WMU17044 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU17044
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionHaloacid dehalogenase-like hydrolase superfamily protein
LocationChr3 : 25460626 .. 25461001 (+)
Sequence length384
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

GGAGCAAGCGTGCTAATAGATGATAACCCAAGATACGCAATCGAATGTGCTGAAGCGGGGATTCGAGTTCTACTTTTCGACTATGAGAATTCATATCCAATGGTGCAAGACTGAATGTGAGGATCTGCCTCCCTTAGTCACTAAAGTTCACAATTGGGAAGAAGTGGAGAAGCAATTAGGTTCTTGTGTTCTTTCTTCTTAAATCAAATTAAGTTTTTAGCTAAAATAGAAAATGCTGTTTTATTTTTACTAATATGAAATGTGGGATTTTGTGGGTTGGAGGAGGTAGTAGGAACTAAGGAATATTGATGATGTAATTGTTTAAGGTTTAGCATTTAGGCCCCAAACTTTTCATTATCCCATAATTGAATTTTCCTCACTTTT
Homology
[Close]
BLAST of WMU17044 vs. TrEMBL
Match: A0A0A0LX27_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G598340 PE=4 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.4e-08
Identity = 28/30 (93.33%), Postives = 28/30 (93.33%), Query Frame = 2 

Query: 101 WCKTECEDLPPLVTKVHNWEEVEKQLGSCV 160
           WCKTEC DLPPLVTKVHNWEEVEKQL SCV
Sbjct: 316 WCKTECGDLPPLVTKVHNWEEVEKQLASCV 345

Query: 161  191
           
Sbjct: 376  345

[Close]
BLAST of WMU17044 vs. NCBI nr
Match: gi|778663259|ref|XP_011660045.1| (PREDICTED: uncharacterized protein LOC101215456 [Cucumis sativus])

HSP 1 Score: 68.2 bits (165), Expect = 1.2e-08
Identity = 28/30 (93.33%), Postives = 28/30 (93.33%), Query Frame = 2 

Query: 101 WCKTECEDLPPLVTKVHNWEEVEKQLGSCV 160
           WCKTEC DLPPLVTKVHNWEEVEKQL SCV
Sbjct: 316 WCKTECGDLPPLVTKVHNWEEVEKQLASCV 345

Query: 161  191
           
Sbjct: 376  345

[Close]
BLAST of WMU17044 vs. NCBI nr
Match: gi|659100214|ref|XP_008450985.1| (PREDICTED: uncharacterized protein LOC103492406 isoform X2 [Cucumis melo])

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-07
Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 2 

Query: 101 WCKTECEDLPPLVTKVHNWEEVEKQLGSCV 160
           WCKTEC +LPPLVTKVHNWEEVEK L SCV
Sbjct: 293 WCKTECGNLPPLVTKVHNWEEVEKHLASCV 322

Query: 161  191
           
Sbjct: 353  322

[Close]
BLAST of WMU17044 vs. NCBI nr
Match: gi|659100208|ref|XP_008450982.1| (PREDICTED: uncharacterized protein LOC103492406 isoform X1 [Cucumis melo])

HSP 1 Score: 64.3 bits (155), Expect = 1.7e-07
Identity = 26/30 (86.67%), Postives = 27/30 (90.00%), Query Frame = 2 

Query: 101 WCKTECEDLPPLVTKVHNWEEVEKQLGSCV 160
           WCKTEC +LPPLVTKVHNWEEVEK L SCV
Sbjct: 298 WCKTECGNLPPLVTKVHNWEEVEKHLASCV 327

Query: 161  191
           
Sbjct: 358  327

The following BLAST results are available for this feature:
BLAST of WMU17044 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LX27_CUCSA1.4e-0893.33Uncharacterized protein OS=Cucumis sativus GN=Csa_1G598340 PE=4 SV=1[more]
BLAST of WMU17044 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|778663259|ref|XP_011660045.1|1.2e-0893.33PREDICTED: uncharacterized protein LOC101215456 [Cucumis sativus][more]
gi|659100214|ref|XP_008450985.1|1.7e-0786.67PREDICTED: uncharacterized protein LOC103492406 isoform X2 [Cucumis melo][more]
gi|659100208|ref|XP_008450982.1|1.7e-0786.67PREDICTED: uncharacterized protein LOC103492406 isoform X1 [Cucumis melo][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla011125Cla011125gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0187483S2_0187483EST
S4_0057208S4_0057208EST
S4_0069632S4_0069632EST


InterPro
Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35134FAMILY NOT NAMEDcoord: 1..33
score: 8.0
NoneNo IPR availablePANTHERPTHR35134:SF2SUBFAMILY NOT NAMEDcoord: 1..33
score: 8.0