WMU28312 (transcribed_cluster) Watermelon (97103) v1
The following sequences are available for this feature:
AATATGTATGCCTTGTGAATATCATTTTATTAATTGAAGCTTTCAATATTCTATTTCAGAAAATGATCAAATGATTGGGAAGAAAAACAGAAAAACAATCGAAAAACCGTCAGCTTCGAAGAATCGCAATTCAGTCCAGTCTAGACACTCACAATGTAAGATCATCGCGAGCCACAGTGGCAATGAGGATCCCATTTCCTCAAGGAGATCCAAGGAGACTGCTGATAGTAGATGTCAAACTGTTGGAAAGAATGGTACAGCCTACAGGGGCAGCAGCATCATGTCAAAGATGACTCCCTAAAAGCAAGAGACCAGTTCTTGGGCTGATGATTTTGGGCATGTTACCTTAAAATAGGCCAAATATATAACAATTGAGTCAAGTCTTGCGCTGGTTTTTAGTATCATTGTGGTGCTTTGTCTAATTGCTCAACAACCGATTCCTCGTTCATATCATAGCTTGGAATCAGCTTCCTCGCTAACATGAATTACTTTATATCCATGTGGCCTGAGATGTTTTGCACTTGAAAACTTGAGACGAATGAAGTTCTATTAACAGCCAGCAAAACTCTCCACTTACATTGCTATGAAACCAGTCTTGACATGGATTTTTCACCCCTCTGTTGTTTGCAACTTAGCTTCCTTCATTTTAGAATTCCATTTACCTCCAGATGCAACAACCTTACAACATAACAGATTCTATCAAAATGAGGATTTGAACGATCTCCAGAAAGAAAGATGTACCCACTATTGTTTACTTCAATCCAACTACACCCTGGTTGTTTCTTAACTCCATTGTTTTTCATTCTTGCCAAAATCCTTTCGGCATCTTCTCTTTTCCCATTTCTCAAATACATTTCTGCTAAAATCAA
BLAST of WMU28312 vs. TAIR10
Match: AT2G35030.1 (AT2G35030.1 Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 68.2 bits (165), Expect = 9.7e-12 Identity = 25/59 (42.37%), Postives = 43/59 (72.88%), Query Frame = -1
BLAST of WMU28312 vs. TAIR10
Match: AT3G23330.1 (AT3G23330.1 Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 62.0 bits (149), Expect = 6.9e-10 Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = -1
BLAST of WMU28312 vs. TAIR10
Match: AT2G03880.1 (AT2G03880.1 Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 60.1 bits (144), Expect = 2.6e-09 Identity = 27/72 (37.50%), Postives = 41/72 (56.94%), Query Frame = -1
BLAST of WMU28312 vs. TAIR10
Match: AT3G24000.1 (AT3G24000.1 Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 58.2 bits (139), Expect = 1.0e-08 Identity = 23/59 (38.98%), Postives = 37/59 (62.71%), Query Frame = -1
BLAST of WMU28312 vs. TAIR10
Match: AT1G20230.1 (AT1G20230.1 Pentatricopeptide repeat (PPR) superfamily protein) HSP 1 Score: 57.8 bits (138), Expect = 1.3e-08 Identity = 24/59 (40.68%), Postives = 37/59 (62.71%), Query Frame = -1
BLAST of WMU28312 vs. Swiss-Prot
Match: PP185_ARATH (Pentatricopeptide repeat-containing protein At2g35030, mitochondrial OS=Arabidopsis thaliana GN=PCMP-E15 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10 Identity = 25/59 (42.37%), Postives = 43/59 (72.88%), Query Frame = -1
BLAST of WMU28312 vs. Swiss-Prot
Match: PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 1.2e-08 Identity = 24/59 (40.68%), Postives = 39/59 (66.10%), Query Frame = -1
BLAST of WMU28312 vs. Swiss-Prot
Match: PP147_ARATH (Pentatricopeptide repeat-containing protein At2g03880, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2 SV=1) HSP 1 Score: 60.1 bits (144), Expect = 4.7e-08 Identity = 27/72 (37.50%), Postives = 41/72 (56.94%), Query Frame = -1
BLAST of WMU28312 vs. Swiss-Prot
Match: PP252_ARATH (Pentatricopeptide repeat-containing protein At3g24000, mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=3 SV=1) HSP 1 Score: 58.2 bits (139), Expect = 1.8e-07 Identity = 23/59 (38.98%), Postives = 37/59 (62.71%), Query Frame = -1
BLAST of WMU28312 vs. Swiss-Prot
Match: PP172_ARATH (Pentatricopeptide repeat-containing protein At2g27610 OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.3e-07 Identity = 26/59 (44.07%), Postives = 36/59 (61.02%), Query Frame = -1
BLAST of WMU28312 vs. TrEMBL
Match: A0A0A0L9N2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134600 PE=4 SV=1) HSP 1 Score: 136.3 bits (342), Expect = 5.7e-29 Identity = 63/74 (85.14%), Postives = 70/74 (94.59%), Query Frame = -1
BLAST of WMU28312 vs. TrEMBL
Match: A0A0A0L861_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G134610 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.4e-27 Identity = 64/83 (77.11%), Postives = 69/83 (83.13%), Query Frame = 2
BLAST of WMU28312 vs. TrEMBL
Match: F6H8P3_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_05s0049g01900 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.8e-20 Identity = 50/76 (65.79%), Postives = 62/76 (81.58%), Query Frame = -1
BLAST of WMU28312 vs. TrEMBL
Match: A0A067DL66_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006955mg PE=4 SV=1) HSP 1 Score: 101.3 bits (251), Expect = 2.0e-18 Identity = 44/70 (62.86%), Postives = 58/70 (82.86%), Query Frame = -1
BLAST of WMU28312 vs. TrEMBL
Match: V4U2W2_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10006438mg PE=4 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 3.5e-18 Identity = 44/70 (62.86%), Postives = 58/70 (82.86%), Query Frame = -1
BLAST of WMU28312 vs. NCBI nr
Match: gi|659076025|ref|XP_008438460.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like isoform X1 [Cucumis melo]) HSP 1 Score: 141.7 bits (356), Expect = 2.0e-30 Identity = 66/74 (89.19%), Postives = 70/74 (94.59%), Query Frame = -1
BLAST of WMU28312 vs. NCBI nr
Match: gi|659076027|ref|XP_008438461.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like isoform X2 [Cucumis melo]) HSP 1 Score: 141.7 bits (356), Expect = 2.0e-30 Identity = 66/74 (89.19%), Postives = 70/74 (94.59%), Query Frame = -1
BLAST of WMU28312 vs. NCBI nr
Match: gi|449433223|ref|XP_004134397.1| (PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Cucumis sativus]) HSP 1 Score: 137.9 bits (346), Expect = 2.8e-29 Identity = 63/74 (85.14%), Postives = 70/74 (94.59%), Query Frame = -1
BLAST of WMU28312 vs. NCBI nr
Match: gi|449432504|ref|XP_004134039.1| (PREDICTED: uncharacterized protein LOC101203442 [Cucumis sativus]) HSP 1 Score: 124.4 bits (311), Expect = 3.2e-25 Identity = 64/83 (77.11%), Postives = 69/83 (83.13%), Query Frame = 2
BLAST of WMU28312 vs. NCBI nr
Match: gi|659076023|ref|XP_008438459.1| (PREDICTED: uncharacterized protein LOC103483545 [Cucumis melo]) HSP 1 Score: 122.1 bits (305), Expect = 1.6e-24 Identity = 62/83 (74.70%), Postives = 69/83 (83.13%), Query Frame = 2
The following BLAST results are available for this feature:
This transcribed_cluster is associated with the following gene feature(s):
The following EST feature(s) are a part of this transcribed_cluster:
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