+HSKVSMAW+LGLGPSLGLVRVPGIG VYTELA
Sbjct: 500 VPLVVATTCFIIMYVWHFCTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGFVYTELA 559

Query: 61  S 120
           S
Sbjct: 560 S 560

Query: 121  180
           
Sbjct: 620  560

Query: 181  184
           
Sbjct: 680  560

[Close]

BLAST of WMU45426 vs. NCBI nr
Match: gi|778658295|ref|XP_011652452.1| (PREDICTED: potassium transporter 10-like [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 3.2e-23
Identity = 55/61 (90.16%), Postives = 58/61 (95.08%), Query Frame = -1


Query: 1   VPL*LLESFLVIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA 60
           VPL +  +FL+IMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA
Sbjct: 502 VPLVIAGAFLIIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA 561

Query: 61  S 120
           S
Sbjct: 562 S 562

Query: 121  180
           
Sbjct: 622  562

Query: 181  184
           
Sbjct: 682  562

[Close]

BLAST of WMU45426 vs. NCBI nr
Match: gi|700209374|gb|KGN64470.1| (hypothetical protein Csa_1G057060 [Cucumis sativus])

HSP 1 Score: 115.5 bits (288), Expect = 3.2e-23
Identity = 55/61 (90.16%), Postives = 58/61 (95.08%), Query Frame = -1


Query: 1   VPL*LLESFLVIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA 60
           VPL +  +FL+IMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA
Sbjct: 417 VPLVIAGAFLIIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA 476

Query: 61  S 120
           S
Sbjct: 477 S 477

Query: 121  180
           
Sbjct: 537  477

Query: 181  184
           
Sbjct: 597  477

[Close]

BLAST of WMU45426 vs. NCBI nr
Match: gi|659067648|ref|XP_008440560.1| (PREDICTED: potassium transporter 11-like [Cucumis melo])

HSP 1 Score: 115.5 bits (288), Expect = 3.2e-23
Identity = 55/61 (90.16%), Postives = 58/61 (95.08%), Query Frame = -1


Query: 1   VPL*LLESFLVIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA 60
           VPL +  +FL+IMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA
Sbjct: 502 VPLVIAGAFLIIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA 561

Query: 61  S 120
           S
Sbjct: 562 S 562

Query: 121  180
           
Sbjct: 622  562

Query: 181  184
           
Sbjct: 682  562

[Close]

BLAST of WMU45426 vs. NCBI nr
Match: gi|970010006|ref|XP_015065902.1| (PREDICTED: potassium transporter 11 [Solanum pennellii])

HSP 1 Score: 115.2 bits (287), Expect = 4.1e-23
Identity = 54/61 (88.52%), Postives = 58/61 (95.08%), Query Frame = -1


Query: 1   VPL*LLESFLVIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA 60
           VPL +  +FLVIMYVWHYGTVKRYEFE+HSKVSMAW+LGLGPSLGLVRVPGIGLVYTELA
Sbjct: 499 VPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELA 558

Query: 61  S 120
           S
Sbjct: 559 S 559

Query: 121  180
           
Sbjct: 619  559

Query: 181  184
           
Sbjct: 679  559

[Close]

BLAST of WMU45426 vs. NCBI nr
Match: gi|641858605|gb|KDO77327.1| (hypothetical protein CISIN_1g003514mg [Citrus sinensis])

HSP 1 Score: 115.2 bits (287), Expect = 4.1e-23
Identity = 54/61 (88.52%), Postives = 58/61 (95.08%), Query Frame = -1


Query: 1   VPL*LLESFLVIMYVWHYGTVKRYEFELHSKVSMAWVLGLGPSLGLVRVPGIGLVYTELA 60
           VPL +  +FLVIMYVWHYGTVKRYEFE+HSKVSMAW+LGLGPSLGLVRVPGIGLVYTELA
Sbjct: 395 VPLVIAAAFLVIMYVWHYGTVKRYEFEMHSKVSMAWILGLGPSLGLVRVPGIGLVYTELA 454

Query: 61  S 120
           S
Sbjct: 455 S 455

Query: 121  180
           
Sbjct: 515  455

Query: 181  184
           
Sbjct: 575  455

The following BLAST results are available for this feature:

BLAST of WMU45426 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G31120.1	2.5e-26	86.89	K+ uptake permease 10	[more]
AT2G35060.2	2.3e-24	78.69	K+ uptake permease 11	[more]
AT4G19960.1	1.7e-22	77.05	K+ uptake permease 9	[more]
AT3G02050.1	3.5e-20	67.21	K+ uptake transporter 3	[more]
AT2G40540.1	5.6e-18	60.66	potassium transporter 2	[more]

BLAST of WMU45426 vs. Swiss-Prot


Match Name	E-value	Identity	Description
POT10_ARATH	4.4e-25	86.89	Potassium transporter 10 OS=Arabidopsis thaliana GN=POT10 PE=2 SV=2	[more]
HAK18_ORYSJ	2.2e-24	83.61	Potassium transporter 18 OS=Oryza sativa subsp. japonica GN=HAK18 PE=2 SV=1	[more]
POT11_ARATH	4.1e-23	78.69	Potassium transporter 11 OS=Arabidopsis thaliana GN=POT11 PE=2 SV=1	[more]
HAK11_ORYSJ	7.1e-23	80.33	Probable potassium transporter 11 OS=Oryza sativa subsp. japonica GN=HAK11 PE=2 ...	[more]
HAK12_ORYSJ	7.8e-22	78.69	Putative potassium transporter 12 OS=Oryza sativa subsp. japonica GN=HAK12 PE=2 ...	[more]

BLAST of WMU45426 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778658295\|ref\|XP_011652452.1\|	3.2e-23	90.16	PREDICTED: potassium transporter 10-like [Cucumis sativus]	[more]
gi\|700209374\|gb\|KGN64470.1\|	3.2e-23	90.16	hypothetical protein Csa_1G057060 [Cucumis sativus]	[more]
gi\|659067648\|ref\|XP_008440560.1\|	3.2e-23	90.16	PREDICTED: potassium transporter 11-like [Cucumis melo]	[more]
gi\|970010006\|ref\|XP_015065902.1\|	4.1e-23	88.52	PREDICTED: potassium transporter 11 [Solanum pennellii]	[more]
gi\|641858605\|gb\|KDO77327.1\|	4.1e-23	88.52	hypothetical protein CISIN_1g003514mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla019340	Cla019340	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S3_0052385	S3_0052385	EST
S3_0077159	S3_0077159	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR30540	OSMOTIC STRESS POTASSIUM TRANSPORTER	coord: 1..28 score: 3.4
None	No IPR available	PANTHER	PTHR30540:SF31	SUBFAMILY NOT NAMED	coord: 1..28 score: 3.4