WMU43809 (transcribed_cluster) Watermelon (97103) v1

NameWMU43809
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPolyketide cyclase/dehydrase and lipid transport superfamily protein
LocationChr5 : 12191401 .. 12192647 (+)
Sequence length216
The following sequences are available for this feature:

transcribed_cluster sequence

CAAAGGTTCAGCTAAAATCTCCACCTGAGAAGTTCTATGGCTTCTTCAGGAACCATATGGGAGATTTGGTCAATATGTATCCTGAGCACTTCCAAAGCTTCCAGTTTCTTGAAGGAGATAGCTTCTCTACTGGCAGTGTTATGCATTGGCAATACCACCTTGGGAGTCCAGCAGCAGCAAAGATAAAGATGAGACTTGTGGATGATGTGAAGAGGT
BLAST of WMU43809 vs. NCBI nr
Match: gi|659114461|ref|XP_008457062.1| (PREDICTED: MLP-like protein 423 [Cucumis melo])

HSP 1 Score: 142.1 bits (357), Expect = 3.7e-31
Identity = 64/71 (90.14%), Postives = 71/71 (100.00%), Query Frame = 3

Query: 3   KVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFQFLEGDSFSTGSVMHWQYHLGSPAAAK 62
           KVQLKSPPEKFYGFFRNHMGDLV+M+P++FQSFQFLEG+SF+TGSVMHWQYHLGSPAAAK
Sbjct: 10  KVQLKSPPEKFYGFFRNHMGDLVHMFPDNFQSFQFLEGESFTTGSVMHWQYHLGSPAAAK 69

Query: 63  IKMRLVDDVKR 122
           IKMRLVDDVK+
Sbjct: 70  IKMRLVDDVKK 80

Query: 123 182
           
Sbjct: 130 80

Query: 183 216
           
Sbjct: 190 80

BLAST of WMU43809 vs. NCBI nr
Match: gi|449464144|ref|XP_004149789.1| (PREDICTED: MLP-like protein 34 [Cucumis sativus])

HSP 1 Score: 138.7 bits (348), Expect = 4.1e-30
Identity = 62/71 (87.32%), Postives = 70/71 (98.59%), Query Frame = 3

Query: 3   KVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFQFLEGDSFSTGSVMHWQYHLGSPAAAK 62
           KV LKSPPEKFYGFFRNHMGDLV+M+P++FQSFQFLEG+SF+TGSVMHWQYHLGSPAAAK
Sbjct: 10  KVPLKSPPEKFYGFFRNHMGDLVHMFPDNFQSFQFLEGESFTTGSVMHWQYHLGSPAAAK 69

Query: 63  IKMRLVDDVKR 122
           IKMR+VDDVK+
Sbjct: 70  IKMRVVDDVKK 80

Query: 123 182
           
Sbjct: 130 80

Query: 183 216
           
Sbjct: 190 80

BLAST of WMU43809 vs. NCBI nr
Match: gi|659114589|ref|XP_008457130.1| (PREDICTED: MLP-like protein 31 [Cucumis melo])

HSP 1 Score: 91.3 bits (225), Expect = 7.4e-16
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 3

Query: 3   KVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFQFLEGDSFSTGSVMHWQYHLGSP--AA 62
           KVQLKS  EKFYGFFRNHMGDLVN++PE F +F  +EG  FS  +V+  +YHLGS     
Sbjct: 10  KVQLKSSIEKFYGFFRNHMGDLVNLFPEQFNNFAIVEGQKFSADTVIQLKYHLGSRQLLT 69

Query: 63  AKIKMRLVDDVKR 122
           A IK+++VDD+K+
Sbjct: 70  ANIKLKVVDDMKK 82

Query: 123 182
           
Sbjct: 130 82

Query: 183 216
           
Sbjct: 190 82

BLAST of WMU43809 vs. NCBI nr
Match: gi|778688602|ref|XP_011652791.1| (PREDICTED: uncharacterized protein LOC105435098 [Cucumis sativus])

HSP 1 Score: 88.2 bits (217), Expect = 6.3e-15
Identity = 43/73 (58.90%), Postives = 55/73 (75.34%), Query Frame = 3

Query: 3   KVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFQFLEGDSFSTGSVMHWQYHLGSP--AA 62
           KV LKS  EKFYGFFRNHM DLVNM+PE F+SF F+EG S S  +V+  +Y+LGS     
Sbjct: 10  KVHLKSSIEKFYGFFRNHMEDLVNMFPEQFKSFAFVEGQSLSADTVVQLEYNLGSHQLLT 69

Query: 63  AKIKMRLVDDVKR 122
           A IK+++VDD+K+
Sbjct: 70  ANIKLKVVDDMKK 82

Query: 123 182
           
Sbjct: 130 82

Query: 183 216
           
Sbjct: 190 82

BLAST of WMU43809 vs. NCBI nr
Match: gi|477504344|dbj|BAN14689.1| (major latex-like protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 85.1 bits (209), Expect = 5.3e-14
Identity = 40/72 (55.56%), Postives = 54/72 (75.00%), Query Frame = 3

Query: 3   KVQLKSPPEKFYGFFRNHMGDLVNMYPEHFQSFQFLEGDSFSTGSVMHWQYHLGSP-AAA 62
           KV LKS PEK YGFFRNH+GDLV+++PE +QS Q +EG  FS+GSV+ +++  G    A 
Sbjct: 10  KVDLKSSPEKVYGFFRNHLGDLVDLFPETYQSIQLVEGQHFSSGSVVQFKFQFGDELRAE 69

Query: 63  KIKMRLVDDVKR 122
           K  +R+VDDVK+
Sbjct: 70  KWAIRVVDDVKK 81

Query: 123 182
           
Sbjct: 130 81

Query: 183 216
           
Sbjct: 190 81

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659114461|ref|XP_008457062.1|3.7e-3190.14PREDICTED: MLP-like protein 423 [Cucumis melo][more]
gi|449464144|ref|XP_004149789.1|4.1e-3087.32PREDICTED: MLP-like protein 34 [Cucumis sativus][more]
gi|659114589|ref|XP_008457130.1|7.4e-1658.90PREDICTED: MLP-like protein 31 [Cucumis melo][more]
gi|778688602|ref|XP_011652791.1|6.3e-1558.90PREDICTED: uncharacterized protein LOC105435098 [Cucumis sativus][more]
gi|477504344|dbj|BAN14689.1|5.3e-1455.56major latex-like protein [Cucurbita pepo subsp. pepo][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR000916Bet_v_I/MLP
IPR023393START-like_dom_sf
Vocabulary: Biological Process
TermDefinition
GO:0006952defense response
GO:0009607response to biotic stimulus
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006952 defense response
biological_process GO:0009607 response to biotic stimulus

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla013180Cla013180gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
SSH0001599SSH0001599EST
SSH0001714SSH0001714EST
SSH0003474SSH0003474EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000916Bet v I/Major latex proteinPFAMPF00407Bet_v_1coord: 3..69
score: 8.7
IPR023393START-like domainGENE3DG3DSA:3.30.530.20coord: 2..72
score: 3.2
NoneNo IPR availableunknownSSF55961Bet v1-likecoord: 3..72
score: 8.5