WMU42256 (transcribed_cluster) Watermelon (97103) v1

NameWMU42256
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionMICAL C-terminal-like protein, putative
LocationChr4 : 10129481 .. 10132200 (+)
Sequence length413
The following sequences are available for this feature:

transcribed_cluster sequence

GGAAGTTTGGCAACAATGGCGGAACCATTTGGCGGCGTCAACTACGATCTTGAGCAGACCTTGAAGCCCTTCTTCCAAAGAGCTTCTGAAGCTGAGTTTGTTTTGCAGACTAAAGTTGAAATCCATCTGAATAATGCTGCACGAAAAGAATTATGCTTTTAGTTTATTCAGGATCGTTTTGTCAAGATTAGAAGATGCACTCTTGAGTAAGAAAGACGTCCATAACAAAGATCATCTGAAAACAATAAGCGAACTCCAGTCGAAGCTAGACAGCACAAACGAAGCGCTAATCGAAGAACGGAAAAAGGCTGAGATGGTTGCTGCAGAAAATGCTAAGCTTCAGTATCGCATAATCCATCTTGTGAGGACAGCTAGGGAAACCGATTAAAAGTTGGAGAAAGAATGTTTCTTTT
BLAST of WMU42256 vs. TAIR10
Match: AT3G57320.1 (AT3G57320.1 unknown protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.4e-08
Identity = 31/75 (41.33%), Postives = 47/75 (62.67%), Query Frame = 2

Query: 179 LSRLEDALLSKK-DVHNKDHLKTISELQSKLDSTNEALIEERKKAEMVAAENAKLQYRII 238
           L++LE AL S K D+ +   ++   +LQSKL+  N  + +E+ K + +  ENAK +YRI+
Sbjct: 25  LAKLEAALASTKTDIPDAKLVEENKQLQSKLEEANATVKQEQTKVKDLTIENAKHKYRIL 84

Query: 239 HLVRTARETD*KLEK 298
           HLVR  ++ D KLE+
Sbjct: 85  HLVRALKDADQKLER 99

Query: 299 358
           
Sbjct: 145 99

Query: 359 401
           
Sbjct: 205 99

BLAST of WMU42256 vs. NCBI nr
Match: gi|659129281|ref|XP_008464609.1| (PREDICTED: uncharacterized protein LOC103502450 isoform X2 [Cucumis melo])

HSP 1 Score: 112.1 bits (279), Expect = 7.9e-22
Identity = 60/68 (88.24%), Postives = 63/68 (92.65%), Query Frame = 2

Query: 179 LSRLEDALLSKKDVHNKDHLKTISELQSKLDSTNEALIEERKKAEMVAAENAKLQYRIIH 238
           LSRLE ALLSKKD HN++HLKTISELQ+KLDS N ALIEERKKAEMVA ENAKLQYRIIH
Sbjct: 30  LSRLEAALLSKKDDHNEEHLKTISELQTKLDSANNALIEERKKAEMVAEENAKLQYRIIH 89

Query: 239 LVRTARET 298
           LVRTARET
Sbjct: 90  LVRTARET 97

Query: 299 358
           
Sbjct: 150 97

Query: 359 383
           
Sbjct: 210 97

BLAST of WMU42256 vs. NCBI nr
Match: gi|1009159888|ref|XP_015898059.1| (PREDICTED: uncharacterized protein LOC107431605 [Ziziphus jujuba])

HSP 1 Score: 87.4 bits (215), Expect = 2.1e-14
Identity = 47/73 (64.38%), Postives = 56/73 (76.71%), Query Frame = 2

Query: 179 LSRLEDALLSKKDVHNKDHLKTISELQSKLDSTNEALIEERKKAEMVAAENAKLQYRIIH 238
           LSRLE AL SKKD  N +HLKTI+ELQSKL+  +  LI ER++   +AAENAKLQYRI H
Sbjct: 28  LSRLETALASKKDTGNVEHLKTINELQSKLEDAHAQLISEREEGRKLAAENAKLQYRIHH 87

Query: 239 LVRTARETD*KLE 298
           LVR  RE+D K+E
Sbjct: 88  LVRAVRESDQKME 100

Query: 299 358
           
Sbjct: 148 100

Query: 359 398
           
Sbjct: 208 100

BLAST of WMU42256 vs. NCBI nr
Match: gi|351724963|ref|NP_001236820.1| (uncharacterized protein LOC100527237 [Glycine max])

HSP 1 Score: 85.5 bits (210), Expect = 7.9e-14
Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 2

Query: 179 LSRLEDALLSKKDVHNKDHLKTISELQSKLDSTNEALIEERKKAEMVAAENAKLQYRIIH 238
           LSRLE AL SKK   N+++LK I++LQSKL+  N  LI E++KA+M+ AENAKLQYRIIH
Sbjct: 28  LSRLEAALNSKKGTGNEENLKVINDLQSKLEVANVELISEKEKAQMLVAENAKLQYRIIH 87

Query: 239 LVRTARETD*KLEK 298
           L+R  +E D KLEK
Sbjct: 88  LLRALKEADLKLEK 101

Query: 299 358
           
Sbjct: 148 101

Query: 359 401
           
Sbjct: 208 101

BLAST of WMU42256 vs. NCBI nr
Match: gi|1021480783|ref|XP_016183537.1| (PREDICTED: uncharacterized protein LOC107625423 [Arachis ipaensis])

HSP 1 Score: 83.2 bits (204), Expect = 3.9e-13
Identity = 42/74 (56.76%), Postives = 59/74 (79.73%), Query Frame = 2

Query: 179 LSRLEDALLSKKDVHNKDHLKTISELQSKLDSTNEALIEERKKAEMVAAENAKLQYRIIH 238
           L RLE +L ++KD  N++HLKTI++LQSKL+ +N  LI E++KA+ +AAEN KLQYRIIH
Sbjct: 28  LQRLEASLNARKDAGNEEHLKTINDLQSKLEVSNAELISEKEKAQKLAAENEKLQYRIIH 87

Query: 239 LVRTARETD*KLEK 298
           L+R  ++ D KLE+
Sbjct: 88  LLRALKDNDQKLEQ 101

Query: 299 358
           
Sbjct: 148 101

Query: 359 401
           
Sbjct: 208 101

BLAST of WMU42256 vs. NCBI nr
Match: gi|1012019867|ref|XP_015949674.1| (PREDICTED: uncharacterized protein LOC107474568 [Arachis duranensis])

HSP 1 Score: 82.8 bits (203), Expect = 5.1e-13
Identity = 42/74 (56.76%), Postives = 59/74 (79.73%), Query Frame = 2

Query: 179 LSRLEDALLSKKDVHNKDHLKTISELQSKLDSTNEALIEERKKAEMVAAENAKLQYRIIH 238
           L RLE +L ++KD  N++HLKTI++LQSKL+ +N  LI E++KA+ +AAEN KLQYRIIH
Sbjct: 28  LQRLEASLNARKDAGNEEHLKTINDLQSKLEVSNADLISEKEKAQKLAAENEKLQYRIIH 87

Query: 239 LVRTARETD*KLEK 298
           L+R  ++ D KLE+
Sbjct: 88  LLRALKDNDQKLEQ 101

Query: 299 358
           
Sbjct: 148 101

Query: 359 401
           
Sbjct: 208 101

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT3G57320.11.4e-0841.33 unknown protein[more]
Match NameE-valueIdentityDescription
gi|659129281|ref|XP_008464609.1|7.9e-2288.24PREDICTED: uncharacterized protein LOC103502450 isoform X2 [Cucumis melo][more]
gi|1009159888|ref|XP_015898059.1|2.1e-1464.38PREDICTED: uncharacterized protein LOC107431605 [Ziziphus jujuba][more]
gi|351724963|ref|NP_001236820.1|7.9e-1462.16uncharacterized protein LOC100527237 [Glycine max][more]
gi|1021480783|ref|XP_016183537.1|3.9e-1356.76PREDICTED: uncharacterized protein LOC107625423 [Arachis ipaensis][more]
gi|1012019867|ref|XP_015949674.1|5.1e-1356.76PREDICTED: uncharacterized protein LOC107474568 [Arachis duranensis][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla006844Cla006844gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0024182S1_0024182EST
S2_0102450S2_0102450EST
S3_0058808S3_0058808EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 70..97
scor
NoneNo IPR availablePANTHERPTHR38377FAMILY NOT NAMEDcoord: 4..27
score: 4.8E-20coord: 53..123
score: 4.8
NoneNo IPR availablePANTHERPTHR38377:SF1SUBFAMILY NOT NAMEDcoord: 53..123
score: 4.8E-20coord: 4..27
score: 4.8