WMU43523 (transcribed_cluster) Watermelon (97103) v1

NameWMU43523
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionNo hit
LocationChr3 : 17247732 .. 17248735 (-)
Sequence length563
The following sequences are available for this feature:

transcribed_cluster sequence

ACCAAAATAAGCGTGGTTTTACGGGACCGTTCAAGAATTTGAAGGATGAAGAAAAGTTGCTGGTATATAACGATATAATTGAGGCTTCTGGGCGAGGAAGTGTGATAGCAGACACATTATCAACCATTTCTGGTGTAGCCGGTATTCTGTTTCTCATCCTTGCAACTGGAATTATGGTATGGGACATCTTTACAGCTGAACATGTTCTCCAAACAGCAACAAAGGATGTTATGGTGACTGCTGCGGCAGTGGGTGGGGCAATGGTTGGACAAGTTGTCGGAGCTGCCTTGCCAACATTGGTTGGCGTCGAAGCTTCTGCTCTGTTTGTGATGGCCACTGCAGTTATATGTTGCATTGTGGGAGCCTTTGTGCTAGGTGCTTTTGTCGGTTGGTTGGTTGATCTTATCTTTAGCTCTGGAGGCGATTATCCCCTTAGCACTGATGGCCACACTTGTTATGTCGCCCCATTGCCTGATGGCGAGGCTGTGGCACGTCAAATTGCTCATCAGTAAAATTCTGAGGCTATTGCAAGACTCTCTAAGTAAAATAAGTTGGAAATAAGT
BLAST of WMU43523 vs. NCBI nr
Match: gi|659085855|ref|XP_008443644.1| (PREDICTED: uncharacterized protein LOC103487192 [Cucumis melo])

HSP 1 Score: 242.3 bits (617), Expect = 6.9e-61
Identity = 127/169 (75.15%), Postives = 137/169 (81.07%), Query Frame = 3

Query: 3   QNKRGFTGPFKNLKDEEKLLVYNDIIEASGRGSVIADTLSTISGVAGILFLILATGIMVW 62
           QNKRGF+G FKNL DEEKLLVYNDII ASGRGSV+ADTLSTISGVAGILFLILATG++VW
Sbjct: 177 QNKRGFSGLFKNLTDEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILATGVIVW 236

Query: 63  DIFTAEHVLQTATKDXXXXXXXXXXXXXXXXXXXXLPTLVGVEASALFVMATAVICCIVG 122
           DIFT+EHVLQT TKD                    LPTL GVEASALF+MATAVI  +VG
Sbjct: 237 DIFTSEHVLQTVTKDVMVTVATVGGAMVGQVVGAALPTLAGVEASALFLMATAVIGSVVG 296

Query: 123 AFVLGAFVGWLVDLIFSSGGDYPLSTDGHTCYVAPLPDGEAVARQIAHQ 182
           AFV+GAFVGWLVD IFSSGG YP +TD HTCYVAPLPDGEA+ARQI HQ
Sbjct: 297 AFVVGAFVGWLVDHIFSSGGHYPHNTDNHTCYVAPLPDGEAIARQIVHQ 345

Query: 183 242
           
Sbjct: 357 345

Query: 243 302
           
Sbjct: 417 345

Query: 303 362
           
Sbjct: 477 345

Query: 363 422
           
Sbjct: 537 345

Query: 423 482
           
Sbjct: 597 345

Query: 483 510
           
Sbjct: 657 345

BLAST of WMU43523 vs. NCBI nr
Match: gi|449442773|ref|XP_004139155.1| (PREDICTED: uncharacterized protein LOC101203466 [Cucumis sativus])

HSP 1 Score: 240.0 bits (611), Expect = 3.4e-60
Identity = 128/169 (75.74%), Postives = 135/169 (79.88%), Query Frame = 3

Query: 3   QNKRGFTGPFKNLKDEEKLLVYNDIIEASGRGSVIADTLSTISGVAGILFLILATGIMVW 62
           QNKRGF+G FKNL DEEKLLVYNDII ASGRGSV+ADTLSTISGVAGILFLILA G++VW
Sbjct: 177 QNKRGFSGLFKNLADEEKLLVYNDIIVASGRGSVVADTLSTISGVAGILFLILAAGVIVW 236

Query: 63  DIFTAEHVLQTATKDXXXXXXXXXXXXXXXXXXXXLPTLVGVEASALFVMATAVICCIVG 122
           DIFTAEHVLQTATKD                    LPTL GVEASALF+MATAVI  IVG
Sbjct: 237 DIFTAEHVLQTATKDVMMTVATVGGAMVGQVVGAALPTLAGVEASALFLMATAVIGSIVG 296

Query: 123 AFVLGAFVGWLVDLIFSSGGDYPLSTDGHTCYVAPLPDGEAVARQIAHQ 182
           AFV+GAFVGWLVD IFSSGG Y   TD HTCYVAPLPDGEA+ARQI HQ
Sbjct: 297 AFVVGAFVGWLVDHIFSSGGHYSHETDSHTCYVAPLPDGEAIARQIVHQ 345

Query: 183 242
           
Sbjct: 357 345

Query: 243 302
           
Sbjct: 417 345

Query: 303 362
           
Sbjct: 477 345

Query: 363 422
           
Sbjct: 537 345

Query: 423 482
           
Sbjct: 597 345

Query: 483 510
           
Sbjct: 657 345

BLAST of WMU43523 vs. NCBI nr
Match: gi|657954699|ref|XP_008368796.1| (PREDICTED: uncharacterized protein LOC103432385 [Malus domestica])

HSP 1 Score: 140.2 bits (352), Expect = 3.7e-30
Identity = 80/168 (47.62%), Postives = 101/168 (60.12%), Query Frame = 3

Query: 3   QNKRGFTGPFKNLKDEEKLLVYNDIIEASGRGSVIADTLSTISGVAGILFLILATGIMVW 62
           Q K  F G FK+LKD +K+ VY +IIEASGRG V    LS + GVAGI   + + G+ VW
Sbjct: 172 QAKLKFRGRFKDLKDVQKIQVYEEIIEASGRGKVKGHRLSKVLGVAGISVFLFSAGVTVW 231

Query: 63  DIFTAEHVLQTATKDXXXXXXXXXXXXXXXXXXXXLPTLVGVEASALFVMATAVICCIVG 122
           +I+ A++ LQTAT+                     L + + V    LFV+   +I  I G
Sbjct: 232 EIYLADNPLQTATRAAVVAMSSVGGATLGSAIGVALSSCLPVHP--LFVVMAGIIVSIAG 291

Query: 123 AFVLGAFVGWLVDLIFSSGGDYPLSTDGHTCYVAPLPDGEAVARQIAH 182
           AF+LG F GWLVDLIF SGG   LST+G  CYVAP+PDG A+ARQI H
Sbjct: 292 AFILGDFAGWLVDLIFKSGGSTTLSTEGLRCYVAPMPDGVALARQILH 337

Query: 183 242
           
Sbjct: 352 337

Query: 243 302
           
Sbjct: 412 337

Query: 303 362
           
Sbjct: 472 337

Query: 363 422
           
Sbjct: 532 337

Query: 423 482
           
Sbjct: 592 337

Query: 483 507
           
Sbjct: 652 337

BLAST of WMU43523 vs. NCBI nr
Match: gi|694407169|ref|XP_009378339.1| (PREDICTED: uncharacterized protein LOC103966850 [Pyrus x bretschneideri])

HSP 1 Score: 129.4 bits (324), Expect = 6.5e-27
Identity = 75/170 (44.12%), Postives = 99/170 (58.24%), Query Frame = 3

Query: 3   QNKRGFTGP-FKNLKDEEKLLVYNDIIEASGRGSVIADTLSTISGVAGILFLILATGIMV 62
           Q   G+ G  F+ L+D  K+ V+  II ASGR ++     S + G AGI  LI ATG MV
Sbjct: 179 QTDLGYGGRLFEELEDVVKIRVFGKIIFASGRANINVTAYSKMFGAAGIAVLIFATGFMV 238

Query: 63  WDIFTAEHVLQTATKDXXXXXXXXXXXXXXXXXXXXLPTLVGVEASALFVMATAVICCIV 122
           WDIF+A++ LQTA +D                    L ++V   A+AL V+   +   I 
Sbjct: 239 WDIFSADNPLQTAARDAVVTAASIGGAMIGEVVGVALASMV--TANALLVLMAGITAGIA 298

Query: 123 GAFVLGAFVGWLVDLIFSSGGDYPLSTDGHTCYVAPLPDGEAVARQIAHQ 182
           GAF++G F  WL+D++F SGG  PLST GH CYVA LPDG  +AR+IAHQ
Sbjct: 299 GAFLIGEFATWLIDVVFGSGGSAPLSTMGHRCYVAHLPDGSVLARRIAHQ 346

Query: 183 242
           
Sbjct: 359 346

Query: 243 302
           
Sbjct: 419 346

Query: 303 362
           
Sbjct: 479 346

Query: 363 422
           
Sbjct: 539 346

Query: 423 482
           
Sbjct: 599 346

Query: 483 510
           
Sbjct: 659 346

BLAST of WMU43523 vs. NCBI nr
Match: gi|657999600|ref|XP_008392236.1| (PREDICTED: uncharacterized protein LOC103454422 [Malus domestica])

HSP 1 Score: 126.3 bits (316), Expect = 5.5e-26
Identity = 71/160 (44.38%), Postives = 94/160 (58.75%), Query Frame = 3

Query: 30  FKNLKDEEKLLVYNDIIEASGRGSVIADTLSTISGVAGILFLILATGIMVWDIFTAEHVL 89
           F +L+D EK+ VY  II  SGR ++     S I G AGI  LILA GI+VWDI++A++ L
Sbjct: 189 FADLEDFEKIKVYGTIISKSGRANIDVTAYSKIFGAAGIAVLILAAGILVWDIYSADNPL 248

Query: 90  QTATKDXXXXXXXXXXXXXXXXXXXXLPTLVGVEASALFVMATAVICCIVGAFVLGAFVG 149
           QTA +D                    L ++V    +AL V+   +   I GAF++G F  
Sbjct: 249 QTAARDAVTTAAAIGGAMIGEVVGVALASMV--TGNALLVLMAGITAGIAGAFLIGEFAI 308

Query: 150 WLVDLIFSSGGDYPLSTDGHTCYVAPLPDGEAVARQIAHQ 209
           WL+++IF SGG  PLST GH CYV  LP+G  +ARQIAHQ
Sbjct: 309 WLINVIFGSGGSAPLSTMGHRCYVTQLPEGSVLARQIAHQ 346

Query: 210 269
           
Sbjct: 369 346

Query: 270 329
           
Sbjct: 429 346

Query: 330 389
           
Sbjct: 489 346

Query: 390 449
           
Sbjct: 549 346

Query: 450 509
           
Sbjct: 609 346

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
gi|659085855|ref|XP_008443644.1|6.9e-6175.15PREDICTED: uncharacterized protein LOC103487192 [Cucumis melo][more]
gi|449442773|ref|XP_004139155.1|3.4e-6075.74PREDICTED: uncharacterized protein LOC101203466 [Cucumis sativus][more]
gi|657954699|ref|XP_008368796.1|3.7e-3047.62PREDICTED: uncharacterized protein LOC103432385 [Malus domestica][more]
gi|694407169|ref|XP_009378339.1|6.5e-2744.12PREDICTED: uncharacterized protein LOC103966850 [Pyrus x bretschneideri][more]
gi|657999600|ref|XP_008392236.1|5.5e-2644.38PREDICTED: uncharacterized protein LOC103454422 [Malus domestica][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla002543Cla002543gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
SSH0003166SSH0003166EST
SSH0003382SSH0003382EST