WMU32458 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU32458
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Tubulin-specific chaperone C
Location	Chr7 : 28762436 .. 28763250 (+)
Sequence length	815

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CGTTAGGGCATTATTTATTCATAAACTAAGAAACTGTAAAGTTTATACAGGACCTGTAATGGGTTCAATTCTAATCGATGATGTTGAGGGGTGTACCTTTGCAATGGCCTCCCATCAAATTCGGATTCACAATGCGAAGAACAGCGATTTCTATCTCAGAGTCAAGAGTAGGCCGATCATTGAAGATAGTCGGAGTGTGCGATTCGCACCGTATTGTGTGAGCTACGAAGGAATTGAAGAAGATCTCAGAGATGCGAGCCTTGGTGAGGAGACAGGAAATTGGGAGAATGTAGATGATTTTCGTTGGTTGCGAGCGGTGCAGTCGCCGAACTGGTCGATTTTGGCAGAGGATGAGCGGATTGACACCGTCAAAATCTGATTCACAGAAGGTCGAGCCTTTGAGAGTTAAGTTTTTCATCTCTACTTCTGATAAATCCCAAGTTTTCTTTGATGGTTTTTTGTTGGTTTATAGAGCAGGATGCATCATAGAGAAATTTAAATGGTTGATTTTGCTGTGTTGTGTTAGTCTTGTTTACAAAACTGGGAATCCTAGCACATTCTTTCCCTTTCAATTGGTTGATTTTTCAACAAATATTTCTTGGCTTGGCTGTTTTTTCTTGCTGCCTTGTGAGTACTGAGTGAGTTGCTATTAGCCACCACTTCACATCTTTGACTGCAGGAATATTATTGACACTCATGTATCAATGAAACATTATTTCATAACTATACATTAGTTCTGGAATACGTTTTGTAGGCTTCCGGCTTCCTGCTTTATATATAACTTTGGCTAATGTAATAACGACGTGAATTTATAC

Library


Library category	ESTs
watermelon fruit 10d library	4
watermelon fruit 34d library	1
Watermelon normalization and subtraction library	1

Homology

[Close]

BLAST of WMU32458 vs. TAIR10
Match: AT4G39920.1 (AT4G39920.1 C-CAP/cofactor C-like domain-containing protein)

HSP 1 Score: 195.7 bits (496), Expect = 3.8e-50
Identity = 89/125 (71.20%), Postives = 102/125 (81.60%), Query Frame = 2


Query: 2   VRALFIHKLRNCKVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVKSRPII 61
           V ALF+H+L+ C VYTGPV+GSILIDDVE C   +ASHQIRIH A+ SDFYLRV+SRPII
Sbjct: 217 VNALFLHRLKKCSVYTGPVIGSILIDDVEDCVLVLASHQIRIHCARKSDFYLRVRSRPII 276

Query: 62  EDSRSVRFAPYCVSYEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERI 121
           EDS  VRFAPYC+ Y+GI+EDL+ A L EET NW NVDDFRWLRAVQSPNWS+L E+ER+
Sbjct: 277 EDSNGVRFAPYCLDYKGIDEDLKTAGLEEETNNWANVDDFRWLRAVQSPNWSLLPEEERV 336

Query: 122 DTVKI 181
             + I
Sbjct: 337 SLLTI 341

Query: 182  241
           
Sbjct: 397  341

Query: 242  301
           
Sbjct: 457  341

Query: 302  361
           
Sbjct: 517  341

Query: 362  377
           
Sbjct: 577  341

[Close]

BLAST of WMU32458 vs. Swiss-Prot
Match: TBCC_ARATH (Tubulin-folding cofactor C OS=Arabidopsis thaliana GN=TFCC PE=1 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 6.7e-49
Identity = 89/125 (71.20%), Postives = 102/125 (81.60%), Query Frame = 2


Query: 2   VRALFIHKLRNCKVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVKSRPII 61
           V ALF+H+L+ C VYTGPV+GSILIDDVE C   +ASHQIRIH A+ SDFYLRV+SRPII
Sbjct: 217 VNALFLHRLKKCSVYTGPVIGSILIDDVEDCVLVLASHQIRIHCARKSDFYLRVRSRPII 276

Query: 62  EDSRSVRFAPYCVSYEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERI 121
           EDS  VRFAPYC+ Y+GI+EDL+ A L EET NW NVDDFRWLRAVQSPNWS+L E+ER+
Sbjct: 277 EDSNGVRFAPYCLDYKGIDEDLKTAGLEEETNNWANVDDFRWLRAVQSPNWSLLPEEERV 336

Query: 122 DTVKI 181
             + I
Sbjct: 337 SLLTI 341

Query: 182  241
           
Sbjct: 397  341

Query: 242  301
           
Sbjct: 457  341

Query: 302  361
           
Sbjct: 517  341

Query: 362  377
           
Sbjct: 577  341

[Close]

BLAST of WMU32458 vs. Swiss-Prot
Match: TBCC_MOUSE (Tubulin-specific chaperone C OS=Mus musculus GN=Tbcc PE=1 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.6e-26
Identity = 56/117 (47.86%), Postives = 74/117 (63.25%), Query Frame = 2


Query: 11  LFIHKLRNCKVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVKSRPIIEDS 70
           L + K R CKV  GPV  S+ ++D   C  A+A  Q+R+H  K++  +L+V SR I+ED 
Sbjct: 220 LRLAKARGCKVLCGPVTTSVFLEDCRDCVLAVACQQLRVHTTKDTRVFLQVTSRAIVEDC 279

Query: 71  RSVRFAPYCVSYEGIEEDLRDASLGEETGNWENVDDFRWL-RAVQSPNWSILAEDER 130
             ++FAPY  SY GI++D +D+ L     NW+ VDDF WL R V SPNWSIL E+ER
Sbjct: 280 SGIQFAPYTWSYPGIDKDFQDSGLDRSKNNWDQVDDFNWLARNVASPNWSILPEEER 336

Query: 131  190
           
Sbjct: 340  336

Query: 191  250
           
Sbjct: 400  336

Query: 251  310
           
Sbjct: 460  336

Query: 311  359
           
Sbjct: 520  336

[Close]

BLAST of WMU32458 vs. Swiss-Prot
Match: TBCC_HUMAN (Tubulin-specific chaperone C OS=Homo sapiens GN=TBCC PE=1 SV=2)

HSP 1 Score: 112.5 bits (280), Expect = 7.5e-24
Identity = 52/117 (44.44%), Postives = 72/117 (61.54%), Query Frame = 2


Query: 11  LFIHKLRNCKVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVKSRPIIEDS 70
           L + K  +CK+  GPV  S+ ++D   C  A+A  Q+RIH+ K++  +L+V SR I+ED 
Sbjct: 225 LRLTKAHSCKLLCGPVSTSVFLEDCSDCVLAVACQQLRIHSTKDTRIFLQVTSRAIVEDC 284

Query: 71  RSVRFAPYCVSYEGIEEDLRDASLGEETGNWENVDDFRWL-RAVQSPNWSILAEDER 130
             ++FAPY  SY  I++D   + L     NW +VDDF WL R + SPNWSIL E+ER
Sbjct: 285 SGIQFAPYTWSYPEIDKDFESSGLDRSKNNWNDVDDFNWLARDMASPNWSILPEEER 341

Query: 131  190
           
Sbjct: 345  341

Query: 191  250
           
Sbjct: 405  341

Query: 251  310
           
Sbjct: 465  341

Query: 311  359
           
Sbjct: 525  341

[Close]

BLAST of WMU32458 vs. Swiss-Prot
Match: TBCC_BOVIN (Tubulin-specific chaperone C OS=Bos taurus GN=TBCC PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.7e-23
Identity = 50/117 (42.74%), Postives = 72/117 (61.54%), Query Frame = 2


Query: 11  LFIHKLRNCKVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVKSRPIIEDS 70
           L + K + C +  GPV  S+ ++D   C  A+A  Q+R+H  K++  +L+V SR I+ED 
Sbjct: 224 LRLTKAQGCTLLCGPVSTSVFLEDCSDCVLAVACQQLRVHTTKDTRIFLQVTSRAIMEDC 283

Query: 71  RSVRFAPYCVSYEGIEEDLRDASLGEETGNWENVDDFRWL-RAVQSPNWSILAEDER 130
             ++FAPY  SY GI++D   + L +   NW +VDDF WL R V SPNW++L E+ER
Sbjct: 284 TGIQFAPYTWSYPGIDKDFEGSGLDKNKNNWNDVDDFNWLARDVASPNWNVLPEEER 340

Query: 131  190
           
Sbjct: 344  340

Query: 191  250
           
Sbjct: 404  340

Query: 251  310
           
Sbjct: 464  340

Query: 311  359
           
Sbjct: 524  340

[Close]

BLAST of WMU32458 vs. Swiss-Prot
Match: TBCC_PONAB (Tubulin-specific chaperone C OS=Pongo abelii GN=TBCC PE=2 SV=1)

HSP 1 Score: 110.5 bits (275), Expect = 2.8e-23
Identity = 51/117 (43.59%), Postives = 71/117 (60.68%), Query Frame = 2


Query: 11  LFIHKLRNCKVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVKSRPIIEDS 70
           L + K  +CK+  GPV  S+ ++D   C  A+A  Q+RIH+ K++  +L+V SR I+ED 
Sbjct: 225 LRLTKAHSCKLLCGPVSTSVFLEDCSDCVLAVACQQLRIHSTKDTRIFLQVTSRAIVEDC 284

Query: 71  RSVRFAPYCVSYEGIEEDLRDASLGEETGNWENVDDFRWL-RAVQSPNWSILAEDER 130
             ++FAPY  SY  I++D   + L     NW +VDDF WL R + SPNW IL E+ER
Sbjct: 285 SGIQFAPYTWSYPEIDKDFESSGLDRSKNNWNDVDDFNWLARDMASPNWCILPEEER 341

Query: 131  190
           
Sbjct: 345  341

Query: 191  250
           
Sbjct: 405  341

Query: 251  310
           
Sbjct: 465  341

Query: 311  359
           
Sbjct: 525  341

[Close]

BLAST of WMU32458 vs. TrEMBL
Match: A0A0A0KZA3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G026830 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 1.7e-59
Identity = 117/130 (90.00%), Postives = 120/130 (92.31%), Query Frame = 2


Query: 2   VRALFIHKLRNCKVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVKSRPII 61
           VRALFIHKLRNCKVYTGPVMGSILIDDVE CTFAMASHQIRIHNAK SDFYLRV+SRPII
Sbjct: 227 VRALFIHKLRNCKVYTGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPII 286

Query: 62  EDSRSVRFAPYCVSYEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERI 121
           EDS SVRFAPY VSYEGIEEDL DA+LG ETGNWENVDDFRWLRAV SPNWSIL EDERI
Sbjct: 287 EDSSSVRFAPYRVSYEGIEEDLTDATLGVETGNWENVDDFRWLRAVPSPNWSILPEDERI 346

Query: 122 DTVKI*FTEG 181
           DT+KI  TEG
Sbjct: 347 DTIKISPTEG 356

Query: 182  241
           
Sbjct: 407  356

Query: 242  301
           
Sbjct: 467  356

Query: 302  361
           
Sbjct: 527  356

Query: 362  392
           
Sbjct: 587  356

[Close]

BLAST of WMU32458 vs. TrEMBL
Match: A0A151S385_CAJCA (Tubulin-specific chaperone C OS=Cajanus cajan GN=KK1_029000 PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.9e-50
Identity = 94/125 (75.20%), Postives = 108/125 (86.40%), Query Frame = 2


Query: 2   VRALFIHKLRNCKVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVKSRPII 61
           VRALF+H+LRNC+VY GPV GS+LI++ EGC FA+ASHQIRIH AK SDFYLRV+SRPII
Sbjct: 184 VRALFVHRLRNCRVYVGPVTGSVLIEEAEGCVFALASHQIRIHAAKRSDFYLRVRSRPII 243

Query: 62  EDSRSVRFAPYCVSYEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERI 121
           EDS  VRFAPYC+SYEGIEEDLR A L  ETGNW NVDDFRWLRAVQSPNWS+L E+ER+
Sbjct: 244 EDSNGVRFAPYCLSYEGIEEDLRGAGLDAETGNWANVDDFRWLRAVQSPNWSVLPENERV 303

Query: 122 DTVKI 181
             + +
Sbjct: 304 GVLHL 308

Query: 182  241
           
Sbjct: 364  308

Query: 242  301
           
Sbjct: 424  308

Query: 302  361
           
Sbjct: 484  308

Query: 362  377
           
Sbjct: 544  308

[Close]

BLAST of WMU32458 vs. TrEMBL
Match: M5VYX5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007827mg PE=4 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 1.9e-50
Identity = 98/125 (78.40%), Postives = 108/125 (86.40%), Query Frame = 2


Query: 2   VRALFIHKLRNCKVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVKSRPII 61
           VRALF+H+LRNCKVYTGPV GS+LID VE C F MASHQIRIHNAK SDFYLRV+SRPII
Sbjct: 224 VRALFVHRLRNCKVYTGPVTGSVLIDGVERCVFIMASHQIRIHNAKRSDFYLRVRSRPII 283

Query: 62  EDSRSVRFAPYCVSYEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERI 121
           EDS  VRFAPYC+SY+GIE++LR+ASL  ET NW NVDDF WLRAVQSPNWSIL EDER+
Sbjct: 284 EDSCGVRFAPYCLSYQGIEDELREASLDGETKNWSNVDDFLWLRAVQSPNWSILPEDERV 343

Query: 122 DTVKI 181
             V I
Sbjct: 344 GLVDI 348

Query: 182  241
           
Sbjct: 404  348

Query: 242  301
           
Sbjct: 464  348

Query: 302  361
           
Sbjct: 524  348

Query: 362  377
           
Sbjct: 584  348

[Close]

BLAST of WMU32458 vs. TrEMBL
Match: A0A0L9TJW6_PHAAN (Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g027600 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 7.2e-50
Identity = 92/125 (73.60%), Postives = 107/125 (85.60%), Query Frame = 2


Query: 2   VRALFIHKLRNCKVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVKSRPII 61
           VRALF+H+L+NC+VY GPV GS+LI++ EGC F MASHQIRIH+A+ SDFYLRV+S+PII
Sbjct: 200 VRALFVHRLKNCRVYVGPVTGSVLIEEAEGCVFVMASHQIRIHSARKSDFYLRVRSKPII 259

Query: 62  EDSRSVRFAPYCVSYEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERI 121
           EDS  VRFAPYC+SY GIEEDLR A L  ETGNWENVDDFRWLRAVQSPNWS+L E ER+
Sbjct: 260 EDSNGVRFAPYCLSYPGIEEDLRGAGLDTETGNWENVDDFRWLRAVQSPNWSVLPESERV 319

Query: 122 DTVKI 181
             V +
Sbjct: 320 GIVDV 324

Query: 182  241
           
Sbjct: 380  324

Query: 242  301
           
Sbjct: 440  324

Query: 302  361
           
Sbjct: 500  324

Query: 362  377
           
Sbjct: 560  324

[Close]

BLAST of WMU32458 vs. TrEMBL
Match: A0A0K9R8H0_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_094340 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 7.2e-50
Identity = 90/124 (72.58%), Postives = 109/124 (87.90%), Query Frame = 2


Query: 5   RALFIHKLRNCKVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVKSRPIIE 64
           RA+FIH+LRNCKVY GP +GS+LIDDVEGC F +ASHQIRIHNA+  DFYLRV+S PIIE
Sbjct: 215 RAIFIHRLRNCKVYAGPALGSVLIDDVEGCVFVLASHQIRIHNARRCDFYLRVRSHPIIE 274

Query: 65  DSRSVRFAPYCVSYEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERID 124
           DS  VRFAPYC+ Y+GIEEDL ++ L EETG+WENVDDF+WLRAVQSPNWS+L E+ERI 
Sbjct: 275 DSSEVRFAPYCLHYDGIEEDLTESRLDEETGSWENVDDFKWLRAVQSPNWSVLPENERIS 334

Query: 125 TVKI 184
           ++++
Sbjct: 335 SLRV 338

Query: 185  244
           
Sbjct: 395  338

Query: 245  304
           
Sbjct: 455  338

Query: 305  364
           
Sbjct: 515  338

Query: 365  377
           
Sbjct: 575  338

[Close]

BLAST of WMU32458 vs. NCBI nr
Match: gi|659107707|ref|XP_008453815.1| (PREDICTED: tubulin-folding cofactor C [Cucumis melo])

HSP 1 Score: 244.6 bits (623), Expect = 2.0e-61
Identity = 118/130 (90.77%), Postives = 120/130 (92.31%), Query Frame = 2


Query: 2   VRALFIHKLRNCKVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVKSRPII 61
           VRALFIHKLRNCKVYTGPVMGSILIDDVE CTFAMASHQIRIHNAKNSDFYLRV+SRPII
Sbjct: 227 VRALFIHKLRNCKVYTGPVMGSILIDDVEECTFAMASHQIRIHNAKNSDFYLRVRSRPII 286

Query: 62  EDSRSVRFAPYCVSYEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERI 121
           EDS SVRFAPY VSYEGIEEDL DASLG ETGNWENVDDF WLRAV SPNWSIL EDERI
Sbjct: 287 EDSSSVRFAPYRVSYEGIEEDLTDASLGVETGNWENVDDFLWLRAVPSPNWSILPEDERI 346

Query: 122 DTVKI*FTEG 181
           DT+KI  TEG
Sbjct: 347 DTIKISLTEG 356

Query: 182  241
           
Sbjct: 407  356

Query: 242  301
           
Sbjct: 467  356

Query: 302  361
           
Sbjct: 527  356

Query: 362  392
           
Sbjct: 587  356

[Close]

BLAST of WMU32458 vs. NCBI nr
Match: gi|449458285|ref|XP_004146878.1| (PREDICTED: tubulin-folding cofactor C [Cucumis sativus])

HSP 1 Score: 242.3 bits (617), Expect = 1.0e-60
Identity = 117/130 (90.00%), Postives = 120/130 (92.31%), Query Frame = 2


Query: 2   VRALFIHKLRNCKVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVKSRPII 61
           VRALFIHKLRNCKVYTGPVMGSILIDDVE CTFAMASHQIRIHNAK SDFYLRV+SRPII
Sbjct: 227 VRALFIHKLRNCKVYTGPVMGSILIDDVEECTFAMASHQIRIHNAKKSDFYLRVRSRPII 286

Query: 62  EDSRSVRFAPYCVSYEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERI 121
           EDS SVRFAPY VSYEGIEEDL DA+LG ETGNWENVDDFRWLRAV SPNWSIL EDERI
Sbjct: 287 EDSSSVRFAPYRVSYEGIEEDLTDATLGVETGNWENVDDFRWLRAVPSPNWSILPEDERI 346

Query: 122 DTVKI*FTEG 181
           DT+KI  TEG
Sbjct: 347 DTIKISPTEG 356

Query: 182  241
           
Sbjct: 407  356

Query: 242  301
           
Sbjct: 467  356

Query: 302  361
           
Sbjct: 527  356

Query: 362  392
           
Sbjct: 587  356

[Close]

BLAST of WMU32458 vs. NCBI nr
Match: gi|1009145949|ref|XP_015890618.1| (PREDICTED: tubulin-folding cofactor C [Ziziphus jujuba])

HSP 1 Score: 220.7 bits (561), Expect = 3.1e-54
Identity = 103/134 (76.87%), Postives = 115/134 (85.82%), Query Frame = 2


Query: 2   VRALFIHKLRNCKVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVKSRPII 61
           VRALFIH+LR C++Y GPVMGSILID VE C F MASHQIRIHNAK SDFYLRV+SRPII
Sbjct: 236 VRALFIHRLRKCRIYVGPVMGSILIDGVEECVFVMASHQIRIHNAKASDFYLRVRSRPII 295

Query: 62  EDSRSVRFAPYCVSYEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERI 121
           EDS SVRFAPYC+SYEGI+ DL++ASL EETGNW NVDDFRWLRAVQSPNWS+L E ER+
Sbjct: 296 EDSSSVRFAPYCLSYEGIDRDLKEASLDEETGNWANVDDFRWLRAVQSPNWSVLPEAERV 355

Query: 122 DTVKI*FTEGRAFE 181
             VKI  ++ RA E
Sbjct: 356 RIVKISNSDSRAEE 369

Query: 182  241
           
Sbjct: 416  369

Query: 242  301
           
Sbjct: 476  369

Query: 302  361
           
Sbjct: 536  369

Query: 362  404
           
Sbjct: 596  369

[Close]

BLAST of WMU32458 vs. NCBI nr
Match: gi|645219110|ref|XP_008234075.1| (PREDICTED: tubulin-folding cofactor C [Prunus mume])

HSP 1 Score: 215.7 bits (548), Expect = 1.0e-52
Identity = 98/125 (78.40%), Postives = 110/125 (88.00%), Query Frame = 2


Query: 2   VRALFIHKLRNCKVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVKSRPII 61
           VRALF+H+LRNC+VYTGPV GS+LID VEGC F MASHQIRIHNAK SDFYLRV+SRPII
Sbjct: 224 VRALFVHRLRNCRVYTGPVTGSVLIDGVEGCVFIMASHQIRIHNAKRSDFYLRVRSRPII 283

Query: 62  EDSRSVRFAPYCVSYEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERI 121
           EDS  VRFAPYC+SY+GIE++LR+ASL EET NW NVDDF WLRAVQSPNWS+L EDER+
Sbjct: 284 EDSCGVRFAPYCLSYQGIEDELREASLDEETENWSNVDDFLWLRAVQSPNWSVLPEDERV 343

Query: 122 DTVKI 181
             V I
Sbjct: 344 GLVDI 348

Query: 182  241
           
Sbjct: 404  348

Query: 242  301
           
Sbjct: 464  348

Query: 302  361
           
Sbjct: 524  348

Query: 362  377
           
Sbjct: 584  348

[Close]

BLAST of WMU32458 vs. NCBI nr
Match: gi|729314857|ref|XP_010531371.1| (PREDICTED: tubulin-folding cofactor C [Tarenaya hassleriana])

HSP 1 Score: 214.5 bits (545), Expect = 2.2e-52
Identity = 98/125 (78.40%), Postives = 108/125 (86.40%), Query Frame = 2


Query: 2   VRALFIHKLRNCKVYTGPVMGSILIDDVEGCTFAMASHQIRIHNAKNSDFYLRVKSRPII 61
           V ALF+H+LRNCKVYTGPV+GSILIDDVE C F +ASHQIRIH+AK SDFYLRV+SRPII
Sbjct: 216 VNALFLHRLRNCKVYTGPVIGSILIDDVEDCVFVLASHQIRIHHAKKSDFYLRVRSRPII 275

Query: 62  EDSRSVRFAPYCVSYEGIEEDLRDASLGEETGNWENVDDFRWLRAVQSPNWSILAEDERI 121
           EDS  VRFAPYC+ YEGIEEDL+ A+L EETGNW NVDDFRWLRAVQSPNW IL EDE I
Sbjct: 276 EDSNGVRFAPYCLEYEGIEEDLKAATLAEETGNWANVDDFRWLRAVQSPNWCILPEDEWI 335

Query: 122 DTVKI 181
             V +
Sbjct: 336 SRVSV 340

Query: 182  241
           
Sbjct: 396  340

Query: 242  301
           
Sbjct: 456  340

Query: 302  361
           
Sbjct: 516  340

Query: 362  377
           
Sbjct: 576  340

The following BLAST results are available for this feature:

BLAST of WMU32458 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G39920.1	3.8e-50	71.20	C-CAP/cofactor C-like domain-containing protein	[more]

BLAST of WMU32458 vs. Swiss-Prot


Match Name	E-value	Identity	Description
TBCC_ARATH	6.7e-49	71.20	Tubulin-folding cofactor C OS=Arabidopsis thaliana GN=TFCC PE=1 SV=1	[more]
TBCC_MOUSE	1.6e-26	47.86	Tubulin-specific chaperone C OS=Mus musculus GN=Tbcc PE=1 SV=1	[more]
TBCC_HUMAN	7.5e-24	44.44	Tubulin-specific chaperone C OS=Homo sapiens GN=TBCC PE=1 SV=2	[more]
TBCC_BOVIN	1.7e-23	42.74	Tubulin-specific chaperone C OS=Bos taurus GN=TBCC PE=2 SV=1	[more]
TBCC_PONAB	2.8e-23	43.59	Tubulin-specific chaperone C OS=Pongo abelii GN=TBCC PE=2 SV=1	[more]

BLAST of WMU32458 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KZA3_CUCSA	1.7e-59	90.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G026830 PE=4 SV=1	[more]
A0A151S385_CAJCA	1.9e-50	75.20	Tubulin-specific chaperone C OS=Cajanus cajan GN=KK1_029000 PE=4 SV=1	[more]
M5VYX5_PRUPE	1.9e-50	78.40	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa007827mg PE=4 SV=1	[more]
A0A0L9TJW6_PHAAN	7.2e-50	73.60	Uncharacterized protein OS=Phaseolus angularis GN=LR48_Vigan01g027600 PE=4 SV=1	[more]
A0A0K9R8H0_SPIOL	7.2e-50	72.58	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_094340 PE=4 SV=1	[more]

BLAST of WMU32458 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659107707\|ref\|XP_008453815.1\|	2.0e-61	90.77	PREDICTED: tubulin-folding cofactor C [Cucumis melo]	[more]
gi\|449458285\|ref\|XP_004146878.1\|	1.0e-60	90.00	PREDICTED: tubulin-folding cofactor C [Cucumis sativus]	[more]
gi\|1009145949\|ref\|XP_015890618.1\|	3.1e-54	76.87	PREDICTED: tubulin-folding cofactor C [Ziziphus jujuba]	[more]
gi\|645219110\|ref\|XP_008234075.1\|	1.0e-52	78.40	PREDICTED: tubulin-folding cofactor C [Prunus mume]	[more]
gi\|729314857\|ref\|XP_010531371.1\|	2.2e-52	78.40	PREDICTED: tubulin-folding cofactor C [Tarenaya hassleriana]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR006599	CARP_motif
IPR012945	Tubulin-bd_cofactor_C_dom
IPR017901	C-CAP_CF_C-like
IPR027684	TBCC

Vocabulary: **Biological Process**
Term	Definition
GO:0007023	post-chaperonin tubulin folding pathway

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007023	post-chaperonin tubulin folding pathway

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla010675	Cla010675	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S1_0026100	S1_0026100	EST
S1_0054499	S1_0054499	EST
S1_0059178	S1_0059178	EST
S1_0090162	S1_0090162	EST
S4_0116578	S4_0116578	EST
WMN28A06	WMN28A06	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006599	CARP motif	SMART	SM00673	carp	coord: 9..43 score: 3.
IPR012945	Tubulin binding cofactor C-like domain	PFAM	PF07986	TBCC	coord: 2..81 score: 1.3
IPR017901	C-CAP/cofactor C-like domain	PROFILE	PS51329	C_CAP_COFACTOR_C	coord: 1..83 score: 25
IPR027684	Tubulin-specific chaperone C	PANTHER	PTHR15139	TUBULIN FOLDING COFACTOR C	coord: 1..101 score: 5.7
None	No IPR available	PANTHER	PTHR15139:SF0	TUBULIN-SPECIFIC CHAPERONE C	coord: 1..101 score: 5.7