WMU39481 (transcribed_cluster) Watermelon (97103) v1

NameWMU39481
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr7 : 29848335 .. 29848561 (+)
Sequence length477
The following sequences are available for this feature:

transcribed_cluster sequence

AACAGCGATAAGTTAATAACATTGATTTACCAAAACAAACTCTAAAAAAATAAATCTCTTCGTTGTTCATCGTCGAAAATGTCGTGCTGTGGTGGAAACTGTGGATGCGGGCTCTGGCTGCAAGTGCGGAAATGGCTGTGGAGGATGCAAGATGTTCCCTGACATGAGCTTTTTCAGAGGCCACCGCTACCATCGAGACCTTCGTAGTCGGTTTTCGCTCCTCACAAGATGTCTTTTCGAGGTAGCAGAGATGTAGAGTCCCATATCATAGACTGATCAGCCTCCCAAGCCATGATTTTCTCCTGCACTACATTGAACCTACTCTCAATCTCTTCAACATCCCCAAACTCTGTCTCTTCAATTTTGAACTTCTTCGATTACATCAGTTTGATGATTCTGTGTGGTTACTAAACATAACTTCGAACTAAAGTATCAGCCAAAACCTTCTTTCCATCAATCTGAAAGGCTTATGTTCGA
BLAST of WMU39481 vs. TrEMBL
Match: A0A0A0KXV3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G101790 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 5.0e-11
Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = -2

Query: 246 DGKKVLADTLVRSYV**PHRIIKLM*SKKFK-------IEETEFGDVEEIESRFNVVQEK 305
           DGKKVLAD   +         + L+ ++ ++       IEE   GDVEE+ESRFNVVQEK
Sbjct: 37  DGKKVLADLCSK---------LSLVSTQNYETDVVEVEIEERGVGDVEEVESRFNVVQEK 96

Query: 306 IMAWEADQSMIWDSTSL 365
           IMAWEADQSMIWDST+L
Sbjct: 97  IMAWEADQSMIWDSTTL 104

Query: 366 425
           
Sbjct: 157 104

Query: 426 456
           
Sbjct: 217 104

BLAST of WMU39481 vs. NCBI nr
Match: gi|778691866|ref|XP_011653366.1| (PREDICTED: exocyst complex component EXO70B1 [Cucumis sativus])

HSP 1 Score: 78.2 bits (191), Expect = 1.5e-11
Identity = 43/77 (55.84%), Postives = 52/77 (67.53%), Query Frame = -2

Query: 246 DGKKVLADTLVRSYV**PHRIIKLM*SKKFK-------IEETEFGDVEEIESRFNVVQEK 305
           DGKKVLAD   +         + L+ ++ ++       IEE   GDVEE+ESRFNVVQEK
Sbjct: 37  DGKKVLADLCSK---------LSLVSTQNYETDVVEVEIEERGVGDVEEVESRFNVVQEK 96

Query: 306 IMAWEADQSMIWDSTSL 365
           IMAWEADQSMIWDST+L
Sbjct: 97  IMAWEADQSMIWDSTTL 104

Query: 366 425
           
Sbjct: 157 104

Query: 426 456
           
Sbjct: 217 104

BLAST of WMU39481 vs. NCBI nr
Match: gi|659125941|ref|XP_008462929.1| (PREDICTED: exocyst complex component EXO70B1 [Cucumis melo])

HSP 1 Score: 74.3 bits (181), Expect = 2.1e-10
Identity = 42/77 (54.55%), Postives = 50/77 (64.94%), Query Frame = -2

Query: 246 DGKKVLADTLVRSYV**PHRIIKLM*SKKFK-------IEETEFGDVEEIESRFNVVQEK 305
           DGKKVLAD   +         + L+ ++ ++       I E   GDVEEIES FNVVQEK
Sbjct: 37  DGKKVLADLCSK---------LSLVTTQNYETDVVEVEINERGVGDVEEIESSFNVVQEK 96

Query: 306 IMAWEADQSMIWDSTSL 365
           IMAWEADQSMIWDST+L
Sbjct: 97  IMAWEADQSMIWDSTTL 104

Query: 366 425
           
Sbjct: 157 104

Query: 426 456
           
Sbjct: 217 104

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KXV3_CUCSA5.0e-1155.84Uncharacterized protein OS=Cucumis sativus GN=Csa_4G101790 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|778691866|ref|XP_011653366.1|1.5e-1155.84PREDICTED: exocyst complex component EXO70B1 [Cucumis sativus][more]
gi|659125941|ref|XP_008462929.1|2.1e-1054.55PREDICTED: exocyst complex component EXO70B1 [Cucumis melo][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla010782Cla010782gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0156624S2_0156624EST
S4_0094600S4_0094600EST