WMU42182 (transcribed_cluster) Watermelon (97103) v1

NameWMU42182
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr5 : 2804039 .. 2804640 (+)
Sequence length606
The following sequences are available for this feature:

transcribed_cluster sequence

CATACAGTTCCTGATCATCTTCCTCTTCCTCCTCCTCCTCCTCCCCACCGCTATCCGATTCCTCCGGCTTCGCAGACGGCCCTTTCTCCATAGCATCCATCCGCTTAAAATGAACCCAAGAAGACGTAAATCGCGAAAGCGGCATAGACCGAGCCCGTTGAAGCTCAGTACGGTACCGTTTCCTTAGTTTCTTCCATCTTATTGACGACACTGCACGGCGGTCTTCGGCGGCGATGCGTTAGGACATCGATGAGAAACGGAATCGGCAACATCCTGCCAGTGAGTAGCCTTGAGATTCCCCCGGCGAAAGGGGAATACCACTTATCCCTATAAGAATCGATGAGAGCAATCGTCTCTTCATGGGACCAACACGGAGGCGGAAGACGGCGAGAAGAAGCCGTAGGTTGCGGCGGCGGATTGGGAAGGAGGAGGGAGAGGAGCAGAAAGGGTAAGGGCTTGAAGGGGATTGGAAGGATGAGAAGAAGAAGGGGGAGATCCATCGATAGGAGAGGAAGGAGATCCCATAGTAAAAGAGAAAGAAATCAGAGATCTGAAGAGAAATCAGAAAGGGGGAAAAAGGGTAGATCTGAAGAAGAAGAAGAAGAA
BLAST of WMU42182 vs. TAIR10
Match: AT2G44730.1 (AT2G44730.1 Alcohol dehydrogenase transcription factor Myb/SANT-like family protein)

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-12
Identity = 31/44 (70.45%), Postives = 36/44 (81.82%), Query Frame = -3

Query: 68  RWKKLRKRYRTELQRARSMPLSRFTSSWVHFKRMDAMEKGPSAK 127
           + +KLRKRYRTE+QRARS+P++RF SSWVHFKRM+AME  P  K
Sbjct: 119 KMEKLRKRYRTEIQRARSVPVARFISSWVHFKRMEAMENRPEIK 162

Query: 128 187
           
Sbjct: 179 162

Query: 188 200
           
Sbjct: 239 162


HSP 2 Score: 61.6 bits (148), Expect = 6.3e-10
Identity = 29/39 (74.36%), Postives = 30/39 (76.92%), Query Frame = -2

Query: 294 PTAS--SRRLPPPCWSHEETIALIDSYRDKWYSPFAGGI 353
           PTAS  SRRLPPPCWS EETIALID+YRDKWY+   G +
Sbjct: 50  PTASKNSRRLPPPCWSLEETIALIDAYRDKWYALNRGNL 88

Query: 354 405
           
Sbjct: 110 88


HSP 3 Score: 49.3 bits (116), Expect = 3.3e-06
Identity = 20/37 (54.05%), Postives = 24/37 (64.86%), Query Frame = -1

Query: 205 FPFRRGNLKATHWQDVADSVSHRCPNASPPKTAVQCR 264
           +   RGNLKA HW++VA++V   CP+    KTAVQCR
Sbjct: 81  YALNRGNLKANHWEEVAEAVGANCPDVILKKTAVQCR 117

Query: 265 316
           
Sbjct: 141 117

BLAST of WMU42182 vs. NCBI nr
Match: gi|449432382|ref|XP_004133978.1| (PREDICTED: trihelix transcription factor ASIL2 isoform X1 [Cucumis sativus])

HSP 1 Score: 89.0 bits (219), Expect = 1.0e-14
Identity = 46/66 (69.70%), Postives = 48/66 (72.73%), Query Frame = -3

Query: 2   RWKKLRKRYRTELQRARSMPLSRFTSSWVHFKRMDAMEKGPSAKPXXXXXXXXXXXXXXX 61
           + +KLRKRYRTELQRARSMPLSRFTSSWVHFKRMDAMEKGPSAKP               
Sbjct: 113 KMEKLRKRYRTELQRARSMPLSRFTSSWVHFKRMDAMEKGPSAKPEESDSGGEEEEEEEE 172

Query: 62  XXQELY 121
             QELY
Sbjct: 173 DDQELY 178

Query: 122 181
           
Sbjct: 233 178

Query: 182 200
           
Sbjct: 293 178

BLAST of WMU42182 vs. NCBI nr
Match: gi|659075756|ref|XP_008438313.1| (PREDICTED: B-cell lymphoma/leukemia 11B [Cucumis melo])

HSP 1 Score: 89.0 bits (219), Expect = 1.0e-14
Identity = 46/66 (69.70%), Postives = 48/66 (72.73%), Query Frame = -3

Query: 2   RWKKLRKRYRTELQRARSMPLSRFTSSWVHFKRMDAMEKGPSAKPXXXXXXXXXXXXXXX 61
           + +KLRKRYRTELQRARSMPLSRFTSSWVHFKRMDAMEKGPSAKP               
Sbjct: 113 KMEKLRKRYRTELQRARSMPLSRFTSSWVHFKRMDAMEKGPSAKPEESDSGGEEEEEEEE 172

Query: 62  XXQELY 121
             QELY
Sbjct: 173 DDQELY 178

Query: 122 181
           
Sbjct: 233 178

Query: 182 200
           
Sbjct: 293 178

BLAST of WMU42182 vs. NCBI nr
Match: gi|590724132|ref|XP_007052379.1| (Transcription factor, putative [Theobroma cacao])

HSP 1 Score: 82.4 bits (202), Expect = 9.8e-13
Identity = 38/45 (84.44%), Postives = 43/45 (95.56%), Query Frame = -3

Query: 65  RWKKLRKRYRTELQRARSMPLSRFTSSWVHFKRMDAMEKGPSAKP 124
           + +KLRKRYRTE+QRARSMP+SRFTSSWVHFKRMDAMEKGP+ KP
Sbjct: 112 KMEKLRKRYRTEIQRARSMPVSRFTSSWVHFKRMDAMEKGPNVKP 156

Query: 125 184
           
Sbjct: 172 156

Query: 185 200
           
Sbjct: 232 156

BLAST of WMU42182 vs. NCBI nr
Match: gi|224063637|ref|XP_002301240.1| (hypothetical protein POPTR_0002s14030g [Populus trichocarpa])

HSP 1 Score: 81.3 bits (199), Expect = 2.2e-12
Identity = 38/44 (86.36%), Postives = 42/44 (95.45%), Query Frame = -3

Query: 68  RWKKLRKRYRTELQRARSMPLSRFTSSWVHFKRMDAMEKGPSAK 127
           + +KLRKRYRTE+QRARSMP+SRFTSSWVHFKRMDAMEKGP AK
Sbjct: 101 KMEKLRKRYRTEIQRARSMPVSRFTSSWVHFKRMDAMEKGPQAK 144

Query: 128 187
           
Sbjct: 161 144

Query: 188 200
           
Sbjct: 221 144

BLAST of WMU42182 vs. NCBI nr
Match: gi|743804609|ref|XP_011017396.1| (PREDICTED: trihelix transcription factor ASIL2-like [Populus euphratica])

HSP 1 Score: 81.3 bits (199), Expect = 2.2e-12
Identity = 38/44 (86.36%), Postives = 42/44 (95.45%), Query Frame = -3

Query: 68  RWKKLRKRYRTELQRARSMPLSRFTSSWVHFKRMDAMEKGPSAK 127
           + +KLRKRYRTE+QRARSMP+SRFTSSWVHFKRMDAMEKGP AK
Sbjct: 101 KMEKLRKRYRTEIQRARSMPVSRFTSSWVHFKRMDAMEKGPQAK 144

Query: 128 187
           
Sbjct: 161 144

Query: 188 200
           
Sbjct: 221 144

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT2G44730.11.8e-1270.45 Alcohol dehydrogenase transcription factor Myb/SANT-like family prot... [more]
Match NameE-valueIdentityDescription
gi|449432382|ref|XP_004133978.1|1.0e-1469.70PREDICTED: trihelix transcription factor ASIL2 isoform X1 [Cucumis sativus][more]
gi|659075756|ref|XP_008438313.1|1.0e-1469.70PREDICTED: B-cell lymphoma/leukemia 11B [Cucumis melo][more]
gi|590724132|ref|XP_007052379.1|9.8e-1384.44Transcription factor, putative [Theobroma cacao][more]
gi|224063637|ref|XP_002301240.1|2.2e-1286.36hypothetical protein POPTR_0002s14030g [Populus trichocarpa][more]
gi|743804609|ref|XP_011017396.1|2.2e-1286.36PREDICTED: trihelix transcription factor ASIL2-like [Populus euphratica][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR006578MADF-dom

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla021394Cla021394gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0073664S1_0073664EST
S2_0123396S2_0123396EST
S2_0130307S2_0130307EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006578MADF domainPFAMPF10545MADF_DNA_bdgcoord: 100..135
score: 8.
NoneNo IPR availablePANTHERPTHR31307FAMILY NOT NAMEDcoord: 93..166
score: 3.6E-36coord: 26..73
score: 3.6
NoneNo IPR availablePANTHERPTHR31307:SF3ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE PROTEINcoord: 93..166
score: 3.6E-36coord: 26..73
score: 3.6