WMU16438 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU16438
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	NADPH:quinone reductase
Location	Chr5 : 9496476 .. 9501632 (+)
Sequence length	1022

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

TTGCGTCTGTTGGTTCTTCGGTTCGTTCAGTTAGTGTTGGTACTAAGAAGTTTTGGTGCTTTGCATCCAACTGCCGTGAGGGGTACTTACACTGATTTAACGCAATACTTTCGGAAGATGAATTAAGTTGCTAAACCAGAATCATTGACACATGTGGAAGCAAGTGCCATTCCTTTTGCTGCACTGACCGCGTGGCGGGCTCTAAAAAGTACTGCTTAGAATCACTGAGGGGCAACGGGTATTAGTAATTGGCGGTGGAGGAGCTGTAGGTTATGCTGCAGTTCAACTTTCAGTTGCCTCAGGCTGCCATGTTACAACTACTTGTGGAAGTCAAAGTATAGATAAATTACTAGCAGCCGGTGCTGAACAAGCAGTTGACTATACTACTGAGGGCATTGAATTCAAAATAAAAGGGGAAATTTTGATGCTTTTTTTGGATACAATTGGCGTGCCAGATACGGAAAGAATTGGCATTCATCTTTTGAATAGAGGTGGACACTATATGACCCTTCAGGGCGAGGCTGCATCATTGACTGATAGATACGGATTAGTTATTGGGGCTTCCTTTTGCTACAAGTGTACTGTTGCAGAAACAGTTAAAAGTATAGATGGTCTCATGGAATTGAATATTGGTGGACATACATGAGGGCGGATTCCGAAGGTTTACATGAGATCAGGAGGCTATGTGAAGCTGAAAAGCTGAAGATACCGGTCGAGAAAACGTTTCCGATTACACAAGTAAGAGAGGCTCATGATGCAAAGGATAAGAACCTCATTCCTGGTAAAGTGGTGCTAGAGTTTGATTGATAAAAAAATACCTTTGTATATTACTTCATGTATTACTTTGATTTGTTTGGCTCACGTGCATTAAAATCCTGTAAATAATTTCCTCATCTCTTTAGCATCAAAAGTTGCTTTTGGAACTTTTACAGGATGTAGATTAACTGCAAAGTGGTATACCTTTTCTAGATTTTGCCAGATTAGAGAAAATGGAAAAAAAGTAAGAAGAGATTCTAAAATTT

Library


Library category	ESTs
watermelon fruit 18d library	1
watermelon fruit 26d library	1
watermelon fruit 34d library	2

Homology

[Close]

BLAST of WMU16438 vs. TAIR10
Match: AT3G15090.1 (AT3G15090.1 GroES-like zinc-binding alcohol dehydrogenase family protein)

HSP 1 Score: 138.3 bits (347), Expect = 9.0e-33
Identity = 71/114 (62.28%), Postives = 84/114 (73.68%), Query Frame = 2


Query: 218 RITEGQRVLXXXXXXXXXXXXXQLSVASGCHVTTTCGSQSIDKLLAAGAEQAVDYTTEGI 277
           RITEGQR+L             QL+VASGCHVT +C  Q+ D++LAAGAEQAVDYTTE I
Sbjct: 174 RITEGQRLLVFGGGGAVGFSAIQLAVASGCHVTASCVGQTKDRILAAGAEQAVDYTTEDI 233

Query: 278 EFKIKGEILMLFLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIG 337
           E  +KG+   + LDTIG P+TERIGI+ L +GG+YMTLQGEAASLTD+YG V+G
Sbjct: 234 ELAVKGKFDAV-LDTIGGPETERIGINFLRKGGNYMTLQGEAASLTDKYGFVVG 286

Query: 338  397
           
Sbjct: 294  286

Query: 398  457
           
Sbjct: 354  286

Query: 458  517
           
Sbjct: 414  286

Query: 518  560
           
Sbjct: 474  286

HSP 2 Score: 106.7 bits (265), Expect = 2.9e-23
Identity = 50/67 (74.63%), Postives = 55/67 (82.09%), Query Frame = 1


Query: 601 KYRWSHGIEYWWTYMRADSEGLHEIRRLCEAEKLKIPVEKTFPITQVREAHDAKDKNLIP 660
           +Y++SHGI+YWWTYMRAD EGL EI+RL  A KLKIPVEKTFPIT V  AH+AK+K  IP
Sbjct: 300 QYQYSHGIDYWWTYMRADPEGLAEIQRLVGAGKLKIPVEKTFPITDVVAAHEAKEKKQIP 359

Query: 661 GKVVLEF 720
           GKVVLEF
Sbjct: 360 GKVVLEF 366

Query: 721  780
           
Sbjct: 420  366

Query: 781  802
           
Sbjct: 480  366

HSP 3 Score: 73.2 bits (178), Expect = 3.5e-13
Identity = 38/55 (69.09%), Postives = 40/55 (72.73%), Query Frame = 1


Query: 52  FGALHPTAVRGTYTDLTQYFRKMN*VAKPESLTHVEASAIPFAALTAWRALKSTA 111
           FGALHPTA+RGTYTD      +     KP S++HVEASAIPFAALTAWRALKS A
Sbjct: 120 FGALHPTALRGTYTDYG-ILSEDELTEKPSSISHVEASAIPFAALTAWRALKSNA 173

Query: 112  171
           
Sbjct: 180  173

Query: 172  217
           
Sbjct: 240  173

[Close]

BLAST of WMU16438 vs. TrEMBL
Match: A0A0A0L6P2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G236570 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 4.5e-41
Identity = 93/121 (76.86%), Postives = 98/121 (80.99%), Query Frame = 2


Query: 206 KVLLRITEGQRVLXXXXXXXXXXXXXQLSVASGCHVTTTCGSQSIDKLLAAGAEQAVDYT 265
           K   RITEGQRVL             QLSVASGCHV TTCGSQSI+KLLAAGAEQAVDYT
Sbjct: 168 KSTARITEGQRVLVIGGGGAVGYAAVQLSVASGCHVATTCGSQSIEKLLAAGAEQAVDYT 227

Query: 266 TEGIEFKIKGEILMLFLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGAS 325
           TEGIEFKIKG+   + LDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYG+V+G  
Sbjct: 228 TEGIEFKIKGKFDAV-LDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGVVLGLP 287

Query: 326 F 385
           F
Sbjct: 288 F 287

Query: 386  445
           
Sbjct: 348  287

Query: 446  505
           
Sbjct: 408  287

Query: 506  565
           
Sbjct: 468  287

Query: 566  569
           
Sbjct: 528  287

[Close]

BLAST of WMU16438 vs. TrEMBL
Match: A0A0A0L6P2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G236570 PE=4 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 2.1e-30
Identity = 66/68 (97.06%), Postives = 67/68 (98.53%), Query Frame = 1


Query: 601 KYRWSHGIEYWWTYMRADSEGLHEIRRLCEAEKLKIPVEKTFPITQVREAHDAKDKNLIP 660
           KYR+SHGIEYWWTYMRADSEGL EIRRLCEAEKLKIPVEKTFPITQVREAHDAKDKNLIP
Sbjct: 298 KYRFSHGIEYWWTYMRADSEGLEEIRRLCEAEKLKIPVEKTFPITQVREAHDAKDKNLIP 357

Query: 661 GKVVLEFD 720
           GKVVLEFD
Sbjct: 358 GKVVLEFD 365

Query: 721  780
           
Sbjct: 418  365

Query: 781  805
           
Sbjct: 478  365

HSP 2 Score: 75.1 bits (183), Expect = 1.8e-10
Identity = 40/55 (72.73%), Postives = 42/55 (76.36%), Query Frame = 1


Query: 52  FGALHPTAVRGTYTDLTQYFRKMN*VAKPESLTHVEASAIPFAALTAWRALKSTA 111
           FGALHPTAVRGTY D      +    AKP S +HVEASAIPFAALTAWRALKSTA
Sbjct: 118 FGALHPTAVRGTYADYA-ILSEEELSAKPVSFSHVEASAIPFAALTAWRALKSTA 171

Query: 112  171
           
Sbjct: 178  171

Query: 172  217
           
Sbjct: 238  171

HSP 3 Score: 149.8 bits (377), Expect = 5.9e-33
Identity = 79/118 (66.95%), Postives = 92/118 (77.97%), Query Frame = 2


Query: 206 KVLLRITEGQRVLXXXXXXXXXXXXXQLSVASGCHVTTTCGSQSIDKLLAAGAEQAVDYT 265
           K   RITEGQR+L             Q++VA+GCHVTTTCG+QSI++L+AAGAEQAVDYT
Sbjct: 169 KSTARITEGQRLLVIGGGGAVGFSAIQIAVAAGCHVTTTCGNQSINRLMAAGAEQAVDYT 228

Query: 266 TEGIEFKIKGEILMLFLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIG 325
           +E IE  IK E     LDTIGVP+TERIGI+LLNRGGHYMTLQGEAA+L+DRYGL IG
Sbjct: 229 SEDIESVIK-EKFDAVLDTIGVPETERIGINLLNRGGHYMTLQGEAAALSDRYGLPIG 285

Query: 326  385
           
Sbjct: 289  285

Query: 386  445
           
Sbjct: 349  285

Query: 446  505
           
Sbjct: 409  285

Query: 506  560
           
Sbjct: 469  285

[Close]

BLAST of WMU16438 vs. TrEMBL
Match: A0A0B0MA97_GOSAR (Reticulon-4-interacting 1, mitochondrial OS=Gossypium arboreum GN=F383_16919 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 5.2e-21
Identity = 54/68 (79.41%), Postives = 58/68 (85.29%), Query Frame = 1


Query: 601 KYRWSHGIEYWWTYMRADSEGLHEIRRLCEAEKLKIPVEKTFPITQVREAHDAKDKNLIP 660
           +Y++SHGIEY W YMRADSEGLHEIRRL EA KL IPVEKTF ITQVREAH+AKDK  I 
Sbjct: 299 QYKFSHGIEYSWIYMRADSEGLHEIRRLSEAGKLSIPVEKTFSITQVREAHEAKDKKQIL 358

Query: 661 GKVVLEFD 720
           GKVVLE D
Sbjct: 359 GKVVLELD 366

Query: 721  780
           
Sbjct: 419  366

Query: 781  805
           
Sbjct: 479  366

HSP 2 Score: 77.0 bits (188), Expect = 4.8e-11
Identity = 41/55 (74.55%), Postives = 43/55 (78.18%), Query Frame = 1


Query: 52  FGALHPTAVRGTYTDLTQYFRKMN*VAKPESLTHVEASAIPFAALTAWRALKSTA 111
           FGALHPTA+RGTYTD      +     KP SLTHVEASAIPFAALTAWRALKSTA
Sbjct: 119 FGALHPTALRGTYTDYA-ILTEDELSPKPASLTHVEASAIPFAALTAWRALKSTA 172

Query: 112  171
           
Sbjct: 179  172

Query: 172  217
           
Sbjct: 239  172

HSP 3 Score: 149.8 bits (377), Expect = 5.9e-33
Identity = 79/118 (66.95%), Postives = 91/118 (77.12%), Query Frame = 2


Query: 206 KVLLRITEGQRVLXXXXXXXXXXXXXQLSVASGCHVTTTCGSQSIDKLLAAGAEQAVDYT 265
           K   RITEGQR+L             Q++VA+GCHVTTTCG+QSI +L+AAGAEQAVDYT
Sbjct: 169 KCTARITEGQRLLVIGGGGAVGFSAIQIAVAAGCHVTTTCGNQSISRLIAAGAEQAVDYT 228

Query: 266 TEGIEFKIKGEILMLFLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIG 325
           +E IE  IK E     LDTIGVP+TERIGI+LLNRGGHYMTLQGEAA+L+DRYGL IG
Sbjct: 229 SEDIESVIK-EKFDAVLDTIGVPETERIGINLLNRGGHYMTLQGEAAALSDRYGLPIG 285

Query: 326  385
           
Sbjct: 289  285

Query: 386  445
           
Sbjct: 349  285

Query: 446  505
           
Sbjct: 409  285

Query: 506  560
           
Sbjct: 469  285

[Close]

BLAST of WMU16438 vs. TrEMBL
Match: A0A0D2Q1P4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_002G066100 PE=4 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 4.4e-20
Identity = 53/66 (80.30%), Postives = 56/66 (84.85%), Query Frame = 1


Query: 607 RWSHGIEYWWTYMRADSEGLHEIRRLCEAEKLKIPVEKTFPITQVREAHDAKDKNLIPGK 666
           ++SHGIEY W YMRADSEGLHEIRRL EA KL IPVEKTF ITQVREAH+AKDK  I GK
Sbjct: 301 KFSHGIEYSWIYMRADSEGLHEIRRLSEAGKLSIPVEKTFSITQVREAHEAKDKKQILGK 360

Query: 667 VVLEFD 726
           VVLE D
Sbjct: 361 VVLELD 366

Query: 727  786
           
Sbjct: 421  366

Query: 787  805
           
Sbjct: 481  366

HSP 2 Score: 75.1 bits (183), Expect = 1.8e-10
Identity = 40/55 (72.73%), Postives = 42/55 (76.36%), Query Frame = 1


Query: 52  FGALHPTAVRGTYTDLTQYFRKMN*VAKPESLTHVEASAIPFAALTAWRALKSTA 111
           FGALHPTA+RGTYTD      +     KP SLTHVEASAIPFAALTAWRALK TA
Sbjct: 119 FGALHPTALRGTYTDYA-ILTEDELSPKPASLTHVEASAIPFAALTAWRALKCTA 172

Query: 112  171
           
Sbjct: 179  172

Query: 172  217
           
Sbjct: 239  172

HSP 3 Score: 148.3 bits (373), Expect = 1.7e-32
Identity = 77/118 (65.25%), Postives = 92/118 (77.97%), Query Frame = 2


Query: 206 KVLLRITEGQRVLXXXXXXXXXXXXXQLSVASGCHVTTTCGSQSIDKLLAAGAEQAVDYT 265
           K   RIT+GQR+L             QL+VA+GCHVTTTCG+QSI++++AAGAEQAVDYT
Sbjct: 169 KSTARITDGQRLLVVGGGGAVGFAAIQLAVAAGCHVTTTCGNQSINRVMAAGAEQAVDYT 228

Query: 266 TEGIEFKIKGEILMLFLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIG 325
            E IE  IKG+   + LDTIGVP+TERI I+LLNRGGHYMTLQGEAA+L+DRYGL IG
Sbjct: 229 AEDIEVVIKGKFDAV-LDTIGVPETERISINLLNRGGHYMTLQGEAAALSDRYGLPIG 285

Query: 326  385
           
Sbjct: 289  285

Query: 386  445
           
Sbjct: 349  285

Query: 446  505
           
Sbjct: 409  285

Query: 506  560
           
Sbjct: 469  285

[Close]

BLAST of WMU16438 vs. TrEMBL
Match: A0A061F8D9_THECC (GroES-like zinc-binding alcohol dehydrogenase family protein OS=Theobroma cacao GN=TCM_046874 PE=4 SV=1)

HSP 1 Score: 110.2 bits (274), Expect = 5.2e-21
Identity = 54/68 (79.41%), Postives = 58/68 (85.29%), Query Frame = 1


Query: 601 KYRWSHGIEYWWTYMRADSEGLHEIRRLCEAEKLKIPVEKTFPITQVREAHDAKDKNLIP 660
           +Y++SHGIEY W YMRADSEGLHEIRRL EA KL IPVEKTF ITQVREAH+AKDK  I 
Sbjct: 299 QYQYSHGIEYSWIYMRADSEGLHEIRRLSEAGKLNIPVEKTFSITQVREAHEAKDKKKIL 358

Query: 661 GKVVLEFD 720
           GKVVLE D
Sbjct: 359 GKVVLELD 366

Query: 721  780
           
Sbjct: 419  366

Query: 781  805
           
Sbjct: 479  366

HSP 2 Score: 75.5 bits (184), Expect = 1.4e-10
Identity = 40/55 (72.73%), Postives = 42/55 (76.36%), Query Frame = 1


Query: 52  FGALHPTAVRGTYTDLTQYFRKMN*VAKPESLTHVEASAIPFAALTAWRALKSTA 111
           FGALHPTAVRGTY D      +     KP S+THVEASAIPFAALTAWRALKSTA
Sbjct: 119 FGALHPTAVRGTYADYA-ILSEEELSPKPTSVTHVEASAIPFAALTAWRALKSTA 172

Query: 112  171
           
Sbjct: 179  172

Query: 172  217
           
Sbjct: 239  172

HSP 3 Score: 147.5 bits (371), Expect = 2.9e-32
Identity = 78/118 (66.10%), Postives = 86/118 (72.88%), Query Frame = 2


Query: 206 KVLLRITEGQRVLXXXXXXXXXXXXXQLSVASGCHVTTTCGSQSIDKLLAAGAEQAVDYT 265
           K   RITEGQR+L             QL+ A+ CHVTTTCG QSID++L AGAEQAVDYT
Sbjct: 170 KSTARITEGQRILVVGGGGAVGLAAIQLAAAARCHVTTTCGGQSIDRVLEAGAEQAVDYT 229

Query: 266 TEGIEFKIKGEILMLFLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIG 325
            E IE  IKG+   + LDTIGVP+TERIGI  L RGGHYMTLQGEAASLTDRYGLV G
Sbjct: 230 AEDIELAIKGKFDAV-LDTIGVPETERIGIKFLKRGGHYMTLQGEAASLTDRYGLVAG 286

Query: 326  385
           
Sbjct: 290  286

Query: 386  445
           
Sbjct: 350  286

Query: 446  505
           
Sbjct: 410  286

Query: 506  560
           
Sbjct: 470  286

[Close]

BLAST of WMU16438 vs. NCBI nr
Match: gi|778680365|ref|XP_011651297.1| (PREDICTED: reticulon-4-interacting protein 1, mitochondrial [Cucumis sativus])

HSP 1 Score: 179.1 bits (453), Expect = 1.3e-41
Identity = 93/121 (76.86%), Postives = 98/121 (80.99%), Query Frame = 2


Query: 206 KVLLRITEGQRVLXXXXXXXXXXXXXQLSVASGCHVTTTCGSQSIDKLLAAGAEQAVDYT 265
           K   RITEGQRVL             QLSVASGCHV TTCGSQSI+KLLAAGAEQAVDYT
Sbjct: 168 KSTARITEGQRVLVIGGGGAVGYAAVQLSVASGCHVATTCGSQSIEKLLAAGAEQAVDYT 227

Query: 266 TEGIEFKIKGEILMLFLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGAS 325
           TEGIEFKIKG+   + LDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYG+V+G  
Sbjct: 228 TEGIEFKIKGKFDAV-LDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGVVLGLP 287

Query: 326 F 385
           F
Sbjct: 288 F 287

Query: 386  445
           
Sbjct: 348  287

Query: 446  505
           
Sbjct: 408  287

Query: 506  565
           
Sbjct: 468  287

Query: 566  569
           
Sbjct: 528  287

[Close]

BLAST of WMU16438 vs. NCBI nr
Match: gi|659111995|ref|XP_008456012.1| (PREDICTED: reticulon-4-interacting protein 1, mitochondrial [Cucumis melo])

HSP 1 Score: 174.5 bits (441), Expect = 3.2e-40
Identity = 91/121 (75.21%), Postives = 97/121 (80.17%), Query Frame = 2


Query: 206 KVLLRITEGQRVLXXXXXXXXXXXXXQLSVASGCHVTTTCGSQSIDKLLAAGAEQAVDYT 265
           K   RI EGQRVL             QLSVASGCHV TTCGSQSI+KLLAAG+EQAVDYT
Sbjct: 168 KSTARIREGQRVLVIGGGGAVGYAAVQLSVASGCHVATTCGSQSIEKLLAAGSEQAVDYT 227

Query: 266 TEGIEFKIKGEILMLFLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIGAS 325
           TEGIEFKIKG+   + LDTIGVPDTERIGI+LLNRGGHYMTLQGEAASLTDRYGLV+G  
Sbjct: 228 TEGIEFKIKGKFDAV-LDTIGVPDTERIGIYLLNRGGHYMTLQGEAASLTDRYGLVLGLP 287

Query: 326 F 385
           F
Sbjct: 288 F 287

Query: 386  445
           
Sbjct: 348  287

Query: 446  505
           
Sbjct: 408  287

Query: 506  565
           
Sbjct: 468  287

Query: 566  569
           
Sbjct: 528  287

[Close]

BLAST of WMU16438 vs. NCBI nr
Match: gi|1009161907|ref|XP_015899148.1| (PREDICTED: reticulon-4-interacting protein 1, mitochondrial [Ziziphus jujuba])

HSP 1 Score: 152.1 bits (383), Expect = 1.7e-33
Identity = 78/118 (66.10%), Postives = 88/118 (74.58%), Query Frame = 2


Query: 206 KVLLRITEGQRVLXXXXXXXXXXXXXQLSVASGCHVTTTCGSQSIDKLLAAGAEQAVDYT 265
           K   RI +GQRVL             QL+VA+GCHVT TCGSQSIDK+LAAGAEQAVDY 
Sbjct: 174 KSTARIADGQRVLVVGGGGAVGFAAIQLAVAAGCHVTATCGSQSIDKILAAGAEQAVDYI 233

Query: 266 TEGIEFKIKGEILMLFLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIG 325
            E IE  IKG+   + LDTIGVP+TER+GI+ LNRGGHYMTLQGEAASL DRYGL +G
Sbjct: 234 VEDIELAIKGKFDAV-LDTIGVPETERVGINFLNRGGHYMTLQGEAASLADRYGLGVG 290

Query: 326  385
           
Sbjct: 294  290

Query: 386  445
           
Sbjct: 354  290

Query: 446  505
           
Sbjct: 414  290

Query: 506  560
           
Sbjct: 474  290

[Close]

BLAST of WMU16438 vs. NCBI nr
Match: gi|823131391|ref|XP_012457886.1| (PREDICTED: reticulon-4-interacting protein 1 homolog, mitochondrial [Gossypium raimondii])

HSP 1 Score: 151.8 bits (382), Expect = 2.2e-33
Identity = 79/118 (66.95%), Postives = 91/118 (77.12%), Query Frame = 2


Query: 206 KVLLRITEGQRVLXXXXXXXXXXXXXQLSVASGCHVTTTCGSQSIDKLLAAGAEQAVDYT 265
           K   RITEGQR+L             Q++VA+GCHVTTTCG+QSI +L+AAGAEQAVDYT
Sbjct: 169 KCTARITEGQRLLVIGGGGAVGFSAIQIAVAAGCHVTTTCGNQSISRLIAAGAEQAVDYT 228

Query: 266 TEGIEFKIKGEILMLFLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIG 325
           +E IE  IK E     LDTIGVP+TERIGI+LLNRGGHYMTLQGEAA+L+DRYGL IG
Sbjct: 229 SEDIESVIK-EKFDAVLDTIGVPETERIGINLLNRGGHYMTLQGEAAALSDRYGLPIG 285

Query: 326  385
           
Sbjct: 289  285

Query: 386  445
           
Sbjct: 349  285

Query: 446  505
           
Sbjct: 409  285

Query: 506  560
           
Sbjct: 469  285

[Close]

BLAST of WMU16438 vs. NCBI nr
Match: gi|728809524|gb|KHF99067.1| (Reticulon-4-interacting 1, mitochondrial [Gossypium arboreum])

HSP 1 Score: 151.8 bits (382), Expect = 2.2e-33
Identity = 79/118 (66.95%), Postives = 92/118 (77.97%), Query Frame = 2


Query: 206 KVLLRITEGQRVLXXXXXXXXXXXXXQLSVASGCHVTTTCGSQSIDKLLAAGAEQAVDYT 265
           K   RITEGQR+L             Q++VA+GCHVTTTCG+QSI++L+AAGAEQAVDYT
Sbjct: 169 KSTARITEGQRLLVIGGGGAVGFSAIQIAVAAGCHVTTTCGNQSINRLMAAGAEQAVDYT 228

Query: 266 TEGIEFKIKGEILMLFLDTIGVPDTERIGIHLLNRGGHYMTLQGEAASLTDRYGLVIG 325
           +E IE  IK E     LDTIGVP+TERIGI+LLNRGGHYMTLQGEAA+L+DRYGL IG
Sbjct: 229 SEDIESVIK-EKFDAVLDTIGVPETERIGINLLNRGGHYMTLQGEAAALSDRYGLPIG 285

Query: 326  385
           
Sbjct: 289  285

Query: 386  445
           
Sbjct: 349  285

Query: 446  505
           
Sbjct: 409  285

Query: 506  560
           
Sbjct: 469  285

The following BLAST results are available for this feature:

BLAST of WMU16438 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G15090.1	9.0e-33	62.28	GroES-like zinc-binding alcohol dehydrogenase family protein	[more]

BLAST of WMU16438 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6P2_CUCSA	4.5e-41	76.86	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G236570 PE=4 SV=1	[more]
A0A0A0L6P2_CUCSA	2.1e-30	97.06	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G236570 PE=4 SV=1	[more]
A0A0B0MA97_GOSAR	5.2e-21	79.41	Reticulon-4-interacting 1, mitochondrial OS=Gossypium arboreum GN=F383_16919 PE=...	[more]
A0A0D2Q1P4_GOSRA	4.4e-20	80.30	Uncharacterized protein OS=Gossypium raimondii GN=B456_002G066100 PE=4 SV=1	[more]
A0A061F8D9_THECC	5.2e-21	79.41	GroES-like zinc-binding alcohol dehydrogenase family protein OS=Theobroma cacao ...	[more]

BLAST of WMU16438 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778680365\|ref\|XP_011651297.1\|	1.3e-41	76.86	PREDICTED: reticulon-4-interacting protein 1, mitochondrial [Cucumis sativus]	[more]
gi\|659111995\|ref\|XP_008456012.1\|	3.2e-40	75.21	PREDICTED: reticulon-4-interacting protein 1, mitochondrial [Cucumis melo]	[more]
gi\|1009161907\|ref\|XP_015899148.1\|	1.7e-33	66.10	PREDICTED: reticulon-4-interacting protein 1, mitochondrial [Ziziphus jujuba]	[more]
gi\|823131391\|ref\|XP_012457886.1\|	2.2e-33	66.95	PREDICTED: reticulon-4-interacting protein 1 homolog, mitochondrial [Gossypium r...	[more]
gi\|728809524\|gb\|KHF99067.1\|	2.2e-33	66.95	Reticulon-4-interacting 1, mitochondrial [Gossypium arboreum]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR002085	Alcohol dehydrogenase superfamily, zinc-type
IPR016040	NAD(P)-bd_dom
IPR020843	PKS_ER

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding
GO:0016491	oxidoreductase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0016491	oxidoreductase activity
molecular_function	GO:0008270	zinc ion binding

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla004284	Cla004284	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S2_0172345	S2_0172345	EST
S3_0156587	S3_0156587	EST
S4_0030773	S4_0030773	EST
S4_0079167	S4_0079167	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002085	Alcohol dehydrogenase superfamily, zinc-type	PANTHER	PTHR11695	ALCOHOL DEHYDROGENASE RELATED	coord: 22..268 score: 4.5
IPR016040	NAD(P)-binding domain	GENE3D	G3DSA:3.40.50.720		coord: 40..174 score: 1.0
IPR016040	NAD(P)-binding domain	unknown	SSF51735	NAD(P)-binding Rossmann-fold domains	coord: 49..239 score: 1.04
IPR020843	Polyketide synthase, enoylreductase domain	SMART	SM00829	PKS_ER_names_mod	coord: 4..265 score: 0.
None	No IPR available	PANTHER	PTHR11695:SF509	RETICULON-4-INTERACTING PROTEIN 1 HOMOLOG, MITOCHONDRIAL	coord: 22..268 score: 4.5
None	No IPR available	PFAM	PF13602	ADH_zinc_N_2	coord: 120..265 score: 4.6