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The following sequences are available for this feature:
transcribed_cluster sequence CATACCCACAAGAAACAGATTTATTGGAGCTCCCGTACACTCTTCAGCAAATACCACGGTTTGAGATTCTGACTAACTTACAGAAAAACCAAAAGGTAATAGACATAGAAAATGTGCCTCAACTGAGGCTTGCACCACCAGCCGTCTACCATGACAAGGTCACAAAAGGATATCATCTTCTAGTGGGAGAAAGCAGGGGTGGAATAGAAAAAGTAGAAAAGCTAAATAAGAGCAGGCAACTGACGGAGGTAAAAGTGAAGAGACCGTCCTCCCTTCGATTCCCTTTAAAAGCGAGTCTATTTGGAAAAGCGAAGACCAATTCTTGACAGAGTACGGAAGCGACTATTTAATTATAAACCAATGTGATAAGGTGCTTTTGGGTAGCTATAACTCTGCGTCTCTCCCTCTCAAATTCAGAAGGGAAGAATGACATTTTGCATCTGTAAATACAAATACGAAGGTAGTTAGTTAATAACGTATTTAGTTAGAGTAAATGGTATGAGCTATAAA
BLAST of WMU43719 vs. TAIR10
Match: AT4G00800.1 (AT4G00800.1 transducin family protein / WD-40 repeat family protein) HSP 1 Score: 70.9 bits (172), Expect = 8.7e-13 Identity = 36/79 (45.57%), Postives = 52/79 (65.82%), Query Frame = 3 Query: 3 YPQETDLLELPYTLQQIPRFEILTNLQKNQKVIDIENVPQLRLAPPAVYHDKVTKGYHLL 62 Y E ++ + + QQ+ RFEILTNLQK+Q+++ IE++P+LRLAPPAVYH+KV++ Sbjct: 1819 YSHENEMSDHSHN-QQLSRFEILTNLQKDQRLVQIESLPRLRLAPPAVYHEKVSRLSGFT 1878
Query: 63 VGESRGGIEKVEKLNKSRQ 122 GES G K K + ++ Sbjct: 1879 PGESSGKDTKPVKTGQGKK 1896
Query: 123 182 Sbjct: 1939 1896
Query: 183 240 Sbjct: 1999 1896
BLAST of WMU43719 vs. NCBI nr
Match: gi|659074757|ref|XP_008437780.1| (PREDICTED: vacuolar protein sorting-associated protein 8 homolog [Cucumis melo]) HSP 1 Score: 196.8 bits (499), Expect = 3.0e-47 Identity = 101/108 (93.52%), Postives = 103/108 (95.37%), Query Frame = 3 Query: 3 YPQETDLLELPYTLQQIPRFEILTNLQKNQKVIDIENVPQLRLAPPAVYHDKVTKGYHLL 62 YPQETD+LELPYTLQQIPRFEILTNLQKNQ+VIDIENVPQLRLAPPAVYHDKVTKGYHLL Sbjct: 1858 YPQETDILELPYTLQQIPRFEILTNLQKNQRVIDIENVPQLRLAPPAVYHDKVTKGYHLL 1917
Query: 63 VGESRGGIEKVEKLNKSRQLTEVKVKRPSSLRFPLKASLFGKAK-TNS 122 VGES G EKVEKLNKSRQLTEVKVKRPSSLRFPLKASLFGK K TNS Sbjct: 1918 VGESSSGREKVEKLNKSRQLTEVKVKRPSSLRFPLKASLFGKEKMTNS 1965
Query: 123 182 Sbjct: 1978 1965
Query: 183 242 Sbjct: 2038 1965
Query: 243 302 Sbjct: 2098 1965
Query: 303 324 Sbjct: 2158 1965
BLAST of WMU43719 vs. NCBI nr
Match: gi|778676625|ref|XP_011650623.1| (PREDICTED: vacuolar protein sorting-associated protein 8 homolog [Cucumis sativus]) HSP 1 Score: 195.7 bits (496), Expect = 6.7e-47 Identity = 101/108 (93.52%), Postives = 102/108 (94.44%), Query Frame = 3 Query: 3 YPQETDLLELPYTLQQIPRFEILTNLQKNQKVIDIENVPQLRLAPPAVYHDKVTKGYHLL 62 YPQETDLLELPYTLQQIPRFEILTNLQKNQ+VIDIENVPQLRLAPPAVYHDKVTKGYHLL Sbjct: 1853 YPQETDLLELPYTLQQIPRFEILTNLQKNQRVIDIENVPQLRLAPPAVYHDKVTKGYHLL 1912
Query: 63 VGESRGGIEKVEKLNKSRQLTEVKVKRPSSLRFPLKASLFGKAK-TNS 122 VGES GG EKVEKLNKSRQLT VKVKRPSSLRFPLK SLFGK K TNS Sbjct: 1913 VGESSGGREKVEKLNKSRQLTGVKVKRPSSLRFPLKTSLFGKEKMTNS 1960
Query: 123 182 Sbjct: 1973 1960
Query: 183 242 Sbjct: 2033 1960
Query: 243 302 Sbjct: 2093 1960
Query: 303 324 Sbjct: 2153 1960
BLAST of WMU43719 vs. NCBI nr
Match: gi|296089008|emb|CBI38711.3| (unnamed protein product [Vitis vinifera]) HSP 1 Score: 135.6 bits (340), Expect = 8.2e-29 Identity = 67/106 (63.21%), Postives = 85/106 (80.19%), Query Frame = 3 Query: 3 YPQETDLLELPYTLQQIPRFEILTNLQKNQKVIDIENVPQLRLAPPAVYHDKVTKGYHLL 62 +P E D+LE PY LQQIPRFEIL NLQK+++ I IEN+PQLRLAPPAVYH+KV KG L Sbjct: 1828 HPHENDVLENPYGLQQIPRFEILNNLQKDKRAIQIENLPQLRLAPPAVYHEKVAKGIDFL 1887
Query: 63 VGESRGGIEKVEKLNKSRQLTEVKVKRPSSLRFPLKASLFGKAKTN 122 GES + K+EK +K+RQL E+K ++ SS+RFPLK+S+FGK KT+ Sbjct: 1888 TGESSSALAKIEKPSKTRQLRELK-EKGSSIRFPLKSSIFGKEKTS 1932
Query: 123 182 Sbjct: 1948 1932
Query: 183 242 Sbjct: 2008 1932
Query: 243 302 Sbjct: 2068 1932
Query: 303 321 Sbjct: 2128 1932
BLAST of WMU43719 vs. NCBI nr
Match: gi|731420761|ref|XP_002267626.3| (PREDICTED: vacuolar protein sorting-associated protein 8 homolog isoform X1 [Vitis vinifera]) HSP 1 Score: 135.6 bits (340), Expect = 8.2e-29 Identity = 67/106 (63.21%), Postives = 85/106 (80.19%), Query Frame = 3 Query: 3 YPQETDLLELPYTLQQIPRFEILTNLQKNQKVIDIENVPQLRLAPPAVYHDKVTKGYHLL 62 +P E D+LE PY LQQIPRFEIL NLQK+++ I IEN+PQLRLAPPAVYH+KV KG L Sbjct: 1882 HPHENDVLENPYGLQQIPRFEILNNLQKDKRAIQIENLPQLRLAPPAVYHEKVAKGIDFL 1941
Query: 63 VGESRGGIEKVEKLNKSRQLTEVKVKRPSSLRFPLKASLFGKAKTN 122 GES + K+EK +K+RQL E+K ++ SS+RFPLK+S+FGK KT+ Sbjct: 1942 TGESSSALAKIEKPSKTRQLRELK-EKGSSIRFPLKSSIFGKEKTS 1986
Query: 123 182 Sbjct: 2002 1986
Query: 183 242 Sbjct: 2062 1986
Query: 243 302 Sbjct: 2122 1986
Query: 303 321 Sbjct: 2182 1986
BLAST of WMU43719 vs. NCBI nr
Match: gi|743790622|ref|XP_011039285.1| (PREDICTED: vacuolar protein sorting-associated protein 8 homolog isoform X1 [Populus euphratica]) HSP 1 Score: 125.9 bits (315), Expect = 6.5e-26 Identity = 68/106 (64.15%), Postives = 84/106 (79.25%), Query Frame = 3 Query: 3 YPQETDLLELPYTLQQIPRFEILTNLQKNQKVIDIENVPQLRLAPPAVYHDKVTKGYHLL 62 +P E DLLE Y LQQI RFEIL++LQK++K++ IE++PQLRLAPPAVYH+KV KG LL Sbjct: 1824 HPHE-DLLENSYGLQQISRFEILSSLQKDKKLVQIESMPQLRLAPPAVYHEKVKKGPDLL 1883
Query: 63 VGESRGGIEKVEKLNKSRQLTEVKVKRPSSLRFPLKASLFGKAKTN 122 GES + +VEK K RQL E+K+K SSLRFPLK+S+FGK KTN Sbjct: 1884 TGESSSALAEVEKPGKRRQLRELKLK-GSSLRFPLKSSIFGKEKTN 1927
Query: 123 182 Sbjct: 1944 1927
Query: 183 242 Sbjct: 2004 1927
Query: 243 302 Sbjct: 2064 1927
Query: 303 321 Sbjct: 2124 1927
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
AT4G00800.1 | 8.7e-13 | 45.57 | transducin family protein / WD-40 repeat family protein | [more] |
This transcribed_cluster is associated with the following gene feature(s):
Feature Name | Unique Name | Type |
Cla021084 | Cla021084 | gene |
The following EST feature(s) are a part of this transcribed_cluster:
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