WMU44000 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU44000
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr5 : 12878527 .. 12878937 (-)
Sequence length410
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

ATAATAAGCTCTAAGAGGAACTAAATTTTCATGCTTCATCCTCCCCACCTCCTCCATTTTCTCCCTGAACTCCTTCTCCGCCGCAGTCATCTCCTTCAACCGCTTCACAGCCACCACCATCCCTGTCTCCAGTGTCGCCTTATACGCTGTCCCGAACGCCCCCTTCCCGAGGACCTCAGCCGACGCCCTCAACAAGTCCTCCAAATCAAACACATTTCCCACATTACCAAAGAACACCAATTTCTTATCCTTTTCCCCGCCCTTCCCTGATGATTTCGCTATAGTCAAATGATCTATGCTTACCCTTTCGCTACTTCCTTCCACTGTCGTCATCTTCTCTCTCGGCACCCCAACCTCACCAGCCGACCGAACCCCCTCTTTCGACTCCGATTTCCCTTTACTCTTTCTTT
Homology
[Close]
BLAST of WMU44000 vs. TAIR10
Match: AT3G17840.1 (AT3G17840.1 receptor-like kinase 902)

HSP 1 Score: 121.3 bits (303), Expect = 4.5e-28
Identity = 60/80 (75.00%), Postives = 67/80 (83.75%), Query Frame = -3 

Query: 1   LVFFGNVGNVFDLEDLLRASAEVLGKGAFGTAYKATLETGMVVAVKRLKEMTAAEKEFRE 60
           LVFFGN   VFDLEDLLRASAEVLGKG FGTAYKA L+   +VAVKRLK++T A++EF+E
Sbjct: 348 LVFFGNATKVFDLEDLLRASAEVLGKGTFGTAYKAVLDAVTLVAVKRLKDVTMADREFKE 407

Query: 61  KMEEVGRMKHENLVPLRAYY 120
           K+E VG M HENLVPLRAYY
Sbjct: 408 KIEVVGAMDHENLVPLRAYY 427

Query: 121  180
           
Sbjct: 468  427

Query: 181  240
           
Sbjct: 528  427

[Close]
BLAST of WMU44000 vs. TAIR10
Match: AT1G48480.1 (AT1G48480.1 receptor-like kinase 1)

HSP 1 Score: 120.9 bits (302), Expect = 5.9e-28
Identity = 61/80 (76.25%), Postives = 66/80 (82.50%), Query Frame = -3 

Query: 1   LVFFGNVGNVFDLEDLLRASAEVLGKGAFGTAYKATLETGMVVAVKRLKEMTAAEKEFRE 60
           LVFFGN   VFDLEDLLRASAEVLGKG FGTAYKA L+   VVAVKRLK++  A+KEF+E
Sbjct: 354 LVFFGNATKVFDLEDLLRASAEVLGKGTFGTAYKAVLDAVTVVAVKRLKDVMMADKEFKE 413

Query: 61  KMEEVGRMKHENLVPLRAYY 120
           K+E VG M HENLVPLRAYY
Sbjct: 414 KIELVGAMDHENLVPLRAYY 433

Query: 121  180
           
Sbjct: 474  433

Query: 181  240
           
Sbjct: 534  433

[Close]
BLAST of WMU44000 vs. TAIR10
Match: AT2G26730.1 (AT2G26730.1 Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 101.3 bits (251), Expect = 4.9e-22
Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = -3 

Query: 1   FDLEDLLRASAEVLGKGAFGTAYKATLETGMVVAVKRLKEMTAAEKEFREKMEEVGRMKH 60
           FDLEDLLRASAEVLGKG+ GT+YKA LE G  V VKRLK++ A++KEF  +ME VG++KH
Sbjct: 344 FDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVMASKKEFETQMEVVGKIKH 403

Query: 61  ENLVPLRAYY 120
            N++PLRAYY
Sbjct: 404 PNVIPLRAYY 413

Query: 121  180
           
Sbjct: 464  413

Query: 181  211
           
Sbjct: 524  413

[Close]
BLAST of WMU44000 vs. TAIR10
Match: AT3G08680.1 (AT3G08680.1 Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 100.9 bits (250), Expect = 6.3e-22
Identity = 52/81 (64.20%), Postives = 59/81 (72.84%), Query Frame = -3 

Query: 1   LVFFGNVGNVFDLEDLLRASAEVLGKGAFGTAYKATLETGMVVAVKRLKEMTAAEKEFRE 60
           LVFF      FDLEDLLRASAEVLGKG++GT YKA LE G  V VKRLKE+ A ++EF +
Sbjct: 324 LVFFEGSSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVAAGKREFEQ 383

Query: 61  KMEEVGRMK-HENLVPLRAYY 120
           +ME VGR+  H N+ PLRAYY
Sbjct: 384 QMEAVGRISPHVNVAPLRAYY 404

Query: 121  180
           
Sbjct: 444  404

Query: 181  240
           
Sbjct: 504  404

[Close]
BLAST of WMU44000 vs. TAIR10
Match: AT4G23740.1 (AT4G23740.1 Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 99.4 bits (246), Expect = 1.8e-21
Identity = 49/80 (61.25%), Postives = 58/80 (72.50%), Query Frame = -3 

Query: 1   LVFFGNVGNVFDLEDLLRASAEVLGKGAFGTAYKATLETGMVVAVKRLKEMTAAEKEFRE 60
           L FF      FDLEDLLRASAEVLGKG FGT YKA LE    VAVKRLK++ A +++F +
Sbjct: 320 LSFFEGCNYSFDLEDLLRASAEVLGKGTFGTTYKAVLEDATSVAVKRLKDVAAGKRDFEQ 379

Query: 61  KMEEVGRMKHENLVPLRAYY 120
           +ME +G +KHEN+V L+AYY
Sbjct: 380 QMEIIGGIKHENVVELKAYY 399

Query: 121  180
           
Sbjct: 440  399

Query: 181  240
           
Sbjct: 500  399

[Close]
BLAST of WMU44000 vs. Swiss-Prot
Match: RLK90_ARATH (Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 8.1e-27
Identity = 60/80 (75.00%), Postives = 67/80 (83.75%), Query Frame = -3 

Query: 1   LVFFGNVGNVFDLEDLLRASAEVLGKGAFGTAYKATLETGMVVAVKRLKEMTAAEKEFRE 60
           LVFFGN   VFDLEDLLRASAEVLGKG FGTAYKA L+   +VAVKRLK++T A++EF+E
Sbjct: 348 LVFFGNATKVFDLEDLLRASAEVLGKGTFGTAYKAVLDAVTLVAVKRLKDVTMADREFKE 407

Query: 61  KMEEVGRMKHENLVPLRAYY 120
           K+E VG M HENLVPLRAYY
Sbjct: 408 KIEVVGAMDHENLVPLRAYY 427

Query: 121  180
           
Sbjct: 468  427

Query: 181  240
           
Sbjct: 528  427

[Close]
BLAST of WMU44000 vs. Swiss-Prot
Match: Y1848_ARATH (Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=2 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-26
Identity = 61/80 (76.25%), Postives = 66/80 (82.50%), Query Frame = -3 

Query: 1   LVFFGNVGNVFDLEDLLRASAEVLGKGAFGTAYKATLETGMVVAVKRLKEMTAAEKEFRE 60
           LVFFGN   VFDLEDLLRASAEVLGKG FGTAYKA L+   VVAVKRLK++  A+KEF+E
Sbjct: 354 LVFFGNATKVFDLEDLLRASAEVLGKGTFGTAYKAVLDAVTVVAVKRLKDVMMADKEFKE 413

Query: 61  KMEEVGRMKHENLVPLRAYY 120
           K+E VG M HENLVPLRAYY
Sbjct: 414 KIELVGAMDHENLVPLRAYY 433

Query: 121  180
           
Sbjct: 474  433

Query: 181  240
           
Sbjct: 534  433

[Close]
BLAST of WMU44000 vs. Swiss-Prot
Match: Y2267_ARATH (Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 8.6e-21
Identity = 48/70 (68.57%), Postives = 57/70 (81.43%), Query Frame = -3 

Query: 1   FDLEDLLRASAEVLGKGAFGTAYKATLETGMVVAVKRLKEMTAAEKEFREKMEEVGRMKH 60
           FDLEDLLRASAEVLGKG+ GT+YKA LE G  V VKRLK++ A++KEF  +ME VG++KH
Sbjct: 344 FDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVMASKKEFETQMEVVGKIKH 403

Query: 61  ENLVPLRAYY 120
            N++PLRAYY
Sbjct: 404 PNVIPLRAYY 413

Query: 121  180
           
Sbjct: 464  413

Query: 181  211
           
Sbjct: 524  413

[Close]
BLAST of WMU44000 vs. Swiss-Prot
Match: Y3868_ARATH (Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680 PE=1 SV=1)

HSP 1 Score: 100.9 bits (250), Expect = 1.1e-20
Identity = 52/81 (64.20%), Postives = 59/81 (72.84%), Query Frame = -3 

Query: 1   LVFFGNVGNVFDLEDLLRASAEVLGKGAFGTAYKATLETGMVVAVKRLKEMTAAEKEFRE 60
           LVFF      FDLEDLLRASAEVLGKG++GT YKA LE G  V VKRLKE+ A ++EF +
Sbjct: 324 LVFFEGSSYNFDLEDLLRASAEVLGKGSYGTTYKAILEEGTTVVVKRLKEVAAGKREFEQ 383

Query: 61  KMEEVGRMK-HENLVPLRAYY 120
           +ME VGR+  H N+ PLRAYY
Sbjct: 384 QMEAVGRISPHVNVAPLRAYY 404

Query: 121  180
           
Sbjct: 444  404

Query: 181  240
           
Sbjct: 504  404

[Close]
BLAST of WMU44000 vs. Swiss-Prot
Match: Y4374_ARATH (Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 3.3e-20
Identity = 49/80 (61.25%), Postives = 58/80 (72.50%), Query Frame = -3 

Query: 1   LVFFGNVGNVFDLEDLLRASAEVLGKGAFGTAYKATLETGMVVAVKRLKEMTAAEKEFRE 60
           L FF      FDLEDLLRASAEVLGKG FGT YKA LE    VAVKRLK++ A +++F +
Sbjct: 320 LSFFEGCNYSFDLEDLLRASAEVLGKGTFGTTYKAVLEDATSVAVKRLKDVAAGKRDFEQ 379

Query: 61  KMEEVGRMKHENLVPLRAYY 120
           +ME +G +KHEN+V L+AYY
Sbjct: 380 QMEIIGGIKHENVVELKAYY 399

Query: 121  180
           
Sbjct: 440  399

Query: 181  240
           
Sbjct: 500  399

[Close]
BLAST of WMU44000 vs. NCBI nr
Match: gi|449456219|ref|XP_004145847.1| (PREDICTED: probable inactive receptor kinase RLK902 [Cucumis sativus])

HSP 1 Score: 187.6 bits (475), Expect = 1.5e-44
Identity = 99/124 (79.84%), Postives = 102/124 (82.26%), Query Frame = -3 

Query: 1   VRSAGEVGVPREKMTTVEGSSERVSIDHLTIAXXXXXXXXXXXXLVFFGNVGNVFDLEDL 60
           VR+ GEV VP EK TTVEGSSER++IDHL               LVFFGNVGNVFDLEDL
Sbjct: 277 VRTGGEVEVPGEKTTTVEGSSERINIDHLIAPKSSTKGGERDKKLVFFGNVGNVFDLEDL 336

Query: 61  LRASAEVLGKGAFGTAYKATLETGMVVAVKRLKEMTAAEKEFREKMEEVGRMKHENLVPL 120
           LRASAEVLGKG FGTAYKATLETGMVVAVKRLKEMTAAEKEFREKMEE GRMKHENLVP 
Sbjct: 337 LRASAEVLGKGTFGTAYKATLETGMVVAVKRLKEMTAAEKEFREKMEEAGRMKHENLVPF 396

Query: 121 RAYY 180
           RAYY
Sbjct: 397 RAYY 400

Query: 181  240
           
Sbjct: 457  400

Query: 241  300
           
Sbjct: 517  400

Query: 301  360
           
Sbjct: 577  400

Query: 361  373
           
Sbjct: 637  400

[Close]
BLAST of WMU44000 vs. NCBI nr
Match: gi|659114351|ref|XP_008457025.1| (PREDICTED: probable inactive receptor kinase RLK902 [Cucumis melo])

HSP 1 Score: 185.7 bits (470), Expect = 5.6e-44
Identity = 99/124 (79.84%), Postives = 102/124 (82.26%), Query Frame = -3 

Query: 1   VRSAGEVGVPREKMTTVEGSSERVSIDHLTIAXXXXXXXXXXXXLVFFGNVGNVFDLEDL 60
           VRS GEV VP EK TTVEGSSER++IDHL               LVFFGNVGNVFDLEDL
Sbjct: 277 VRSRGEVEVPGEKTTTVEGSSERINIDHLIAPKSSTKGSERDKKLVFFGNVGNVFDLEDL 336

Query: 61  LRASAEVLGKGAFGTAYKATLETGMVVAVKRLKEMTAAEKEFREKMEEVGRMKHENLVPL 120
           LRASAEVLGKG FGTAYKATLETGMVVAVKRLKEMTAAEKEFREKMEE GRMK+ENLVP 
Sbjct: 337 LRASAEVLGKGTFGTAYKATLETGMVVAVKRLKEMTAAEKEFREKMEEAGRMKNENLVPF 396

Query: 121 RAYY 180
           RAYY
Sbjct: 397 RAYY 400

Query: 181  240
           
Sbjct: 457  400

Query: 241  300
           
Sbjct: 517  400

Query: 301  360
           
Sbjct: 577  400

Query: 361  373
           
Sbjct: 637  400

[Close]
BLAST of WMU44000 vs. NCBI nr
Match: gi|1009128716|ref|XP_015881385.1| (PREDICTED: probable inactive receptor kinase RLK902 isoform X2 [Ziziphus jujuba])

HSP 1 Score: 135.2 bits (339), Expect = 8.6e-29
Identity = 76/119 (63.87%), Postives = 82/119 (68.91%), Query Frame = -3 

Query: 1   EVGVPREKMTTVEGSSERVSIDHLTIAXXXXXXXXXXXXLVFFGNVGNVFDLEDLLRASA 60
           EV +P  K T V+G S         +A            LVFFGN   VFDLEDLLRASA
Sbjct: 288 EVEIPSGK-TMVQGESLSSDFSSSALAAKANARGGGNKNLVFFGNAVRVFDLEDLLRASA 347

Query: 61  EVLGKGAFGTAYKATLETGMVVAVKRLKEMTAAEKEFREKMEEVGRMKHENLVPLRAYY 120
           EVLGKG FGTAYKATLE G+ VAVKRLKE+   EKEFREKMEEVGR+ HENLVPLRAYY
Sbjct: 348 EVLGKGTFGTAYKATLEMGIAVAVKRLKEVAVPEKEFREKMEEVGRVDHENLVPLRAYY 405

Query: 121  180
           
Sbjct: 408  405

Query: 181  240
           
Sbjct: 468  405

Query: 241  300
           
Sbjct: 528  405

Query: 301  358
           
Sbjct: 588  405

[Close]
BLAST of WMU44000 vs. NCBI nr
Match: gi|1009128714|ref|XP_015881384.1| (PREDICTED: probable inactive receptor kinase RLK902 isoform X1 [Ziziphus jujuba])

HSP 1 Score: 135.2 bits (339), Expect = 8.6e-29
Identity = 76/119 (63.87%), Postives = 82/119 (68.91%), Query Frame = -3 

Query: 1   EVGVPREKMTTVEGSSERVSIDHLTIAXXXXXXXXXXXXLVFFGNVGNVFDLEDLLRASA 60
           EV +P  K T V+G S         +A            LVFFGN   VFDLEDLLRASA
Sbjct: 288 EVEIPSGK-TMVQGESLSSDFSSSALAAKANARGGGNKNLVFFGNAVRVFDLEDLLRASA 347

Query: 61  EVLGKGAFGTAYKATLETGMVVAVKRLKEMTAAEKEFREKMEEVGRMKHENLVPLRAYY 120
           EVLGKG FGTAYKATLE G+ VAVKRLKE+   EKEFREKMEEVGR+ HENLVPLRAYY
Sbjct: 348 EVLGKGTFGTAYKATLEMGIAVAVKRLKEVAVPEKEFREKMEEVGRVDHENLVPLRAYY 405

Query: 121  180
           
Sbjct: 408  405

Query: 181  240
           
Sbjct: 468  405

Query: 241  300
           
Sbjct: 528  405

Query: 301  358
           
Sbjct: 588  405

[Close]
BLAST of WMU44000 vs. NCBI nr
Match: gi|1021040687|gb|KZM98468.1| (hypothetical protein DCAR_014170 [Daucus carota subsp. sativus])

HSP 1 Score: 131.7 bits (330), Expect = 9.5e-28
Identity = 73/123 (59.35%), Postives = 88/123 (71.54%), Query Frame = -3 

Query: 1   RSAGEVGVPREKMTTVEGSSERVSIDHLTIAXXXXXXXXXXXXLVFFGNVGNVFDLEDLL 60
           + AG V +PRE +  VE  S+ +S  ++++             LVFFG V   FDLEDLL
Sbjct: 274 KEAGVVDIPRESV--VENGSD-LSSGYMSVKEKGIVKFDGGKRLVFFGKVEKSFDLEDLL 333

Query: 61  RASAEVLGKGAFGTAYKATLETGMVVAVKRLKEMTAAEKEFREKMEEVGRMKHENLVPLR 120
           RASAEVLGKG FGTAYKA LE GMVVAVKRLKE+  +EKE++EK+E VG+M HENLVPLR
Sbjct: 334 RASAEVLGKGTFGTAYKAVLERGMVVAVKRLKEVAVSEKEYKEKIEGVGKMHHENLVPLR 393

Query: 121 AYY 180
           AYY
Sbjct: 394 AYY 393

Query: 181  240
           
Sbjct: 454  393

Query: 241  300
           
Sbjct: 514  393

Query: 301  360
           
Sbjct: 574  393

Query: 361  370
           
Sbjct: 634  393

The following BLAST results are available for this feature:
BLAST of WMU44000 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G17840.14.5e-2875.00 receptor-like kinase 902[more]
AT1G48480.15.9e-2876.25 receptor-like kinase 1[more]
AT2G26730.14.9e-2268.57 Leucine-rich repeat protein kinase family protein[more]
AT3G08680.16.3e-2264.20 Leucine-rich repeat protein kinase family protein[more]
AT4G23740.11.8e-2161.25 Leucine-rich repeat protein kinase family protein[more]
BLAST of WMU44000 vs. Swiss-Prot
Match NameE-valueIdentityDescription
RLK90_ARATH8.1e-2775.00Probable inactive receptor kinase RLK902 OS=Arabidopsis thaliana GN=RLK902 PE=1 ... [more]
Y1848_ARATH1.1e-2676.25Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana GN=RKL1 PE=2... [more]
Y2267_ARATH8.6e-2168.57Probable inactive receptor kinase At2g26730 OS=Arabidopsis thaliana GN=At2g26730... [more]
Y3868_ARATH1.1e-2064.20Probable inactive receptor kinase At3g08680 OS=Arabidopsis thaliana GN=At3g08680... [more]
Y4374_ARATH3.3e-2061.25Probable inactive receptor kinase At4g23740 OS=Arabidopsis thaliana GN=At4g23740... [more]
BLAST of WMU44000 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|449456219|ref|XP_004145847.1|1.5e-4479.84PREDICTED: probable inactive receptor kinase RLK902 [Cucumis sativus][more]
gi|659114351|ref|XP_008457025.1|5.6e-4479.84PREDICTED: probable inactive receptor kinase RLK902 [Cucumis melo][more]
gi|1009128716|ref|XP_015881385.1|8.6e-2963.87PREDICTED: probable inactive receptor kinase RLK902 isoform X2 [Ziziphus jujuba][more]
gi|1009128714|ref|XP_015881384.1|8.6e-2963.87PREDICTED: probable inactive receptor kinase RLK902 isoform X1 [Ziziphus jujuba][more]
gi|1021040687|gb|KZM98468.1|9.5e-2859.35hypothetical protein DCAR_014170 [Daucus carota subsp. sativus][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR000719Prot_kinase_dom
IPR001245Ser-Thr/Tyr_kinase_cat_dom
IPR011009Kinase-like_dom_sf
IPR017441Protein_kinase_ATP_BS
Vocabulary: Molecular Function
TermDefinition
GO:0004672protein kinase activity
GO:0005524ATP binding
Vocabulary: Biological Process
TermDefinition
GO:0006468protein phosphorylation
GO Annotation
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
molecular_function GO:0005524 ATP binding
molecular_function GO:0004672 protein kinase activity
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla013213Cla013213gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S3_0110086S3_0110086EST
S3_0136944S3_0136944EST


InterPro
Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000719Protein kinase domainPROFILEPS50011PROTEIN_KINASE_DOMcoord: 49..111
score: 10
IPR001245Serine-threonine/tyrosine-protein kinase catalytic domainPFAMPF07714Pkinase_Tyrcoord: 53..108
score: 1.
IPR011009Protein kinase-like domainunknownSSF56112Protein kinase-like (PK-like)coord: 53..110
score: 5.84
IPR017441Protein kinase, ATP binding sitePROSITEPS00107PROTEIN_KINASE_ATPcoord: 55..77
scor
NoneNo IPR availableunknownCoilCoilcoord: 82..102
scor
NoneNo IPR availableGENE3DG3DSA:3.30.200.20coord: 52..110
score: 8.1
NoneNo IPR availablePANTHERPTHR27008FAMILY NOT NAMEDcoord: 5..111
score: 1.8
NoneNo IPR availablePANTHERPTHR27008:SF17SUBFAMILY NOT NAMEDcoord: 5..111
score: 1.8