WMU16602 (transcribed_cluster) Watermelon (97103) v1

NameWMU16602
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr1 : 709715 .. 709835 (+)
Sequence length128
The following sequences are available for this feature:

transcribed_cluster sequence

AACCCAACGCCGAGTTCGTTCGCGAGCTGTTACTTCAGCGACTCGCCGACCAGTTTCAATCTCTCGTCGCCGCCGCTTTCCACCACCACCGCCGTCAGCTTCACGGCGACCTTCCCTTTCTGGACGGA
BLAST of WMU16602 vs. TrEMBL
Match: A0A0A0KK19_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G140530 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.5e-07
Identity = 34/40 (85.00%), Postives = 35/40 (87.50%), Query Frame = -1

Query: 3   QKGKVAVKLTAVVVESGGDERLKLVGESLK*QLANELGVG 62
           QKGKV VKLTAVV E+GGDE LKLVGESL  QLANELGVG
Sbjct: 361 QKGKVTVKLTAVVTENGGDESLKLVGESLT-QLANELGVG 399

Query: 63  122
           
Sbjct: 421 399

BLAST of WMU16602 vs. NCBI nr
Match: gi|659074287|ref|XP_008437524.1| (PREDICTED: scarecrow-like protein 8 [Cucumis melo])

HSP 1 Score: 62.8 bits (151), Expect = 1.7e-07
Identity = 34/40 (85.00%), Postives = 36/40 (90.00%), Query Frame = -1

Query: 3   QKGKVAVKLTAVVVESGGDERLKLVGESLK*QLANELGVG 62
           QKGKV VKLTAVV+E+GGDE LKLVGESL  QLANELGVG
Sbjct: 361 QKGKVTVKLTAVVMENGGDESLKLVGESLT-QLANELGVG 399

Query: 63  122
           
Sbjct: 421 399

BLAST of WMU16602 vs. NCBI nr
Match: gi|778699053|ref|XP_011654649.1| (PREDICTED: scarecrow-like protein 8 [Cucumis sativus])

HSP 1 Score: 62.4 bits (150), Expect = 2.2e-07
Identity = 34/40 (85.00%), Postives = 35/40 (87.50%), Query Frame = -1

Query: 3   QKGKVAVKLTAVVVESGGDERLKLVGESLK*QLANELGVG 62
           QKGKV VKLTAVV E+GGDE LKLVGESL  QLANELGVG
Sbjct: 361 QKGKVTVKLTAVVTENGGDESLKLVGESLT-QLANELGVG 399

Query: 63  122
           
Sbjct: 421 399

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KK19_CUCSA1.5e-0785.00Uncharacterized protein OS=Cucumis sativus GN=Csa_5G140530 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
gi|659074287|ref|XP_008437524.1|1.7e-0785.00PREDICTED: scarecrow-like protein 8 [Cucumis melo][more]
gi|778699053|ref|XP_011654649.1|2.2e-0785.00PREDICTED: scarecrow-like protein 8 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla004946Cla004946gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0005019S1_0005019EST
S1_0011889S1_0011889EST
S1_0015731S1_0015731EST
S1_0031659S1_0031659EST
S1_0045540S1_0045540EST
S1_0051849S1_0051849EST
S1_0063664S1_0063664EST
S1_0075768S1_0075768EST
S1_0087965S1_0087965EST
S1_0097439S1_0097439EST
S1_0099240S1_0099240EST
S1_0101302S1_0101302EST