WMU30674 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU30674
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Exocyst subunit exo70 family protein E1
Location	Chr7 : 29846507 .. 29846960 (-)
Sequence length	458

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

TTCTAATTCGGTCTCGAAAATGTCCTCAAAGACAGGTTGCGCAGCTTCAATCTAGCTTTTGAGGAGATTTTACAAAACTCAGACTGCATGGATAGTTCATGACACTCGGCTTCGGGAAGACCTGCGAATCTCAACGTCGCTCAGGGTGATCCATGCTTATAGAGCATTTTTTGGAAGATGTAATAATCATGTAAGTGACAAGCTTATTAAGTACACTCCAGATGATTTGGAAGGTTACCTTCTTGATCTCTTTGAGGGATCTCCAAAATCATTGGCCAACACCAACCGCAGGTCACTTCCAAAATGAGAAATCTAAAAACCTTTTGTTGTTTTCACTGCAAAAACCTCCCAACTTCTTTCTGTTCACTTTACTTTTAAGTTTTGGATCGCATCCATATCCATCTTTGTAACTGTTGATCTATCTTATTATTATAATAAAGTAAAGATTAATTTTTTCC

Library


Library category	ESTs
watermelon fruit 10d library	1
watermelon fruit 18d library	1
watermelon fruit 34d library	8

Homology

[Close]

BLAST of WMU30674 vs. TAIR10
Match: AT5G50380.1 (AT5G50380.1 exocyst subunit exo70 family protein F1)

HSP 1 Score: 85.5 bits (210), Expect = 3.1e-17
Identity = 50/103 (48.54%), Postives = 61/103 (59.22%), Query Frame = 2


Query: 2   SNSVSKMSSKTGCAASI*LLRRFYKTQTAWIVHDTRLREDLRISTSLRVIHAYRAFFGRC 61
           SN+ SKM+ K             Y+ QTAW V D +LRE+LRIS S +VI AYRAFFGR 
Sbjct: 581 SNNSSKMALKERFRGFNASFEELYRLQTAWKVPDPQLREELRISISEKVIPAYRAFFGRN 640

Query: 62  NNHV-----SDKLIKYTPDDLEGYLLDLFEGSPKSLANTNRRS 121
            + +     + K IKYTPDDLE YL DLFEG+   + +  R+S
Sbjct: 641 RSQLEGGRHAGKYIKYTPDDLESYLPDLFEGNQLVIHHPRRKS 683

Query: 122  181
           
Sbjct: 701  683

Query: 182  241
           
Sbjct: 761  683

Query: 242  296
           
Sbjct: 821  683

[Close]

BLAST of WMU30674 vs. TAIR10
Match: AT3G29400.1 (AT3G29400.1 exocyst subunit exo70 family protein E1)

HSP 1 Score: 83.6 bits (205), Expect = 1.2e-16
Identity = 41/74 (55.41%), Postives = 49/74 (66.22%), Query Frame = 2


Query: 71  YKTQTAWIVHDTRLREDLRISTSLRVIHAYRAFFGRCNNHVSDKLIKYTPDDLEGYLLDL 130
           YK QT W++ D  LRED+R   S+ VI AY  F+ R  N VS++ IKYT DD+E  LLDL
Sbjct: 585 YKAQTGWLISDEGLREDVRTKASMWVIQAYWTFYSRHKNSVSERYIKYTTDDIERLLLDL 644

Query: 131 FEGSPKSLANTNRR 190
           F GS KSL N+ RR
Sbjct: 645 FAGSSKSLNNSYRR 658

Query: 191  250
           
Sbjct: 705  658

Query: 251  293
           
Sbjct: 765  658

[Close]

BLAST of WMU30674 vs. TAIR10
Match: AT5G13150.1 (AT5G13150.1 exocyst subunit exo70 family protein C1)

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14
Identity = 35/74 (47.30%), Postives = 51/74 (68.92%), Query Frame = 2


Query: 71  YKTQTAWIVHDTRLREDLRISTSLRVIHAYRAFFGRCNNHV-----SDKLIKYTPDDLEG 130
           +KTQ+ WIV D +++ +LR+S S  VI AYR+FFGR   H+     +DK +KY P+D+E 
Sbjct: 577 HKTQSTWIVSDEQMQSELRVSISSLVIPAYRSFFGRYKQHLDSGKQTDKYVKYQPEDIES 636

Query: 131 YLLDLFEGSPKSLA 190
           ++ DLF+G+P S+A
Sbjct: 637 FIDDLFDGNPTSMA 650

Query: 191  250
           
Sbjct: 697  650

Query: 251  278
           
Sbjct: 757  650

[Close]

BLAST of WMU30674 vs. TAIR10
Match: AT5G61010.1 (AT5G61010.1 exocyst subunit exo70 family protein E2)

HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14
Identity = 38/76 (50.00%), Postives = 51/76 (67.11%), Query Frame = 2


Query: 71  YKTQTAWIVHDTRLREDLRISTSLRVIHAYRAFFGRCNNHVSDKLIKYTPDDLEGYLLDL 130
           YK QT W V D+ LR+DL ISTS++V+ +YR F GR    + +K I+YT +D+E  LLDL
Sbjct: 564 YKNQTRWSVPDSELRDDLHISTSVKVVQSYRGFLGRNAVRIGEKHIRYTCEDIENMLLDL 623

Query: 131 FE--GSPKSLANTNRR 190
           FE   SP+SL ++ +R
Sbjct: 624 FECLPSPRSLRSSRKR 639

Query: 191  250
           
Sbjct: 684  639

Query: 251  293
           
Sbjct: 744  639

[Close]

BLAST of WMU30674 vs. TAIR10
Match: AT3G14090.1 (AT3G14090.1 exocyst subunit exo70 family protein D3)

HSP 1 Score: 64.3 bits (155), Expect = 7.4e-11
Identity = 34/91 (37.36%), Postives = 52/91 (57.14%), Query Frame = 2


Query: 2   SNSVSKMSSKTGCAASI*LLRRFYKTQTAWIVHDTRLREDLRISTSLRVIHAYRAFFGRC 61
           S+ VS+ + +    A   +    ++TQ+ W V D +LRE+LRIS S  +I AYR+F GR 
Sbjct: 523 SSGVSRSALRERFKAFNTMFEEVHRTQSTWSVPDAQLREELRISLSEHLIPAYRSFLGRF 582

Query: 62  NNHVS-----DKLIKYTPDDLEGYLLDLFEG 121
             H+      +  +KY+ +D+E  +LD FEG
Sbjct: 583 RGHIESGRHPENYLKYSVEDIETIVLDFFEG 613

Query: 122  181
           
Sbjct: 643  613

Query: 182  241
           
Sbjct: 703  613

Query: 242  260
           
Sbjct: 763  613

[Close]

BLAST of WMU30674 vs. TrEMBL
Match: A0A0A0KXV3_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_4G101790 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.1e-34
Identity = 76/97 (78.35%), Postives = 81/97 (83.51%), Query Frame = 2


Query: 2   SNSVSKMSSKTGCAASI*LLRRFYKTQTAWIVHDTRLREDLRISTSLRVIHAYRAFFGRC 61
           S SVSK   K    +        YKTQTAWI+HD+RLREDLRISTSLRVIHAYRAF+GRC
Sbjct: 563 STSVSKNVLKDRLRSFNLAFEEIYKTQTAWIIHDSRLREDLRISTSLRVIHAYRAFYGRC 622

Query: 62  NNHVSDKLIKYTPDDLEGYLLDLFEGSPKSLANTNRR 121
           NNHVSDKLIKYTPDDLEGYLLDLFEGSPKSLANT+RR
Sbjct: 623 NNHVSDKLIKYTPDDLEGYLLDLFEGSPKSLANTSRR 659

Query: 122  181
           
Sbjct: 683  659

Query: 182  241
           
Sbjct: 743  659

Query: 242  293
           
Sbjct: 803  659

[Close]

BLAST of WMU30674 vs. TrEMBL
Match: F6H486_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g00250 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.2e-22
Identity = 56/97 (57.73%), Postives = 72/97 (74.23%), Query Frame = 2


Query: 2   SNSVSKMSSKTGCAASI*LLRRFYKTQTAWIVHDTRLREDLRISTSLRVIHAYRAFFGRC 61
           SNS SK   K    +        YK+QTAW++ D++LR++L+ISTSL+V+ AYR F GR 
Sbjct: 556 SNSPSKTVLKDRLRSFNVAFEELYKSQTAWLIPDSQLRDELQISTSLKVVQAYRTFVGRH 615

Query: 62  NNHVSDKLIKYTPDDLEGYLLDLFEGSPKSLANTNRR 121
           N H+SDK IKY+PDDL+ +LLDLFEGSPKSL NT+RR
Sbjct: 616 NPHISDKHIKYSPDDLQNFLLDLFEGSPKSLPNTHRR 652

Query: 122  181
           
Sbjct: 676  652

Query: 182  241
           
Sbjct: 736  652

Query: 242  293
           
Sbjct: 796  652

[Close]

BLAST of WMU30674 vs. TrEMBL
Match: W9QIQ6_9ROSA (Exocyst complex component 7 OS=Morus notabilis GN=L484_021023 PE=4 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.6e-22
Identity = 58/96 (60.42%), Postives = 68/96 (70.83%), Query Frame = 2


Query: 5   NSVSKMSSKTGCAASI*LLRRFYKTQTAWIVHDTRLREDLRISTSLRVIHAYRAFFGRCN 64
           NS+SK+  K    +        Y+TQTAWIV D  LREDLRISTSL+VI AYR F GR +
Sbjct: 564 NSISKIRLKERFRSFYLAFEEIYRTQTAWIVPDIELREDLRISTSLQVIQAYRTFAGRHS 623

Query: 65  NHVSDKLIKYTPDDLEGYLLDLFEGSPKSLANTNRR 124
            H++DK IKY+ DDLE +LLDLFEGSPKSL N  RR
Sbjct: 624 THINDKSIKYSADDLENFLLDLFEGSPKSLQNPGRR 659

Query: 125  184
           
Sbjct: 684  659

Query: 185  244
           
Sbjct: 744  659

Query: 245  293
           
Sbjct: 804  659

[Close]

BLAST of WMU30674 vs. TrEMBL
Match: A0A059AR15_EUCGR (Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_I02032 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.6e-22
Identity = 52/76 (68.42%), Postives = 62/76 (81.58%), Query Frame = 2


Query: 71  YKTQTAWIVHDTRLREDLRISTSLRVIHAYRAFFGRCNNHVSDKLIKYTPDDLEGYLLDL 130
           Y+ QTAW++ D +LREDLRISTSL+++ AYR F GR N H+SD+ IKYT DDLE Y+LDL
Sbjct: 578 YRAQTAWVIPDVQLREDLRISTSLKIVQAYRTFVGRHNGHLSDRHIKYTADDLENYILDL 637

Query: 131 FEGSPKSLANTNRRSL 190
           FEGSPKSL N  RRSL
Sbjct: 638 FEGSPKSLPNPYRRSL 653

Query: 191  250
           
Sbjct: 698  653

Query: 251  299
           
Sbjct: 758  653

[Close]

BLAST of WMU30674 vs. TrEMBL
Match: M1AX18_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400012380 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.0e-21
Identity = 53/97 (54.64%), Postives = 69/97 (71.13%), Query Frame = 2


Query: 2   SNSVSKMSSKTGCAASI*LLRRFYKTQTAWIVHDTRLREDLRISTSLRVIHAYRAFFGRC 61
           SNS+S+   K             YK+QT W++ D++LR+DLRISTSL+VI AYR F GR 
Sbjct: 563 SNSISRTLLKERLQCFYAAFDEVYKSQTGWLIQDSQLRDDLRISTSLKVIQAYRTFIGRH 622

Query: 62  NNHVSDKLIKYTPDDLEGYLLDLFEGSPKSLANTNRR 121
           +NH+SDK IKY PDD+E +LLDLFEGSP+SL  ++ R
Sbjct: 623 SNHISDKYIKYGPDDMENFLLDLFEGSPRSLHGSSHR 659

Query: 122  181
           
Sbjct: 683  659

Query: 182  241
           
Sbjct: 743  659

Query: 242  293
           
Sbjct: 803  659

[Close]

BLAST of WMU30674 vs. NCBI nr
Match: gi|778691866|ref|XP_011653366.1| (PREDICTED: exocyst complex component EXO70B1 [Cucumis sativus])

HSP 1 Score: 155.2 bits (391), Expect = 9.0e-35
Identity = 76/97 (78.35%), Postives = 81/97 (83.51%), Query Frame = 2


Query: 2   SNSVSKMSSKTGCAASI*LLRRFYKTQTAWIVHDTRLREDLRISTSLRVIHAYRAFFGRC 61
           S SVSK   K    +        YKTQTAWI+HD+RLREDLRISTSLRVIHAYRAF+GRC
Sbjct: 563 STSVSKNVLKDRLRSFNLAFEEIYKTQTAWIIHDSRLREDLRISTSLRVIHAYRAFYGRC 622

Query: 62  NNHVSDKLIKYTPDDLEGYLLDLFEGSPKSLANTNRR 121
           NNHVSDKLIKYTPDDLEGYLLDLFEGSPKSLANT+RR
Sbjct: 623 NNHVSDKLIKYTPDDLEGYLLDLFEGSPKSLANTSRR 659

Query: 122  181
           
Sbjct: 683  659

Query: 182  241
           
Sbjct: 743  659

Query: 242  293
           
Sbjct: 803  659

[Close]

BLAST of WMU30674 vs. NCBI nr
Match: gi|659125941|ref|XP_008462929.1| (PREDICTED: exocyst complex component EXO70B1 [Cucumis melo])

HSP 1 Score: 155.2 bits (391), Expect = 9.0e-35
Identity = 76/97 (78.35%), Postives = 81/97 (83.51%), Query Frame = 2


Query: 2   SNSVSKMSSKTGCAASI*LLRRFYKTQTAWIVHDTRLREDLRISTSLRVIHAYRAFFGRC 61
           S SVSK   K    +        YKTQTAWI+HD+RLREDLRISTSLRVIHAYRAF+GRC
Sbjct: 563 STSVSKNVLKDRLRSFNLAFEEIYKTQTAWIIHDSRLREDLRISTSLRVIHAYRAFYGRC 622

Query: 62  NNHVSDKLIKYTPDDLEGYLLDLFEGSPKSLANTNRR 121
           NNHVSDKLIKYTPDDLEGYLLDLFEGSPKSLANT+RR
Sbjct: 623 NNHVSDKLIKYTPDDLEGYLLDLFEGSPKSLANTSRR 659

Query: 122  181
           
Sbjct: 683  659

Query: 182  241
           
Sbjct: 743  659

Query: 242  293
           
Sbjct: 803  659

[Close]

BLAST of WMU30674 vs. NCBI nr
Match: gi|703073765|ref|XP_010089630.1| (Exocyst complex component 7 [Morus notabilis])

HSP 1 Score: 116.7 bits (291), Expect = 3.5e-23
Identity = 58/96 (60.42%), Postives = 68/96 (70.83%), Query Frame = 2


Query: 5   NSVSKMSSKTGCAASI*LLRRFYKTQTAWIVHDTRLREDLRISTSLRVIHAYRAFFGRCN 64
           NS+SK+  K    +        Y+TQTAWIV D  LREDLRISTSL+VI AYR F GR +
Sbjct: 564 NSISKIRLKERFRSFYLAFEEIYRTQTAWIVPDIELREDLRISTSLQVIQAYRTFAGRHS 623

Query: 65  NHVSDKLIKYTPDDLEGYLLDLFEGSPKSLANTNRR 124
            H++DK IKY+ DDLE +LLDLFEGSPKSL N  RR
Sbjct: 624 THINDKSIKYSADDLENFLLDLFEGSPKSLQNPGRR 659

Query: 125  184
           
Sbjct: 684  659

Query: 185  244
           
Sbjct: 744  659

Query: 245  293
           
Sbjct: 804  659

[Close]

BLAST of WMU30674 vs. NCBI nr
Match: gi|296082201|emb|CBI21206.3| (unnamed protein product [Vitis vinifera])

HSP 1 Score: 116.7 bits (291), Expect = 3.5e-23
Identity = 56/97 (57.73%), Postives = 72/97 (74.23%), Query Frame = 2


Query: 2   SNSVSKMSSKTGCAASI*LLRRFYKTQTAWIVHDTRLREDLRISTSLRVIHAYRAFFGRC 61
           SNS SK   K    +        YK+QTAW++ D++LR++L+ISTSL+V+ AYR F GR 
Sbjct: 324 SNSPSKTVLKDRLRSFNVAFEELYKSQTAWLIPDSQLRDELQISTSLKVVQAYRTFVGRH 383

Query: 62  NNHVSDKLIKYTPDDLEGYLLDLFEGSPKSLANTNRR 121
           N H+SDK IKY+PDDL+ +LLDLFEGSPKSL NT+RR
Sbjct: 384 NPHISDKHIKYSPDDLQNFLLDLFEGSPKSLPNTHRR 420

Query: 122  181
           
Sbjct: 444  420

Query: 182  241
           
Sbjct: 504  420

Query: 242  293
           
Sbjct: 564  420

[Close]

BLAST of WMU30674 vs. NCBI nr
Match: gi|731418242|ref|XP_010660602.1| (PREDICTED: exocyst complex component EXO70B1 [Vitis vinifera])

HSP 1 Score: 116.7 bits (291), Expect = 3.5e-23
Identity = 56/97 (57.73%), Postives = 72/97 (74.23%), Query Frame = 2


Query: 2   SNSVSKMSSKTGCAASI*LLRRFYKTQTAWIVHDTRLREDLRISTSLRVIHAYRAFFGRC 61
           SNS SK   K    +        YK+QTAW++ D++LR++L+ISTSL+V+ AYR F GR 
Sbjct: 556 SNSPSKTVLKDRLRSFNVAFEELYKSQTAWLIPDSQLRDELQISTSLKVVQAYRTFVGRH 615

Query: 62  NNHVSDKLIKYTPDDLEGYLLDLFEGSPKSLANTNRR 121
           N H+SDK IKY+PDDL+ +LLDLFEGSPKSL NT+RR
Sbjct: 616 NPHISDKHIKYSPDDLQNFLLDLFEGSPKSLPNTHRR 652

Query: 122  181
           
Sbjct: 676  652

Query: 182  241
           
Sbjct: 736  652

Query: 242  293
           
Sbjct: 796  652

The following BLAST results are available for this feature:

BLAST of WMU30674 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G50380.1	3.1e-17	48.54	exocyst subunit exo70 family protein F1	[more]
AT3G29400.1	1.2e-16	55.41	exocyst subunit exo70 family protein E1	[more]
AT5G13150.1	1.1e-14	47.30	exocyst subunit exo70 family protein C1	[more]
AT5G61010.1	1.1e-14	50.00	exocyst subunit exo70 family protein E2	[more]
AT3G14090.1	7.4e-11	37.36	exocyst subunit exo70 family protein D3	[more]

BLAST of WMU30674 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KXV3_CUCSA	3.1e-34	78.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_4G101790 PE=4 SV=1	[more]
F6H486_VITVI	1.2e-22	57.73	Putative uncharacterized protein OS=Vitis vinifera GN=VIT_14s0068g00250 PE=4 SV=...	[more]
W9QIQ6_9ROSA	1.6e-22	60.42	Exocyst complex component 7 OS=Morus notabilis GN=L484_021023 PE=4 SV=1	[more]
A0A059AR15_EUCGR	3.6e-22	68.42	Uncharacterized protein (Fragment) OS=Eucalyptus grandis GN=EUGRSUZ_I02032 PE=4 ...	[more]
M1AX18_SOLTU	1.0e-21	54.64	Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400012380 PE=4 SV=1	[more]

BLAST of WMU30674 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778691866\|ref\|XP_011653366.1\|	9.0e-35	78.35	PREDICTED: exocyst complex component EXO70B1 [Cucumis sativus]	[more]
gi\|659125941\|ref\|XP_008462929.1\|	9.0e-35	78.35	PREDICTED: exocyst complex component EXO70B1 [Cucumis melo]	[more]
gi\|703073765\|ref\|XP_010089630.1\|	3.5e-23	60.42	Exocyst complex component 7 [Morus notabilis]	[more]
gi\|296082201\|emb\|CBI21206.3\|	3.5e-23	57.73	unnamed protein product [Vitis vinifera]	[more]
gi\|731418242\|ref\|XP_010660602.1\|	3.5e-23	57.73	PREDICTED: exocyst complex component EXO70B1 [Vitis vinifera]	[more]

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla010782	Cla010782	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S1_0147764	S1_0147764	EST
S2_0106366	S2_0106366	EST
S4_0014755	S4_0014755	EST
S4_0142806	S4_0142806	EST
S4_0142855	S4_0142855	EST
S4_0155039	S4_0155039	EST
S4_0155150	S4_0155150	EST
S4_0156500	S4_0156500	EST
S4_0158616	S4_0158616	EST
S4_0158760	S4_0158760	EST