WMU41605 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU41605
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionDigalactosyldiacylglycerol synthase 2, chloroplastic
LocationChr5 : 1616055 .. 1616420 (-)
Sequence length374
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

ATGATGCATCTGCATATTATACATTCACATGACTCTTGGATTTGAGGGGCCTCGAAGAGTTTTTGGTGCCGTCCCCGGGAGCCTGCATCCAGATGAACAACAATGCAAAAGAGCTTGGATTAGCTAGTCCTTCTAACAAAAAAAGGTTCGAGAAAGTGATTAAAAATGAATGCATGAGTTCTGATCCCCCCTTCAAAATCTTTCCAAGAATGTTAAAAATTGAAAAGATTGTTCACATTTGCCCTCCTTGTTCTTACACGTTGTGTTATTGTTGAAGCTGAGATTTGTAGTTTAGAGACATCAGGAATGATTGAAAGTGATTGTAGAAATCAGGCTTCAGGACTAATCAGGAGTAGAAGATATAATACGAAGAC
Homology
[Close]
BLAST of WMU41605 vs. NCBI nr
Match: gi|659075315|ref|XP_008438079.1| (PREDICTED: digalactosyldiacylglycerol synthase 2, chloroplastic [Cucumis melo])

HSP 1 Score: 65.1 bits (157), Expect = 1.0e-07
Identity = 27/28 (96.43%), Postives = 27/28 (96.43%), Query Frame = 2 

Query: 26  HMTLGFEGPRRVFGAVPGSLHPDEQQCK 85
           HMTLGFEG RRVFGAVPGSLHPDEQQCK
Sbjct: 427 HMTLGFEGSRRVFGAVPGSLHPDEQQCK 454

Query: 86   110
           
Sbjct: 487  454

[Close]
BLAST of WMU41605 vs. NCBI nr
Match: gi|449432175|ref|XP_004133875.1| (PREDICTED: digalactosyldiacylglycerol synthase 2, chloroplastic [Cucumis sativus])

HSP 1 Score: 63.5 bits (153), Expect = 2.9e-07
Identity = 26/28 (92.86%), Postives = 27/28 (96.43%), Query Frame = 2 

Query: 26  HMTLGFEGPRRVFGAVPGSLHPDEQQCK 85
           HM+LGFEG RRVFGAVPGSLHPDEQQCK
Sbjct: 427 HMSLGFEGSRRVFGAVPGSLHPDEQQCK 454

Query: 86   110
           
Sbjct: 487  454

The following BLAST results are available for this feature:
BLAST of WMU41605 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659075315|ref|XP_008438079.1|1.0e-0796.43PREDICTED: digalactosyldiacylglycerol synthase 2, chloroplastic [Cucumis melo][more]
gi|449432175|ref|XP_004133875.1|2.9e-0792.86PREDICTED: digalactosyldiacylglycerol synthase 2, chloroplastic [Cucumis sativus... [more]
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla021254Cla021254gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0114562S1_0114562EST
S1_0144295S1_0144295EST