WMU36946 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU36946
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionATP-dependent Clp protease proteolytic subunit
LocationChr5 : 11641242 .. 11642908 (+)
Sequence length1115
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

TGCAAGGCTGATGTTTTCAACTGTTTGTCTGGGACTGGCTGCATCCATGGGGAGCATTTTCTTCTAGCTTCTGTTCCAAGGGGAAAGCGATTCTGCATGCCCAATGGAAGAGTGATGATCCATCAACCTCTTGGAACAGCTGGAGGAAAAGCAACTGAGATGAGCATACGGATACGAGAAATGGCATATCACAAGATTAAGCTAAACAAAATTTTTTCTAGAATAACAGGAAAGCCACTACAGCAGATTGAATTCGACACAGATCGTGATAATTTTATGAATCCTTGGGAAGCTAAGGAATATGGTTTGATCGATGAAGTTATTGATGATGGGAAGCCTGGACTTGTTGCTCCAATTGCAGAGGCAACTCCTCCACCGAAAACCCCGAGTTTGGGATCTATGGAAGGTTGAAGGTAGTCGGAAAGCCAAAAAGAATTTGCCTTCAGAAAACAAGATTTTGCAGAATGGATATCAAGGGGGTCAAGGAAGTGACGAGGAGCGTGGTAGCCAGCAGGAAACAGAAAACCGAGTCCTGTATGACACAAGACTTCACCCGTTCCTCTTCTTCCTACATCCTTCTGCCTCTATGGTTGTATCCTAGCTTGTTCTTTCCATTCTCAAATAGCTCTTTCTCTGTAAGATATTAAAGGTGATTATTTACCAATCAGTTGAACAAGTATAGGTTTTGGAAAATTCAAGAGTCCTTCTCTCCCCTTGTCTAGATGCTAAAGTATTGCTCGAGTTGATATTGAATCTGTCTCGAAACCTCGGCTCAAATGTGCAACGGACCACCAATGCTCATGATTCTGAGTAAGTTGCTGCAAACTTGAATGGAAAGTTTCTATGAGTTTTGTAGGTCTCTCTGGTAGGTTGAGATTTTGATTAAGATGGAAGGCAGGTGATAATGTTTGAATTCAAGATAGTCATGCAATGCATTGCTAAATAGGAAGTGTTTTTACCTCTTGTGTGGAAGATTAGGATGCTGCTGTCGCATGTTATAACTTACAGTTGGAGTTCAGTATTGAGGCTATTTGATGCATATACACTCTGAGATGGCATTACCATCAATATATTTCTAAGAAAGAGAAAAAATTAATAATAATAAATTTTTAAGT
Homology
[Close]
BLAST of WMU36946 vs. TAIR10
Match: AT1G66670.1 (AT1G66670.1 CLP protease proteolytic subunit 3)

HSP 1 Score: 202.6 bits (514), Expect = 4.2e-52
Identity = 99/128 (77.34%), Postives = 104/128 (81.25%), Query Frame = 1 

Query: 1   CKADVFNCLSGTGCIHGEHFLLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE 60
           CKADV     G     G  FLLAS  +GKR+CMPN +VMIHQPLGTAGGKATEMSIRIRE
Sbjct: 150 CKADVSTVCLGLAASMGA-FLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIRE 209

Query: 61  MAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIA 120
           M YHKIKLNKIFSRITGKP  +IE DTDRDNF+NPWEAKEYGLID VIDDGKPGL+API 
Sbjct: 210 MMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLIAPIG 269

Query: 121 EATPPPKT 180
           + TPPPKT
Sbjct: 270 DGTPPPKT 276

Query: 181  240
           
Sbjct: 330  276

Query: 241  300
           
Sbjct: 390  276

Query: 301  360
           
Sbjct: 450  276

Query: 361  385
           
Sbjct: 510  276


HSP 2 Score: 49.7 bits (117), Expect = 4.6e-06
Identity = 20/31 (64.52%), Postives = 22/31 (70.97%), Query Frame = 2 

Query: 380 KPRVWDLWKVEGSRKAKKNLPSENKILQNGY 439
           K +VWDLWKVEG++K   NLPSE  + QNGY
Sbjct: 275 KTKVWDLWKVEGTKKDNTNLPSERSMTQNGY 305

Query: 440  473
           
Sbjct: 335  305

[Close]
BLAST of WMU36946 vs. TAIR10
Match: AT1G02560.1 (AT1G02560.1 nuclear encoded CLP protease 5)

HSP 1 Score: 96.7 bits (239), Expect = 3.3e-20
Identity = 48/89 (53.93%), Postives = 61/89 (68.54%), Query Frame = 1 

Query: 58  FLLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKP 117
           FLL++  +GKR+ +PN R+MIHQPLG A G  T++ I+  EM +HK  LN   +  TG+ 
Sbjct: 197 FLLSAGTKGKRYSLPNSRIMIHQPLGGAQGGQTDIDIQANEMLHHKANLNGYLAYHTGQS 256

Query: 118 LQQIEFDTDRDNFMNPWEAKEYGLIDEVI 177
           L++I  DTDRD FM+  EAKEYGLID VI
Sbjct: 257 LEKINQDTDRDFFMSAKEAKEYGLIDGVI 285

Query: 178  237
           
Sbjct: 317  285

Query: 238  297
           
Sbjct: 377  285

Query: 298  325
           
Sbjct: 437  285

[Close]
BLAST of WMU36946 vs. TAIR10
Match: AT5G45390.1 (AT5G45390.1 CLP protease P4)

HSP 1 Score: 90.9 bits (224), Expect = 1.8e-18
Identity = 44/105 (41.90%), Postives = 64/105 (60.95%), Query Frame = 1 

Query: 61  LLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL 120
           +L +  +GKRF MPN R+MIHQPLG A G+A ++ I+ +E+ ++K  +  I +  T +  
Sbjct: 163 ILGAGTKGKRFAMPNTRIMIHQPLGGASGQAIDVEIQAKEVMHNKNNVTSIIAGCTSRSF 222

Query: 121 QQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIAEATPP 180
           +Q+  D DRD +M+P EA EYGLID VID      + P+ +   P
Sbjct: 223 EQVLKDIDRDRYMSPIEAVEYGLIDGVIDGDSIIPLEPVPDRVKP 267

Query: 181  240
           
Sbjct: 283  267

Query: 241  300
           
Sbjct: 343  267

Query: 301  360
           
Sbjct: 403  267

Query: 361  376
           
Sbjct: 463  267

[Close]
BLAST of WMU36946 vs. TAIR10
Match: AT5G23140.1 (AT5G23140.1 nuclear-encoded CLP protease P7)

HSP 1 Score: 80.5 bits (197), Expect = 2.4e-15
Identity = 39/90 (43.33%), Postives = 59/90 (65.56%), Query Frame = 1 

Query: 61  LLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL 120
           LLA+  +G+R  +PN  VMIHQP G   G+A +++I  +++      LN+++ + TG+PL
Sbjct: 132 LLAAGAKGQRRSLPNATVMIHQPSGGYSGQAKDITIHTKQIVRVWDALNELYVKHTGQPL 191

Query: 121 QQIEFDTDRDNFMNPWEAKEYGLIDEVIDD 180
             +  + DRD+FM P EAK +G+IDEVID+
Sbjct: 192 DVVANNMDRDHFMTPEEAKAFGIIDEVIDE 221

Query: 181  240
           
Sbjct: 252  221

Query: 241  300
           
Sbjct: 312  221

Query: 301  331
           
Sbjct: 372  221

[Close]
BLAST of WMU36946 vs. TAIR10
Match: AT1G11750.2 (AT1G11750.2 CLP protease proteolytic subunit 6)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-13
Identity = 34/89 (38.20%), Postives = 57/89 (64.04%), Query Frame = 1 

Query: 61  LLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREMAYHKIKLNKIFSRITGKPL 120
           LLA   +G R+ MPN RVMIHQP    GG   ++  ++ E    + K++++++  TG+PL
Sbjct: 198 LLAGGEKGMRYAMPNTRVMIHQPQTGCGGHVEDVRRQVNEAIEARQKIDRMYAAFTGQPL 257

Query: 121 QQIEFDTDRDNFMNPWEAKEYGLIDEVID 180
           ++++  T+RD F++  EA E+GLID +++
Sbjct: 258 EKVQQYTERDRFLSASEALEFGLIDGLLE 286

Query: 181  240
           
Sbjct: 318  286

Query: 241  300
           
Sbjct: 378  286

Query: 301  328
           
Sbjct: 438  286

[Close]
BLAST of WMU36946 vs. Swiss-Prot
Match: CLPP3_ARATH (ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis thaliana GN=CLPP3 PE=1 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 7.5e-51
Identity = 99/128 (77.34%), Postives = 104/128 (81.25%), Query Frame = 1 

Query: 1   CKADVFNCLSGTGCIHGEHFLLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE 60
           CKADV     G     G  FLLAS  +GKR+CMPN +VMIHQPLGTAGGKATEMSIRIRE
Sbjct: 150 CKADVSTVCLGLAASMGA-FLLASGSKGKRYCMPNSKVMIHQPLGTAGGKATEMSIRIRE 209

Query: 61  MAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIA 120
           M YHKIKLNKIFSRITGKP  +IE DTDRDNF+NPWEAKEYGLID VIDDGKPGL+API 
Sbjct: 210 MMYHKIKLNKIFSRITGKPESEIESDTDRDNFLNPWEAKEYGLIDAVIDDGKPGLIAPIG 269

Query: 121 EATPPPKT 180
           + TPPPKT
Sbjct: 270 DGTPPPKT 276

Query: 181  240
           
Sbjct: 330  276

Query: 241  300
           
Sbjct: 390  276

Query: 301  360
           
Sbjct: 450  276

Query: 361  385
           
Sbjct: 510  276


HSP 2 Score: 49.7 bits (117), Expect = 8.1e-05
Identity = 20/31 (64.52%), Postives = 22/31 (70.97%), Query Frame = 2 

Query: 380 KPRVWDLWKVEGSRKAKKNLPSENKILQNGY 439
           K +VWDLWKVEG++K   NLPSE  + QNGY
Sbjct: 275 KTKVWDLWKVEGTKKDNTNLPSERSMTQNGY 305

Query: 440  473
           
Sbjct: 335  305

[Close]
BLAST of WMU36946 vs. Swiss-Prot
Match: CLPP_MARMS (ATP-dependent Clp protease proteolytic subunit OS=Marinomonas sp. (strain MWYL1) GN=clpP PE=3 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-22
Identity = 56/107 (52.34%), Postives = 69/107 (64.49%), Query Frame = 1 

Query: 4   KADVFNCLSGTGCIHGEHFLLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREM 63
           K DV     G     G   LL +   GKR+C+PN RVMIHQPLG   G+A+++ I  RE+
Sbjct: 100 KPDVSTMCIGQAASMGA-LLLTAGAAGKRYCLPNSRVMIHQPLGGYQGQASDIEIHTREI 159

Query: 64  AYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVI 123
              K KLN+I S  TGKP++Q+  DTDRDNFMNP  AK+YGLIDE++
Sbjct: 160 LSIKHKLNEIISFHTGKPIEQVALDTDRDNFMNPQTAKDYGLIDEIL 205

Query: 124  183
           
Sbjct: 220  205

Query: 184  243
           
Sbjct: 280  205

Query: 244  303
           
Sbjct: 340  205

Query: 304  325
           
Sbjct: 400  205

[Close]
BLAST of WMU36946 vs. Swiss-Prot
Match: CLPP_RALSO (ATP-dependent Clp protease proteolytic subunit OS=Ralstonia solanacearum (strain GMI1000) GN=clpP PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.3e-22
Identity = 54/107 (50.47%), Postives = 74/107 (69.16%), Query Frame = 1 

Query: 4   KADVFNCLSGTGCIHGEHFLLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREM 63
           K DV     G     G  FLLA+  +GKR+ +PN R+MIHQPLG A G+A+++ I+ RE+
Sbjct: 107 KPDVSTLCMGMAASMGA-FLLAAGAKGKRYALPNSRIMIHQPLGGARGQASDIEIQAREI 166

Query: 64  AYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVI 123
            Y + +LN I S +TG+P+ +I  DTDRDNFM+  +AKEYGLID+V+
Sbjct: 167 LYLRERLNTILSEVTGQPVDKIARDTDRDNFMSGDQAKEYGLIDKVL 212

Query: 124  183
           
Sbjct: 227  212

Query: 184  243
           
Sbjct: 287  212

Query: 244  303
           
Sbjct: 347  212

Query: 304  325
           
Sbjct: 407  212

[Close]
BLAST of WMU36946 vs. Swiss-Prot
Match: CLPP_CLOBK (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Okra / Type B1) GN=clpP PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.3e-22
Identity = 58/111 (52.25%), Postives = 70/111 (63.06%), Query Frame = 1 

Query: 4   KADVFNCLSGTGCIHGEHFLLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREM 63
           K DV     G     G  FLLA+  +GKR+ +PN  VMIHQPLG   G+AT++ I    +
Sbjct: 85  KPDVSTICVGMAASMGA-FLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGIHAERI 144

Query: 64  AYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGK 123
              K KLN I S  TGKPL+Q+E DT+RD+F++  EAKEYGLIDEVID  K
Sbjct: 145 LKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYGLIDEVIDKKK 194

Query: 124  183
           
Sbjct: 205  194

Query: 184  243
           
Sbjct: 265  194

Query: 244  303
           
Sbjct: 325  194

Query: 304  337
           
Sbjct: 385  194

[Close]
BLAST of WMU36946 vs. Swiss-Prot
Match: CLPP_CLOBJ (ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain Kyoto / Type A2) GN=clpP PE=3 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.3e-22
Identity = 58/111 (52.25%), Postives = 70/111 (63.06%), Query Frame = 1 

Query: 4   KADVFNCLSGTGCIHGEHFLLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIREM 63
           K DV     G     G  FLLA+  +GKR+ +PN  VMIHQPLG   G+AT++ I    +
Sbjct: 85  KPDVSTICVGMAASMGA-FLLAAGAKGKRYALPNSEVMIHQPLGGFRGQATDIGIHAERI 144

Query: 64  AYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGK 123
              K KLN I S  TGKPL+Q+E DT+RD+F++  EAKEYGLIDEVID  K
Sbjct: 145 LKMKKKLNTILSDRTGKPLEQVELDTERDHFLSAEEAKEYGLIDEVIDKKK 194

Query: 124  183
           
Sbjct: 205  194

Query: 184  243
           
Sbjct: 265  194

Query: 244  303
           
Sbjct: 325  194

Query: 304  337
           
Sbjct: 385  194

[Close]
BLAST of WMU36946 vs. TrEMBL
Match: A0A0A0LA84_CUCSA (ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_3G363170 PE=3 SV=1)

HSP 1 Score: 223.4 bits (568), Expect = 4.6e-55
Identity = 124/183 (67.76%), Postives = 135/183 (73.77%), Query Frame = 1 

Query: 1   CKADVFNCLSGTGCIHGEHFLLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE 60
           CKADV     G     G  FLLAS  +GKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE
Sbjct: 161 CKADVSTVCLGLAASMGA-FLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE 220

Query: 61  MAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIA 120
           MAYHKIKLNKIFSRITGKP++QIE DT+RDNFMNPWEAKEYGLIDEVIDDGKPGL+APIA
Sbjct: 221 MAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA 280

Query: 121 EATPPPKTP--SLGSMEG*R*SESQ--KEFAFRKQDFAEWISRGSRK*RGAW*PAGNRKP 180
           EATPPPKT    L  +EG R ++     E    K  + E   +GS K RG        +P
Sbjct: 281 EATPPPKTRIWDLWKVEGSRKAKKNLPSESKILKNGYEEG-GQGSDKERGG--QQETEEP 339

Query: 181 SPV 240
           SPV
Sbjct: 341 SPV 339

Query: 241  300
           
Sbjct: 401  339

Query: 301  360
           
Sbjct: 461  339

Query: 361  420
           
Sbjct: 521  339

Query: 421  480
           
Sbjct: 581  339

Query: 481  538
           
Sbjct: 641  339

[Close]
BLAST of WMU36946 vs. TrEMBL
Match: W9R0I5_9ROSA (ATP-dependent Clp protease proteolytic subunit OS=Morus notabilis GN=L484_024001 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 6.8e-51
Identity = 102/128 (79.69%), Postives = 108/128 (84.38%), Query Frame = 1 

Query: 1   CKADVFNCLSGTGCIHGEHFLLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE 60
           CKADV     G     G  FLLAS  +GKRFCMPN RVMIHQPLGT+GGKATEMSIRIRE
Sbjct: 166 CKADVSTVCLGLAASMGA-FLLASGTKGKRFCMPNARVMIHQPLGTSGGKATEMSIRIRE 225

Query: 61  MAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIA 120
           M YHKIKLNKI SR+TGKPL+Q+E DTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAP A
Sbjct: 226 MVYHKIKLNKILSRVTGKPLEQVELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPTA 285

Query: 121 EATPPPKT 180
           +A PPPKT
Sbjct: 286 DAAPPPKT 292

Query: 181  240
           
Sbjct: 346  292

Query: 241  300
           
Sbjct: 406  292

Query: 301  360
           
Sbjct: 466  292

Query: 361  385
           
Sbjct: 526  292

[Close]
BLAST of WMU36946 vs. TrEMBL
Match: W9R0I5_9ROSA (ATP-dependent Clp protease proteolytic subunit OS=Morus notabilis GN=L484_024001 PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 4.2e-08
Identity = 30/43 (69.77%), Postives = 35/43 (81.40%), Query Frame = 2 

Query: 380 KPRVWDLWKVEGSRKAKKNLPSENKILQNGYQGGQGSDEERGS 439
           K +VWD+WKVEGSRKAKKNLPSE+KIL+NG +GGQ   E   S
Sbjct: 291 KTKVWDMWKVEGSRKAKKNLPSESKILENGSKGGQSEKETPAS 333

Query: 440  499
           
Sbjct: 351  333

Query: 500  509
           
Sbjct: 411  333


HSP 2 Score: 206.1 bits (523), Expect = 7.6e-50
Identity = 99/128 (77.34%), Postives = 110/128 (85.94%), Query Frame = 1 

Query: 1   CKADVFNCLSGTGCIHGEHFLLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE 60
           CKADV     G     G  FLL++  +GKRFCMPNGRVMIHQPLGTAGGKA+EMSIRIRE
Sbjct: 163 CKADVSTICLGLAASMGA-FLLSAGSKGKRFCMPNGRVMIHQPLGTAGGKASEMSIRIRE 222

Query: 61  MAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIA 120
           M+YHKIKLNKI SRITGKPL+Q+E DTDRDNFMN WEAKEYGL+DEVIDDGKPGLVAP+ 
Sbjct: 223 MSYHKIKLNKILSRITGKPLEQVEVDTDRDNFMNAWEAKEYGLVDEVIDDGKPGLVAPLT 282

Query: 121 EATPPPKT 180
           +A+PPPKT
Sbjct: 283 DASPPPKT 289

Query: 181  240
           
Sbjct: 343  289

Query: 241  300
           
Sbjct: 403  289

Query: 301  360
           
Sbjct: 463  289

Query: 361  385
           
Sbjct: 523  289

[Close]
BLAST of WMU36946 vs. TrEMBL
Match: B9H362_POPTR (ATP-dependent Clp protease proteolytic subunit OS=Populus trichocarpa GN=POPTR_0004s09110g PE=3 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 1.4e-08
Identity = 32/48 (66.67%), Postives = 38/48 (79.17%), Query Frame = 2 

Query: 380 KPRVWDLWKVEGSRKAKKNLPSENKILQNGYQGGQGSDEERGSQQETE 439
           K RVWDLWK+EGS+KAK NLPSE+K+LQNGY G  G D +RG  +E E
Sbjct: 288 KTRVWDLWKIEGSKKAKNNLPSEHKMLQNGYVG--GGDGDRGVDREKE 333

Query: 440  499
           
Sbjct: 348  333

Query: 500  524
           
Sbjct: 408  333


HSP 2 Score: 205.7 bits (522), Expect = 9.9e-50
Identity = 101/128 (78.91%), Postives = 107/128 (83.59%), Query Frame = 1 

Query: 1   CKADVFNCLSGTGCIHGEHFLLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE 60
           CKADV     G     G  FLLA+  +GKRFCMPN RVMIHQPLGTAGGKATEMSIRIRE
Sbjct: 171 CKADVSTICLGLAASMGA-FLLATGTKGKRFCMPNSRVMIHQPLGTAGGKATEMSIRIRE 230

Query: 61  MAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIA 120
           M YHK+KLNKI SR+TGKP +QIE DTDRDNFMNPWEAKEYGLID VIDDGKPGLVAPIA
Sbjct: 231 MVYHKVKLNKILSRVTGKPEEQIEVDTDRDNFMNPWEAKEYGLIDGVIDDGKPGLVAPIA 290

Query: 121 EATPPPKT 180
           +A PPPKT
Sbjct: 291 DAAPPPKT 297

Query: 181  240
           
Sbjct: 351  297

Query: 241  300
           
Sbjct: 411  297

Query: 301  360
           
Sbjct: 471  297

Query: 361  385
           
Sbjct: 531  297

[Close]
BLAST of WMU36946 vs. TrEMBL
Match: A0A0D2PWK4_GOSRA (ATP-dependent Clp protease proteolytic subunit (Fragment) OS=Gossypium raimondii GN=B456_001G085800 PE=3 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 7.2e-08
Identity = 29/39 (74.36%), Postives = 34/39 (87.18%), Query Frame = 2 

Query: 380 KPRVWDLWKVEGSRKAKKNLPSENKILQNGYQGGQGSDE 439
           K RVWDLWKVEGS+KAKKNLP+E+K+LQNG+ GGQ   E
Sbjct: 296 KTRVWDLWKVEGSKKAKKNLPTEHKMLQNGHTGGQEKKE 334

Query: 440  497
           
Sbjct: 356  334


HSP 2 Score: 205.7 bits (522), Expect = 9.9e-50
Identity = 101/128 (78.91%), Postives = 107/128 (83.59%), Query Frame = 1 

Query: 1   CKADVFNCLSGTGCIHGEHFLLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE 60
           CKADV     G     G  FLLA+  +GKRFCMPN RVMIHQPLGTAGGKATEMSIRIRE
Sbjct: 139 CKADVSTICLGLAASMGA-FLLATGTKGKRFCMPNSRVMIHQPLGTAGGKATEMSIRIRE 198

Query: 61  MAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIA 120
           M YHK+KLNKI SR+TGKP +QIE DTDRDNFMNPWEAKEYGLID VIDDGKPGLVAPIA
Sbjct: 199 MVYHKVKLNKILSRVTGKPEEQIEVDTDRDNFMNPWEAKEYGLIDGVIDDGKPGLVAPIA 258

Query: 121 EATPPPKT 180
           +A PPPKT
Sbjct: 259 DAAPPPKT 265

Query: 181  240
           
Sbjct: 319  265

Query: 241  300
           
Sbjct: 379  265

Query: 301  360
           
Sbjct: 439  265

Query: 361  385
           
Sbjct: 499  265

[Close]
BLAST of WMU36946 vs. NCBI nr
Match: gi|778680955|ref|XP_011651427.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis sativus])

HSP 1 Score: 227.3 bits (578), Expect = 4.5e-56
Identity = 124/183 (67.76%), Postives = 135/183 (73.77%), Query Frame = 1 

Query: 1   CKADVFNCLSGTGCIHGEHFLLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE 60
           CKADV     G     G  FLLAS  +GKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE
Sbjct: 161 CKADVSTVCLGLAASMGA-FLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE 220

Query: 61  MAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIA 120
           MAYHKIKLNKIFSRITGKP++QIE DT+RDNFMNPWEAKEYGLIDEVIDDGKPGL+APIA
Sbjct: 221 MAYHKIKLNKIFSRITGKPIEQIELDTERDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA 280

Query: 121 EATPPPKTP--SLGSMEG*R*SESQ--KEFAFRKQDFAEWISRGSRK*RGAW*PAGNRKP 180
           EATPPPKT    L  +EG R ++     E    K  + E   +GS K RG        +P
Sbjct: 281 EATPPPKTRIWDLWKVEGSRKAKKNLPSESKILKNGYEEG-GQGSDKERGG--QQETEEP 339

Query: 181 SPV 240
           SPV
Sbjct: 341 SPV 339

Query: 241  300
           
Sbjct: 401  339

Query: 301  360
           
Sbjct: 461  339

Query: 361  420
           
Sbjct: 521  339

Query: 421  480
           
Sbjct: 581  339

Query: 481  538
           
Sbjct: 641  339

[Close]
BLAST of WMU36946 vs. NCBI nr
Match: gi|659114541|ref|XP_008457103.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucumis melo])

HSP 1 Score: 225.3 bits (573), Expect = 1.7e-55
Identity = 110/128 (85.94%), Postives = 113/128 (88.28%), Query Frame = 1 

Query: 1   CKADVFNCLSGTGCIHGEHFLLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE 60
           CKADV     G     G  FLLAS  +GKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE
Sbjct: 162 CKADVSTICLGLAASMGA-FLLASGSKGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE 221

Query: 61  MAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIA 120
           MAYHKIKLNKIFSRITGKPL+QIE DTDRDNFMNPWEAKEYGLIDEVIDDGKPGL+APIA
Sbjct: 222 MAYHKIKLNKIFSRITGKPLEQIELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLIAPIA 281

Query: 121 EATPPPKT 180
           EATPPPKT
Sbjct: 282 EATPPPKT 288

Query: 181  240
           
Sbjct: 342  288

Query: 241  300
           
Sbjct: 402  288

Query: 301  360
           
Sbjct: 462  288

Query: 361  385
           
Sbjct: 522  288

[Close]
BLAST of WMU36946 vs. NCBI nr
Match: gi|703097047|ref|XP_010096010.1| (ATP-dependent Clp protease proteolytic subunit 3 [Morus notabilis])

HSP 1 Score: 212.6 bits (540), Expect = 1.2e-51
Identity = 102/128 (79.69%), Postives = 108/128 (84.38%), Query Frame = 1 

Query: 1   CKADVFNCLSGTGCIHGEHFLLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE 60
           CKADV     G     G  FLLAS  +GKRFCMPN RVMIHQPLGT+GGKATEMSIRIRE
Sbjct: 166 CKADVSTVCLGLAASMGA-FLLASGTKGKRFCMPNARVMIHQPLGTSGGKATEMSIRIRE 225

Query: 61  MAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIA 120
           M YHKIKLNKI SR+TGKPL+Q+E DTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAP A
Sbjct: 226 MVYHKIKLNKILSRVTGKPLEQVELDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPTA 285

Query: 121 EATPPPKT 180
           +A PPPKT
Sbjct: 286 DAAPPPKT 292

Query: 181  240
           
Sbjct: 346  292

Query: 241  300
           
Sbjct: 406  292

Query: 301  360
           
Sbjct: 466  292

Query: 361  385
           
Sbjct: 526  292

[Close]
BLAST of WMU36946 vs. NCBI nr
Match: gi|356499630|ref|XP_003518640.1| (PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Glycine max])

HSP 1 Score: 209.5 bits (532), Expect = 9.8e-51
Identity = 108/163 (66.26%), Postives = 122/163 (74.85%), Query Frame = 1 

Query: 1   CKADVFNCLSGTGCIHGEHFLLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE 60
           CKADV     G     G  F+LAS  +GKR+CMPN RVMIHQPLGTAGGKATEMSIRIRE
Sbjct: 145 CKADVSTVCLGLAASMGA-FILASGTKGKRYCMPNSRVMIHQPLGTAGGKATEMSIRIRE 204

Query: 61  MAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIA 120
           MAYHKIK+NKI SRITGKP +QIE DTDRDNFMNPWEAKEYGL+D VIDDGKPGLVAPI 
Sbjct: 205 MAYHKIKINKILSRITGKPEEQIELDTDRDNFMNPWEAKEYGLVDGVIDDGKPGLVAPIG 264

Query: 121 EATPPPKTP--SLGSMEG*R*SESQKEFAFRKQDFAEWISRGS 180
           +++PPPKT    L  +EG   S   K+    +  F +  S+GS
Sbjct: 265 DSSPPPKTRVWDLWKIEG---SRKAKKNLPSEHKFLQNASKGS 303

Query: 181  240
           
Sbjct: 325  303

Query: 241  300
           
Sbjct: 385  303

Query: 301  360
           
Sbjct: 445  303

Query: 361  420
           
Sbjct: 505  303

Query: 421  480
           
Sbjct: 565  303

Query: 481  484
           
Sbjct: 625  303

[Close]
BLAST of WMU36946 vs. NCBI nr
Match: gi|224079413|ref|XP_002305856.1| (hypothetical protein POPTR_0004s09110g [Populus trichocarpa])

HSP 1 Score: 209.1 bits (531), Expect = 1.3e-50
Identity = 99/128 (77.34%), Postives = 110/128 (85.94%), Query Frame = 1 

Query: 1   CKADVFNCLSGTGCIHGEHFLLASVPRGKRFCMPNGRVMIHQPLGTAGGKATEMSIRIRE 60
           CKADV     G     G  FLL++  +GKRFCMPNGRVMIHQPLGTAGGKA+EMSIRIRE
Sbjct: 163 CKADVSTICLGLAASMGA-FLLSAGSKGKRFCMPNGRVMIHQPLGTAGGKASEMSIRIRE 222

Query: 61  MAYHKIKLNKIFSRITGKPLQQIEFDTDRDNFMNPWEAKEYGLIDEVIDDGKPGLVAPIA 120
           M+YHKIKLNKI SRITGKPL+Q+E DTDRDNFMN WEAKEYGL+DEVIDDGKPGLVAP+ 
Sbjct: 223 MSYHKIKLNKILSRITGKPLEQVEVDTDRDNFMNAWEAKEYGLVDEVIDDGKPGLVAPLT 282

Query: 121 EATPPPKT 180
           +A+PPPKT
Sbjct: 283 DASPPPKT 289

Query: 181  240
           
Sbjct: 343  289

Query: 241  300
           
Sbjct: 403  289

Query: 301  360
           
Sbjct: 463  289

Query: 361  385
           
Sbjct: 523  289

The following BLAST results are available for this feature:
BLAST of WMU36946 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G66670.14.2e-5277.34 CLP protease proteolytic subunit 3[more]
AT1G02560.13.3e-2053.93 nuclear encoded CLP protease 5[more]
AT5G45390.11.8e-1841.90 CLP protease P4[more]
AT5G23140.12.4e-1543.33 nuclear-encoded CLP protease P7[more]
AT1G11750.21.3e-1338.20 CLP protease proteolytic subunit 6[more]
BLAST of WMU36946 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CLPP3_ARATH7.5e-5177.34ATP-dependent Clp protease proteolytic subunit 3, chloroplastic OS=Arabidopsis t... [more]
CLPP_MARMS1.1e-2252.34ATP-dependent Clp protease proteolytic subunit OS=Marinomonas sp. (strain MWYL1)... [more]
CLPP_RALSO4.3e-2250.47ATP-dependent Clp protease proteolytic subunit OS=Ralstonia solanacearum (strain... [more]
CLPP_CLOBK4.3e-2252.25ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain ... [more]
CLPP_CLOBJ4.3e-2252.25ATP-dependent Clp protease proteolytic subunit OS=Clostridium botulinum (strain ... [more]
BLAST of WMU36946 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LA84_CUCSA4.6e-5567.76ATP-dependent Clp protease proteolytic subunit OS=Cucumis sativus GN=Csa_3G36317... [more]
W9R0I5_9ROSA6.8e-5179.69ATP-dependent Clp protease proteolytic subunit OS=Morus notabilis GN=L484_024001... [more]
W9R0I5_9ROSA4.2e-0869.77ATP-dependent Clp protease proteolytic subunit OS=Morus notabilis GN=L484_024001... [more]
B9H362_POPTR1.4e-0866.67ATP-dependent Clp protease proteolytic subunit OS=Populus trichocarpa GN=POPTR_0... [more]
A0A0D2PWK4_GOSRA7.2e-0874.36ATP-dependent Clp protease proteolytic subunit (Fragment) OS=Gossypium raimondii... [more]
BLAST of WMU36946 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778680955|ref|XP_011651427.1|4.5e-5667.76PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucu... [more]
gi|659114541|ref|XP_008457103.1|1.7e-5585.94PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Cucu... [more]
gi|703097047|ref|XP_010096010.1|1.2e-5179.69ATP-dependent Clp protease proteolytic subunit 3 [Morus notabilis][more]
gi|356499630|ref|XP_003518640.1|9.8e-5166.26PREDICTED: ATP-dependent Clp protease proteolytic subunit 3, chloroplastic [Glyc... [more]
gi|224079413|ref|XP_002305856.1|1.3e-5077.34hypothetical protein POPTR_0004s09110g [Populus trichocarpa][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR001907ClpP
IPR023562ClpP/TepA
Vocabulary: Molecular Function
TermDefinition
GO:0004252serine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0006508proteolysis
GO Annotation
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006508 proteolysis
molecular_function GO:0004252 serine-type endopeptidase activity
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla013153Cla013153gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0061337S1_0061337EST
S1_0072278S1_0072278EST
S1_0083455S1_0083455EST
S1_0090249S1_0090249EST
S1_0095818S1_0095818EST
S1_0104685S1_0104685EST
S1_0109517S1_0109517EST
S1_0122193S1_0122193EST
S1_0151701S1_0151701EST
S2_0113760S2_0113760EST
S2_0184104S2_0184104EST
S3_0030737S3_0030737EST
S4_0099004S4_0099004EST
S4_0103793S4_0103793EST
S4_0129280S4_0129280EST


InterPro
Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001907ATP-dependent Clp protease proteolytic subunitPRINTSPR00127CLPPROTEASEPcoord: 29..48
score: 1.3E-14coord: 86..105
score: 1.3
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPANTHERPTHR10381ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNITcoord: 20..166
score: 7.3
IPR023562Clp protease proteolytic subunit /Translocation-enhancing protein TepAPFAMPF00574CLP_proteasecoord: 2..109
score: 3.6
NoneNo IPR availablePANTHERPTHR10381:SF20ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT 3, CHLOROPLASTICcoord: 20..166
score: 7.3