WMU36714 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU36714
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	F7O18.3 protein
Location	Chr6 : 14950707 .. 14951550 (+)
Sequence length	631

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

ATTGAGGAAGCTGAAGTACTTAGAGGCCATTGTAAGAGAGCACTGATGATGAACATCAGCAAAAGAAGAATGCTGCTCCAACTGAAGAGAAAAACCAGGAAGAATCTGATCCATTTGGGCTTGATGCTTTTCTGCCTGGTTCGTTGAAGAAAAGTGAGAGGGAAAAGGTGTCAAACCGTCATTGATATCTTAGTGAAGCATGCCTTTGATAATGTTACGAGGTTCACATCGCAGCAACAGGATGCGATTGGGGAAATTGTGGGGCTTCAGTAAGGGAACAACAAAATCGTAGGAAACAAGGAAAATCAGTCTCGGGTAAACTTGATGTAAATGGATTTGAATGGCTGCAACAGAAATATGCCAATGAGAAGATCAGCATTCGGCATTCTGTTGGGGCTAGTGGCGATCGAAAAGCACAACAGTGGCTTGGTTGACAAATCAGCCTTTCCTTAAGTGAGGTTTCCTTGATGTTTGCTCATAACAAAAACAAAAATATGCATTGATTGTATTGTTGAAAGTTATATGTACATGAGTATTTAGATATGCGATCACAATTTGGAATCTTATCTTACCAATAATCCAGACAAGAACAATATCCTTCACTGAAGTGGTGGAATCGGTTTCGATCGAC

Library


Library category	ESTs
watermelon fruit 18d library	4
watermelon fruit 26d library	4
watermelon fruit 34d library	1

Homology

[Close]

BLAST of WMU36714 vs. TAIR10
Match: AT3G04560.1 (AT3G04560.1 unknown protein)

HSP 1 Score: 90.5 bits (223), Expect = 1.3e-18
Identity = 45/56 (80.36%), Postives = 47/56 (83.93%), Query Frame = 3


Query: 264 ASVREQQNRRKQGKSVSGKLDVNGFEWLQQKYANEKISIRHSVGASGDRKAQQWLG 323
           ASVREQ  RRKQGKSV+GKLDV  FE LQ KYANEK+SIR SVGASG+R+AQQWLG
Sbjct: 362 ASVREQHLRRKQGKSVTGKLDVTAFESLQDKYANEKMSIRSSVGASGERRAQQWLG 417

Query: 324  383
           
Sbjct: 422  417

Query: 384  432
           
Sbjct: 482  417

HSP 2 Score: 64.3 bits (155), Expect = 1.0e-10
Identity = 53/163 (32.52%), Postives = 68/163 (41.72%), Query Frame = 3


Query: 57  QQKKNAAPTEEKNQEESDPFGLDAFLPGSLKKSEREKV-----------SNRH*YLSEAC 116
           Q    AA   +    ESDPFGLDA++P S KK+ + K+           + R        
Sbjct: 255 QDVAEAASAGDNEAVESDPFGLDAWIPSSGKKNGKTKIKRTNEDPDAEENKRFLRSKREA 314

Query: 117 L**CYEVHIAATGCDWGNCGASV--------------REQQNRRKQGKSVSGKLD----- 176
           L  C E+        W      +              +++Q   K   SV  +       
Sbjct: 315 LITCLEIAARRYKVPWCQTVIDILVKHAFENVSRFTSQQRQAVEKLWASVREQHLRRKQG 374

Query: 177 --------VNGFEWLQQKYANEKISIRHSVGASGDRKAQQWLG 236
                   V  FE LQ KYANEK+SIR SVGASG+R+AQQWLG
Sbjct: 375 KSVTGKLDVTAFESLQDKYANEKMSIRSSVGASGERRAQQWLG 417

Query: 237  296
           
Sbjct: 435  417

Query: 297  356
           
Sbjct: 495  417

Query: 357  416
           
Sbjct: 555  417

Query: 417  432
           
Sbjct: 615  417

[Close]

BLAST of WMU36714 vs. TrEMBL
Match: A0A061F0V4_THECC (Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_026250 PE=4 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.4e-24
Identity = 74/171 (43.27%), Postives = 88/171 (51.46%), Query Frame = 3


Query: 45  DDEHQQKKNAAPTEEKNQEESDPFGLDAFLPGSLKKSER---------------EKVSNR 104
           DD++ ++   AP EE  ++ESDPFGLDA +P S  K +R               E+ + R
Sbjct: 237 DDDNNKEAIVAPAEENKKDESDPFGLDALIPRSGNKDDRTKGKKDVAAKSRKEDEEETKR 296

Query: 105 H*YLSEACL**CYEVHIAATGCDW---------------------------GNCGASVRE 164
                   L  C E+        W                               ASVRE
Sbjct: 297 FLKSQREALITCLEIAARRYKTPWCQTVIDILVKLAFDNVARFTSRQRDAIEKLWASVRE 356

Query: 165 QQNRRKQGKSVSGKLDVNGFEWLQQKYANEKISIRHSVGASGDRKAQQWLG 224
           QQ RRKQGKSV+GKLDVN FEWLQQKY+ EKISIRHSVGASGDR+ QQWLG
Sbjct: 357 QQIRRKQGKSVTGKLDVNAFEWLQQKYSTEKISIRHSVGASGDRRCQQWLG 407

Query: 225  284
           
Sbjct: 417  407

Query: 285  344
           
Sbjct: 477  407

Query: 345  404
           
Sbjct: 537  407

Query: 405  432
           
Sbjct: 597  407

[Close]

BLAST of WMU36714 vs. TrEMBL
Match: B9I5M0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s04180g PE=4 SV=2)

HSP 1 Score: 120.6 bits (301), Expect = 2.4e-24
Identity = 73/175 (41.71%), Postives = 92/175 (52.57%), Query Frame = 3


Query: 39  STDDEHQQKKN--AAPTEEKNQEESDPFGLDAFLPGSLKKSER---------------EK 98
           +T DE+ ++++  +    E+N++ SDPFGLDA +P ++KK E+               E+
Sbjct: 227 ATTDEYSKREDTCSGAEAEENKDVSDPFGLDALIPSTVKKDEKVKGKKDMPVKVREEEEE 286

Query: 99  VSNRH*YLSEACL**CYEVHIAATGCDW---------------------------GNCGA 158
            S R        L  C E+        W                               A
Sbjct: 287 ESKRFLKYQREALITCLEIAARRYKIPWCQTVIDILVKHAFDNVARFTSCQRDAIQKLWA 346

Query: 159 SVREQQNRRKQGKSVSGKLDVNGFEWLQQKYANEKISIRHSVGASGDRKAQQWLG 218
           S+REQQ RRKQGKSV+GKLDVNGFEWLQQKYA EKISIRHSVG SGDR+A QWLG
Sbjct: 347 SIREQQTRRKQGKSVNGKLDVNGFEWLQQKYAGEKISIRHSVGGSGDRRASQWLG 401

Query: 219  278
           
Sbjct: 407  401

Query: 279  338
           
Sbjct: 467  401

Query: 339  398
           
Sbjct: 527  401

Query: 399  432
           
Sbjct: 587  401

[Close]

BLAST of WMU36714 vs. TrEMBL
Match: I1LBR8_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G167000 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.2e-24
Identity = 71/156 (45.51%), Postives = 82/156 (52.56%), Query Frame = 3


Query: 87  EKNQEESDPFGLDAFLPGSLKKSER--------------EKVSNRH*YLSEACL**CYEV 146
           E  + ++DPFGLDA +P S KK E+              E+ +NR        L  C E+
Sbjct: 247 EGEEAQADPFGLDALIPNSTKKGEKLKAKNEASVKIREDEEETNRFLKSQREALITCLEI 306

Query: 147 HIAATGCDW---------------------------GNCGASVREQQNRRKQGKSVSGKL 206
                   W                           G   AS+REQQ RRKQGKSV+GKL
Sbjct: 307 AARRYKTPWCQTVIDILVKHAFDNVARFTARQRDAVGKLWASIREQQTRRKQGKSVNGKL 366

Query: 207 DVNGFEWLQQKYANEKISIRHSVGASGDRKAQQWLG 266
           DVN FEWLQQKYA EKISIRHSVGASGDR+AQQWLG
Sbjct: 367 DVNAFEWLQQKYAGEKISIRHSVGASGDRRAQQWLG 402

Query: 267  326
           
Sbjct: 427  402

Query: 327  386
           
Sbjct: 487  402

Query: 387  432
           
Sbjct: 547  402

[Close]

BLAST of WMU36714 vs. TrEMBL
Match: I1LBR9_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_10G167000 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.2e-24
Identity = 71/156 (45.51%), Postives = 82/156 (52.56%), Query Frame = 3


Query: 87  EKNQEESDPFGLDAFLPGSLKKSER--------------EKVSNRH*YLSEACL**CYEV 146
           E  + ++DPFGLDA +P S KK E+              E+ +NR        L  C E+
Sbjct: 245 EGEEAQADPFGLDALIPNSTKKGEKLKAKNEASVKIREDEEETNRFLKSQREALITCLEI 304

Query: 147 HIAATGCDW---------------------------GNCGASVREQQNRRKQGKSVSGKL 206
                   W                           G   AS+REQQ RRKQGKSV+GKL
Sbjct: 305 AARRYKTPWCQTVIDILVKHAFDNVARFTARQRDAVGKLWASIREQQTRRKQGKSVNGKL 364

Query: 207 DVNGFEWLQQKYANEKISIRHSVGASGDRKAQQWLG 266
           DVN FEWLQQKYA EKISIRHSVGASGDR+AQQWLG
Sbjct: 365 DVNAFEWLQQKYAGEKISIRHSVGASGDRRAQQWLG 400

Query: 267  326
           
Sbjct: 425  400

Query: 327  386
           
Sbjct: 485  400

Query: 387  432
           
Sbjct: 545  400

[Close]

BLAST of WMU36714 vs. TrEMBL
Match: A0A0B2Q0G5_GLYSO (Uncharacterized protein OS=Glycine soja GN=glysoja_020983 PE=4 SV=1)

HSP 1 Score: 119.4 bits (298), Expect = 5.2e-24
Identity = 71/156 (45.51%), Postives = 82/156 (52.56%), Query Frame = 3


Query: 87  EKNQEESDPFGLDAFLPGSLKKSER--------------EKVSNRH*YLSEACL**CYEV 146
           E  + ++DPFGLDA +P S KK E+              E+ +NR        L  C E+
Sbjct: 244 EGEEAQADPFGLDALIPNSTKKGEKLKAKNEASVKIREDEEETNRFLKSQREALITCLEI 303

Query: 147 HIAATGCDW---------------------------GNCGASVREQQNRRKQGKSVSGKL 206
                   W                           G   AS+REQQ RRKQGKSV+GKL
Sbjct: 304 AARRYKTPWCQTVIDILVKHAFDNVARFTARQRDAVGKLWASIREQQTRRKQGKSVNGKL 363

Query: 207 DVNGFEWLQQKYANEKISIRHSVGASGDRKAQQWLG 266
           DVN FEWLQQKYA EKISIRHSVGASGDR+AQQWLG
Sbjct: 364 DVNAFEWLQQKYAGEKISIRHSVGASGDRRAQQWLG 399

Query: 267  326
           
Sbjct: 424  399

Query: 327  386
           
Sbjct: 484  399

Query: 387  432
           
Sbjct: 544  399

[Close]

BLAST of WMU36714 vs. NCBI nr
Match: gi|1009117509|ref|XP_015875355.1| (PREDICTED: uncharacterized protein LOC107412161 [Ziziphus jujuba])

HSP 1 Score: 125.9 bits (315), Expect = 8.0e-26
Identity = 76/171 (44.44%), Postives = 91/171 (53.22%), Query Frame = 3


Query: 36  ESTDDEHQQKKNAAPTEEKNQEESDPFGLDAFLPGSLKKSEREKVSNRH*YLSE------ 95
           E+TD++ Q K++ A  EE N++ESDPFGLDA +P S KK E+ K       + E      
Sbjct: 247 ETTDEDKQTKQDVA-AEENNKQESDPFGLDALIPNSGKKGEKTKGKEAATKIKEEDDTKR 306

Query: 96  ------ACL**CYEVHIAATGCDW---------------------------GNCGASVRE 155
                   L  C E+        W                               AS+RE
Sbjct: 307 FLKSQREALIICLEIAARRYKTPWCQTVIDILVKHAHDNVARFTSRQRDAIEKLWASIRE 366

Query: 156 QQNRRKQGKSVSGKLDVNGFEWLQQKYANEKISIRHSVGASGDRKAQQWLG 215
           Q  RRK GKSV+GKLDVN FEWLQQKYANEKISIRH+VG SGDR+AQQWLG
Sbjct: 367 QHTRRKNGKSVTGKLDVNAFEWLQQKYANEKISIRHAVGGSGDRRAQQWLG 416

Query: 216  275
           
Sbjct: 427  416

Query: 276  335
           
Sbjct: 487  416

Query: 336  395
           
Sbjct: 547  416

Query: 396  432
           
Sbjct: 607  416

[Close]

BLAST of WMU36714 vs. NCBI nr
Match: gi|743888726|ref|XP_011038530.1| (PREDICTED: uncharacterized protein LOC105135376 isoform X1 [Populus euphratica])

HSP 1 Score: 123.6 bits (309), Expect = 4.0e-25
Identity = 75/175 (42.86%), Postives = 92/175 (52.57%), Query Frame = 3


Query: 39  STDDEHQQKKNAAPTEE--KNQEESDPFGLDAFLPGSLKKSER---------------EK 98
           +T DE+ +++NA  + E  +N++ SDPFGLDA +P ++KK E+               E 
Sbjct: 230 ATTDEYSKRENACSSAEAKENKDVSDPFGLDALIPSTVKKDEKVKGKKDMPAKVREEEEV 289

Query: 99  VSNRH*YLSEACL**CYEVHIAATGCDW---------------------------GNCGA 158
            S R        L  C E+        W                               A
Sbjct: 290 ESKRFLKYQREALITCLEIAARRYKTPWCQTVIDILVKHAFDNVARFTSCQRDAIQKLWA 349

Query: 159 SVREQQNRRKQGKSVSGKLDVNGFEWLQQKYANEKISIRHSVGASGDRKAQQWLG 218
           S+REQQ RRKQGKSV+GKLDVNGFEWLQQKYA EKISIRHSVG SGDR+A QWLG
Sbjct: 350 SIREQQTRRKQGKSVNGKLDVNGFEWLQQKYAGEKISIRHSVGGSGDRRASQWLG 404

Query: 219  278
           
Sbjct: 410  404

Query: 279  338
           
Sbjct: 470  404

Query: 339  398
           
Sbjct: 530  404

Query: 399  432
           
Sbjct: 590  404

[Close]

BLAST of WMU36714 vs. NCBI nr
Match: gi|743888730|ref|XP_011038531.1| (PREDICTED: uncharacterized protein LOC105135376 isoform X2 [Populus euphratica])

HSP 1 Score: 123.6 bits (309), Expect = 4.0e-25
Identity = 75/175 (42.86%), Postives = 92/175 (52.57%), Query Frame = 3


Query: 39  STDDEHQQKKNAAPTEE--KNQEESDPFGLDAFLPGSLKKSER---------------EK 98
           +T DE+ +++NA  + E  +N++ SDPFGLDA +P ++KK E+               E 
Sbjct: 227 ATTDEYSKRENACSSAEAKENKDVSDPFGLDALIPSTVKKDEKVKGKKDMPAKVREEEEV 286

Query: 99  VSNRH*YLSEACL**CYEVHIAATGCDW---------------------------GNCGA 158
            S R        L  C E+        W                               A
Sbjct: 287 ESKRFLKYQREALITCLEIAARRYKTPWCQTVIDILVKHAFDNVARFTSCQRDAIQKLWA 346

Query: 159 SVREQQNRRKQGKSVSGKLDVNGFEWLQQKYANEKISIRHSVGASGDRKAQQWLG 218
           S+REQQ RRKQGKSV+GKLDVNGFEWLQQKYA EKISIRHSVG SGDR+A QWLG
Sbjct: 347 SIREQQTRRKQGKSVNGKLDVNGFEWLQQKYAGEKISIRHSVGGSGDRRASQWLG 401

Query: 219  278
           
Sbjct: 407  401

Query: 279  338
           
Sbjct: 467  401

Query: 339  398
           
Sbjct: 527  401

Query: 399  432
           
Sbjct: 587  401

[Close]

BLAST of WMU36714 vs. NCBI nr
Match: gi|590642293|ref|XP_007030477.1| (Uncharacterized protein isoform 1 [Theobroma cacao])

HSP 1 Score: 121.7 bits (304), Expect = 1.5e-24
Identity = 74/171 (43.27%), Postives = 88/171 (51.46%), Query Frame = 3


Query: 45  DDEHQQKKNAAPTEEKNQEESDPFGLDAFLPGSLKKSER---------------EKVSNR 104
           DD++ ++   AP EE  ++ESDPFGLDA +P S  K +R               E+ + R
Sbjct: 237 DDDNNKEAIVAPAEENKKDESDPFGLDALIPRSGNKDDRTKGKKDVAAKSRKEDEEETKR 296

Query: 105 H*YLSEACL**CYEVHIAATGCDW---------------------------GNCGASVRE 164
                   L  C E+        W                               ASVRE
Sbjct: 297 FLKSQREALITCLEIAARRYKTPWCQTVIDILVKLAFDNVARFTSRQRDAIEKLWASVRE 356

Query: 165 QQNRRKQGKSVSGKLDVNGFEWLQQKYANEKISIRHSVGASGDRKAQQWLG 224
           QQ RRKQGKSV+GKLDVN FEWLQQKY+ EKISIRHSVGASGDR+ QQWLG
Sbjct: 357 QQIRRKQGKSVTGKLDVNAFEWLQQKYSTEKISIRHSVGASGDRRCQQWLG 407

Query: 225  284
           
Sbjct: 417  407

Query: 285  344
           
Sbjct: 477  407

Query: 345  404
           
Sbjct: 537  407

Query: 405  432
           
Sbjct: 597  407

[Close]

BLAST of WMU36714 vs. NCBI nr
Match: gi|571480735|ref|XP_006588401.1| (PREDICTED: uncharacterized protein LOC100500440 isoform X2 [Glycine max])

HSP 1 Score: 121.3 bits (303), Expect = 2.0e-24
Identity = 71/156 (45.51%), Postives = 82/156 (52.56%), Query Frame = 3


Query: 87  EKNQEESDPFGLDAFLPGSLKKSER--------------EKVSNRH*YLSEACL**CYEV 146
           E  + ++DPFGLDA +P S KK E+              E+ +NR        L  C E+
Sbjct: 245 EGEEAQADPFGLDALIPNSTKKGEKLKAKNEASVKIREDEEETNRFLKSQREALITCLEI 304

Query: 147 HIAATGCDW---------------------------GNCGASVREQQNRRKQGKSVSGKL 206
                   W                           G   AS+REQQ RRKQGKSV+GKL
Sbjct: 305 AARRYKTPWCQTVIDILVKHAFDNVARFTARQRDAVGKLWASIREQQTRRKQGKSVNGKL 364

Query: 207 DVNGFEWLQQKYANEKISIRHSVGASGDRKAQQWLG 266
           DVN FEWLQQKYA EKISIRHSVGASGDR+AQQWLG
Sbjct: 365 DVNAFEWLQQKYAGEKISIRHSVGASGDRRAQQWLG 400

Query: 267  326
           
Sbjct: 425  400

Query: 327  386
           
Sbjct: 485  400

Query: 387  432
           
Sbjct: 545  400

The following BLAST results are available for this feature:

BLAST of WMU36714 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04560.1	1.3e-18	80.36	unknown protein	[more]

BLAST of WMU36714 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A061F0V4_THECC	1.4e-24	43.27	Uncharacterized protein isoform 1 OS=Theobroma cacao GN=TCM_026250 PE=4 SV=1	[more]
B9I5M0_POPTR	2.4e-24	41.71	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0013s04180g PE=4 SV=2	[more]
I1LBR8_SOYBN	5.2e-24	45.51	Uncharacterized protein OS=Glycine max GN=GLYMA_10G167000 PE=4 SV=1	[more]
I1LBR9_SOYBN	5.2e-24	45.51	Uncharacterized protein OS=Glycine max GN=GLYMA_10G167000 PE=4 SV=1	[more]
A0A0B2Q0G5_GLYSO	5.2e-24	45.51	Uncharacterized protein OS=Glycine soja GN=glysoja_020983 PE=4 SV=1	[more]

BLAST of WMU36714 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|1009117509\|ref\|XP_015875355.1\|	8.0e-26	44.44	PREDICTED: uncharacterized protein LOC107412161 [Ziziphus jujuba]	[more]
gi\|743888726\|ref\|XP_011038530.1\|	4.0e-25	42.86	PREDICTED: uncharacterized protein LOC105135376 isoform X1 [Populus euphratica]	[more]
gi\|743888730\|ref\|XP_011038531.1\|	4.0e-25	42.86	PREDICTED: uncharacterized protein LOC105135376 isoform X2 [Populus euphratica]	[more]
gi\|590642293\|ref\|XP_007030477.1\|	1.5e-24	43.27	Uncharacterized protein isoform 1 [Theobroma cacao]	[more]
gi\|571480735\|ref\|XP_006588401.1\|	2.0e-24	45.51	PREDICTED: uncharacterized protein LOC100500440 isoform X2 [Glycine max]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla002978	Cla002978	gene
Cla002979	Cla002979	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S2_0070077	S2_0070077	EST
S2_0070261	S2_0070261	EST
S2_0095446	S2_0095446	EST
S2_0098928	S2_0098928	EST
S3_0067915	S3_0067915	EST
S3_0120322	S3_0120322	EST
S3_0134596	S3_0134596	EST
S3_0166424	S3_0166424	EST
S4_0095582	S4_0095582	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR36749	FAMILY NOT NAMED	coord: 58..144 score: 5.7