WMU41555 (transcribed_cluster) Watermelon (97103) v1

NameWMU41555
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionProtein TPLATE
LocationChr5 : 7106610 .. 7106972 (+)
Sequence length368
The following sequences are available for this feature:

transcribed_cluster sequence

GTTTGGCTGCAAAAACAATGGTATGGGGGGTTTGGTTGGGGATGATGATATTCGGAGCTAGTGAAGTAAGCAGAAACGTAGATCTGGGCGATGAGACAACAACCATGCTATGCAAAATTTGTTGTTCGAGCATCTGATGCATCAATTACAAAGGAAATCGAAGTTGATCCTCAAGGTTGGTTAGATGACATAACTGATGGAGGCGTTGAGTACATGCCTGAAGAGGAAGTCAAGGTAGCTGCTGCAGAAAGGCTGAAGATATCAATGGAACGGATAGCTTTGCTCAAGGCAGCCCAACCTCCACCAAAGACCCCAAAATCAGACGATGACGACGAAGAAGAAGAAGAAGAAGCCAAAGACATCGATAG
BLAST of WMU41555 vs. TAIR10
Match: AT3G01780.1 (AT3G01780.1 ARM repeat superfamily protein)

HSP 1 Score: 106.3 bits (264), Expect = 1.4e-23
Identity = 55/68 (80.88%), Postives = 58/68 (85.29%), Query Frame = 1

Query: 115  KFVVRASDASITKEIEVDPQGWLDDITDGGVEYMPEEEVKVAAAERLKISMERIALLKAA 174
            KFVVRAS+ASITK+IE D QGW DD+TDGGVEYMPE+EVK  AAE+LKISMERIALLKAA
Sbjct: 1029 KFVVRASEASITKQIESDIQGWCDDLTDGGVEYMPEDEVKATAAEKLKISMERIALLKAA 1088

Query: 175  QPPPKTPK 234
            Q P KT K
Sbjct: 1089 Q-PKKTSK 1095

Query: 235  294
            
Sbjct: 1149 1095

Query: 295  319
            
Sbjct: 1209 1095


HSP 2 Score: 57.4 bits (137), Expect = 7.2e-09
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 3

Query: 6    AAKTMVW-GVWLGMMIFGASEVSRNVDLGDETTTMLCK 65
            AAKT  W G ++GMMIFGASEVSRN+DLGDETTTM+CK
Sbjct: 994  AAKT--WHGGFVGMMIFGASEVSRNMDLGDETTTMMCK 1029

Query: 66   117
            
Sbjct: 1054 1029

BLAST of WMU41555 vs. Swiss-Prot
Match: TPLAT_ARATH (Protein TPLATE OS=Arabidopsis thaliana GN=TPLATE PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 2.4e-22
Identity = 55/68 (80.88%), Postives = 58/68 (85.29%), Query Frame = 1

Query: 115  KFVVRASDASITKEIEVDPQGWLDDITDGGVEYMPEEEVKVAAAERLKISMERIALLKAA 174
            KFVVRAS+ASITK+IE D QGW DD+TDGGVEYMPE+EVK  AAE+LKISMERIALLKAA
Sbjct: 1029 KFVVRASEASITKQIESDIQGWCDDLTDGGVEYMPEDEVKATAAEKLKISMERIALLKAA 1088

Query: 175  QPPPKTPK 234
            Q P KT K
Sbjct: 1089 Q-PKKTSK 1095

Query: 235  294
            
Sbjct: 1149 1095

Query: 295  319
            
Sbjct: 1209 1095


HSP 2 Score: 57.4 bits (137), Expect = 1.3e-07
Identity = 30/38 (78.95%), Postives = 32/38 (84.21%), Query Frame = 3

Query: 6    AAKTMVW-GVWLGMMIFGASEVSRNVDLGDETTTMLCK 65
            AAKT  W G ++GMMIFGASEVSRN+DLGDETTTM+CK
Sbjct: 994  AAKT--WHGGFVGMMIFGASEVSRNMDLGDETTTMMCK 1029

Query: 66   117
            
Sbjct: 1054 1029

BLAST of WMU41555 vs. NCBI nr
Match: gi|778679265|ref|XP_004147656.2| (PREDICTED: protein TPLATE [Cucumis sativus])

HSP 1 Score: 136.3 bits (342), Expect = 3.5e-29
Identity = 69/69 (100.00%), Postives = 69/69 (100.00%), Query Frame = 1

Query: 115  KFVVRASDASITKEIEVDPQGWLDDITDGGVEYMPEEEVKVAAAERLKISMERIALLKAA 174
            KFVVRASDASITKEIEVDPQGWLDDITDGGVEYMPEEEVKVAAAERLKISMERIALLKAA
Sbjct: 1027 KFVVRASDASITKEIEVDPQGWLDDITDGGVEYMPEEEVKVAAAERLKISMERIALLKAA 1086

Query: 175  QPPPKTPKS 234
            QPPPKTPKS
Sbjct: 1087 QPPPKTPKS 1095

Query: 235  294
            
Sbjct: 1147 1095

Query: 295  322
            
Sbjct: 1207 1095

BLAST of WMU41555 vs. NCBI nr
Match: gi|659077158|ref|XP_008439063.1| (PREDICTED: protein TPLATE [Cucumis melo])

HSP 1 Score: 134.8 bits (338), Expect = 1.0e-28
Identity = 68/69 (98.55%), Postives = 68/69 (98.55%), Query Frame = 1

Query: 115  KFVVRASDASITKEIEVDPQGWLDDITDGGVEYMPEEEVKVAAAERLKISMERIALLKAA 174
            KFVVRASDASITKEIE DPQGWLDDITDGGVEYMPEEEVKVAAAERLKISMERIALLKAA
Sbjct: 1027 KFVVRASDASITKEIEADPQGWLDDITDGGVEYMPEEEVKVAAAERLKISMERIALLKAA 1086

Query: 175  QPPPKTPKS 234
            QPPPKTPKS
Sbjct: 1087 QPPPKTPKS 1095

Query: 235  294
            
Sbjct: 1147 1095

Query: 295  322
            
Sbjct: 1207 1095

BLAST of WMU41555 vs. NCBI nr
Match: gi|702464866|ref|XP_010029027.1| (PREDICTED: protein TPLATE [Eucalyptus grandis])

HSP 1 Score: 123.2 bits (308), Expect = 3.0e-25
Identity = 62/69 (89.86%), Postives = 66/69 (95.65%), Query Frame = 1

Query: 115  KFVVRASDASITKEIEVDPQGWLDDITDGGVEYMPEEEVKVAAAERLKISMERIALLKAA 174
            KFVVRASDASITK IE D QGWLDD+TDGGVEYMPE+EVKVAAAE+L+ISMERIALLKAA
Sbjct: 1029 KFVVRASDASITKVIESDLQGWLDDLTDGGVEYMPEDEVKVAAAEKLRISMERIALLKAA 1088

Query: 175  QPPPKTPKS 234
            QPPPKTPKS
Sbjct: 1089 QPPPKTPKS 1097

Query: 235  294
            
Sbjct: 1149 1097

Query: 295  322
            
Sbjct: 1209 1097

BLAST of WMU41555 vs. NCBI nr
Match: gi|802539411|ref|XP_012070910.1| (PREDICTED: protein TPLATE [Jatropha curcas])

HSP 1 Score: 122.5 bits (306), Expect = 5.2e-25
Identity = 61/69 (88.41%), Postives = 65/69 (94.20%), Query Frame = 1

Query: 115  KFVVRASDASITKEIEVDPQGWLDDITDGGVEYMPEEEVKVAAAERLKISMERIALLKAA 174
            KFVVRASD+SITKEIE D QGWLDD+TDGGVEYMPE+EVK AAAERL+ISMERIALLKAA
Sbjct: 1029 KFVVRASDSSITKEIEADLQGWLDDLTDGGVEYMPEDEVKEAAAERLRISMERIALLKAA 1088

Query: 175  QPPPKTPKS 234
            QPPPK PKS
Sbjct: 1089 QPPPKAPKS 1097

Query: 235  294
            
Sbjct: 1149 1097

Query: 295  322
            
Sbjct: 1209 1097

BLAST of WMU41555 vs. NCBI nr
Match: gi|296090248|emb|CBI40067.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 121.3 bits (303), Expect = 1.2e-24
Identity = 61/69 (88.41%), Postives = 64/69 (92.75%), Query Frame = 1

Query: 115  KFVVRASDASITKEIEVDPQGWLDDITDGGVEYMPEEEVKVAAAERLKISMERIALLKAA 174
            KFV+RASDASITKEI  D QGWLDD+TDGGVEYMPEEEVKVAA ERL+ISMERIALLKAA
Sbjct: 988  KFVIRASDASITKEIGSDLQGWLDDLTDGGVEYMPEEEVKVAAVERLRISMERIALLKAA 1047

Query: 175  QPPPKTPKS 234
            QPPPK PKS
Sbjct: 1048 QPPPKPPKS 1056

Query: 235  294
            
Sbjct: 1108 1056

Query: 295  322
            
Sbjct: 1168 1056

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
AT3G01780.11.4e-2380.88 ARM repeat superfamily protein[more]
Match NameE-valueIdentityDescription
TPLAT_ARATH2.4e-2280.88Protein TPLATE OS=Arabidopsis thaliana GN=TPLATE PE=1 SV=1[more]
Match NameE-valueIdentityDescription
gi|778679265|ref|XP_004147656.2|3.5e-29100.00PREDICTED: protein TPLATE [Cucumis sativus][more]
gi|659077158|ref|XP_008439063.1|1.0e-2898.55PREDICTED: protein TPLATE [Cucumis melo][more]
gi|702464866|ref|XP_010029027.1|3.0e-2589.86PREDICTED: protein TPLATE [Eucalyptus grandis][more]
gi|802539411|ref|XP_012070910.1|5.2e-2588.41PREDICTED: protein TPLATE [Jatropha curcas][more]
gi|296090248|emb|CBI40067.3|1.2e-2488.41unnamed protein product [Vitis vinifera][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla021869Cla021869gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0106847S1_0106847EST
S3_0120496S3_0120496EST
S3_0165888S3_0165888EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36029FAMILY NOT NAMEDcoord: 9..92
score: 1.5