WMU15045 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU15045
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown protein
Location	Chr3 : 18941794 .. 18943564 (+)
Sequence length	706

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AATCCTTCATCAGTCCAAGATACTGCCGAGAAACTTTTAACCATTTGGGATGGTCAAAATCACTTCTCCACCGCCAAGAGGTGGCACCCCCACGACATTCAATTTTCAAATTTACATCATCTGGATTAACTCCAAAGCGTTTTAACATTGGCAAGGTAGTAGACTGGAAAGTATCAACGGACGGATCCTTTGAATCATTTGTAATACCTTTCAGCTTAATGGAGAGGGGGTTTCCTACCAAACAAAGCAAGAAGAATCAATGGCTCAAGGAAATAGGCAATGGAGCGACTAAGACCACAATCGTAGACTCCAAATTTCTCCCACCCCATGACAATCCCCAGGCTTGTACTTCAAGATTGTGCCGGTCTCATTGATATCGATGAAGCAGTCATCGCAAAGCTTCTCCAATAAGTCGAGAAAGGATTTCTCGTGAGGTCGAAGACCTGGAGAGATCGTATTGGGTCGAATACCATAGATACGAACTGGAGTGCGGCTCAAGGTCGCCAGTACCAATTTTGTCTTAGAATTTGGCTTCCCTTTAATTCTTTGTACTTACTACTCTTCACCATTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCTTTTCTCTACGTTGATTCTTTGTACTTACTTACAGAGCAGTAGCGACGGCAACGTTGCGGCGGGGGCGGGCGGTTGAGAGTGATCCGTAATGGACCA

Library


Library category	ESTs
watermelon fruit 10d library	1
watermelon fruit 18d library	1
watermelon fruit 26d library	1

Homology

[Close]

BLAST of WMU15045 vs. TAIR10
Match: AT5G22100.1 (AT5G22100.1 RNA cyclase family protein)

HSP 1 Score: 79.0 bits (193), Expect = 4.5e-15
Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = -2


Query: 325 VQRIKGKPNSKTKLVLATLSRTPVRIYGIRPNTISPGLRPHEKSFLDLLEKLCDDCFIDI 384
           ++++KG  + + +L+L+TLS TP+ I  IR +   PGLRPHE + L LLE + DD  +DI
Sbjct: 4   MKKMKGSQSFRQRLLLSTLSSTPISIDEIRADETIPGLRPHEVNLLRLLEIVTDDAVVDI 63

Query: 385 NETGTILKYKPGDCHG 444
           NETGT LKYKPG   G
Sbjct: 64  NETGTRLKYKPGTIVG 79

Query: 445  504
           
Sbjct: 124  79

Query: 505  553
           
Sbjct: 184  79

HSP 2 Score: 71.2 bits (173), Expect = 9.3e-13
Identity = 44/85 (51.76%), Postives = 54/85 (63.53%), Query Frame = -1


Query: 83  GGRNLESTIVVLVAPLPISLSH*FFLLCLVG----NPLSIKLKGITNDSKDPSVDTFQST 142
           GG+NL     V    L  S+ +    L L+G     PLSI+LKGITND +D SVDTF+ST
Sbjct: 79  GGKNL-----VHSCSLSRSIGYYLEPLLLLGLFGKKPLSIRLKGITNDPRDASVDTFRST 138

Query: 143 TLPMLKRFGVNPDDVNLKIECRGGA 202
           TL ++KRFGV  +D+ LKIE RG A
Sbjct: 139 TLNIIKRFGVPAEDLELKIEARGVA 158

Query: 203  262
           
Sbjct: 199  158

Query: 263  322
           
Sbjct: 259  158

Query: 323  326
           
Sbjct: 319  158

HSP 3 Score: 46.2 bits (108), Expect = 3.2e-05
Identity = 21/37 (56.76%), Postives = 26/37 (70.27%), Query Frame = -3


Query: 228 GIVMGWEKFGVYDCGLSRSIAYFLEPLILLALFGRKP 287
           G ++G +   V+ C LSRSI Y+LEPL+LL LFG+KP
Sbjct: 75  GTIVGGKNL-VHSCSLSRSIGYYLEPLLLLGLFGKKP 110

Query: 288  339
           
Sbjct: 135  110

[Close]

BLAST of WMU15045 vs. Swiss-Prot
Match: RCL1_ARATH (Probable RNA 3'-terminal phosphate cyclase-like protein OS=Arabidopsis thaliana GN=At5g22100 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.9e-14
Identity = 39/76 (51.32%), Postives = 51/76 (67.11%), Query Frame = -2


Query: 325 VQRIKGKPNSKTKLVLATLSRTPVRIYGIRPNTISPGLRPHEKSFLDLLEKLCDDCFIDI 384
           ++++KG  + + +L+L+TLS TP+ I  IR +   PGLRPHE + L LLE + DD  +DI
Sbjct: 4   MKKMKGSQSFRQRLLLSTLSSTPISIDEIRADETIPGLRPHEVNLLRLLEIVTDDAVVDI 63

Query: 385 NETGTILKYKPGDCHG 444
           NETGT LKYKPG   G
Sbjct: 64  NETGTRLKYKPGTIVG 79

Query: 445  504
           
Sbjct: 124  79

Query: 505  553
           
Sbjct: 184  79

HSP 2 Score: 71.2 bits (173), Expect = 1.7e-11
Identity = 44/85 (51.76%), Postives = 54/85 (63.53%), Query Frame = -1


Query: 83  GGRNLESTIVVLVAPLPISLSH*FFLLCLVG----NPLSIKLKGITNDSKDPSVDTFQST 142
           GG+NL     V    L  S+ +    L L+G     PLSI+LKGITND +D SVDTF+ST
Sbjct: 79  GGKNL-----VHSCSLSRSIGYYLEPLLLLGLFGKKPLSIRLKGITNDPRDASVDTFRST 138

Query: 143 TLPMLKRFGVNPDDVNLKIECRGGA 202
           TL ++KRFGV  +D+ LKIE RG A
Sbjct: 139 TLNIIKRFGVPAEDLELKIEARGVA 158

Query: 203  262
           
Sbjct: 199  158

Query: 263  322
           
Sbjct: 259  158

Query: 323  326
           
Sbjct: 319  158

HSP 3 Score: 46.2 bits (108), Expect = 5.7e-04
Identity = 21/37 (56.76%), Postives = 26/37 (70.27%), Query Frame = -3


Query: 228 GIVMGWEKFGVYDCGLSRSIAYFLEPLILLALFGRKP 287
           G ++G +   V+ C LSRSI Y+LEPL+LL LFG+KP
Sbjct: 75  GTIVGGKNL-VHSCSLSRSIGYYLEPLLLLGLFGKKP 110

Query: 288  339
           
Sbjct: 135  110

[Close]

BLAST of WMU15045 vs. Swiss-Prot
Match: RCL1_SCHPO (Probable RNA 3'-terminal phosphate cyclase-like protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC12G12.06c PE=3 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.8e-10
Identity = 35/76 (46.05%), Postives = 48/76 (63.16%), Query Frame = -2


Query: 325 VQRIKGKPNSKTKLVLATLSRTPVRIYGIRPNTISPGLRPHEKSFLDLLEKLCDDCFIDI 384
           ++R KG      +LVLATLS TP+R+ GI P+   PG++ ++ SFL LLEKL +   I+I
Sbjct: 6   LKRFKGCEYLTHRLVLATLSGTPIRVEGIYPDEADPGVKDYQVSFLRLLEKLTNGSVIEI 65

Query: 385 NETGTILKYKPGDCHG 444
           + TGT   Y+PG+  G
Sbjct: 66  SYTGTSFIYRPGNIIG 81

Query: 445  504
           
Sbjct: 126  81

Query: 505  553
           
Sbjct: 186  81

HSP 2 Score: 36.2 bits (82), Expect = 5.9e-01
Identity = 13/27 (48.15%), Postives = 18/27 (66.67%), Query Frame = -3


Query: 228 VYDCGLSRSIAYFLEPLILLALFGRKP 287
           V+DC  ++ I YFLEP+++L LF + P
Sbjct: 85  VHDCPTTKGIGYFLEPILILCLFAKTP 111

Query: 288  309
           
Sbjct: 145  111

[Close]

BLAST of WMU15045 vs. Swiss-Prot
Match: RCL1_HUMAN (RNA 3'-terminal phosphate cyclase-like protein OS=Homo sapiens GN=RCL1 PE=1 SV=3)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-08
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = -2


Query: 325 KTKLVLATLSRTPVRIYGIRPNTISPGLRPHEKSFLDLLEKLCDDCFIDINETGTILKYK 384
           + +LVL+TLS  PV+I  IR    +PGLR  E SF+ LL+K+ +   I+IN+TGT L Y+
Sbjct: 17  RQRLVLSTLSGRPVKIRKIRARDDNPGLRDFEASFIRLLDKITNGSRIEINQTGTTLYYQ 76

Query: 385 PGDCHG 444
           PG  +G
Sbjct: 77  PGLLYG 82

Query: 445  504
           
Sbjct: 137  82

Query: 505  523
           
Sbjct: 197  82

HSP 2 Score: 58.9 bits (141), Expect = 8.5e-08
Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = -1


Query: 89  LLCL---VGNPLSIKLKGITNDSKDPSVDTFQSTTLPMLKRFGVNPDDVNLKIECRG 148
           LLCL   + +PL I L+G+TND  DPSVD  ++T LP+LK+FG++ +   LKI  RG
Sbjct: 102 LLCLAPFMKHPLKIVLRGVTNDQVDPSVDVLKATALPLLKQFGIDGESFELKIVRRG 158

Query: 149  208
           
Sbjct: 162  158

Query: 209  251
           
Sbjct: 222  158

[Close]

BLAST of WMU15045 vs. Swiss-Prot
Match: RCL1_MOUSE (RNA 3'-terminal phosphate cyclase-like protein OS=Mus musculus GN=Rcl1 PE=2 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.0e-08
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = -2


Query: 325 KTKLVLATLSRTPVRIYGIRPNTISPGLRPHEKSFLDLLEKLCDDCFIDINETGTILKYK 384
           + +LVL+TLS  PV+I  IR    +PGLR  E SF+ LL+K+ +   I+IN+TGT L Y+
Sbjct: 17  RQRLVLSTLSGRPVKIRRIRARDDNPGLRDFEASFIRLLDKITNGSRIEINQTGTTLYYQ 76

Query: 385 PGDCHG 444
           PG  +G
Sbjct: 77  PGLLYG 82

Query: 445  504
           
Sbjct: 137  82

Query: 505  523
           
Sbjct: 197  82

HSP 2 Score: 58.5 bits (140), Expect = 1.1e-07
Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = -1


Query: 89  LLCL---VGNPLSIKLKGITNDSKDPSVDTFQSTTLPMLKRFGVNPDDVNLKIECRG 148
           LLCL   + +PL I L+G+TND  DPSVD  ++T LP+LK+FG++ +   LKI  RG
Sbjct: 102 LLCLAPFMKHPLKIVLRGVTNDQVDPSVDVLKATALPLLKQFGIDGESFELKILRRG 158

Query: 149  208
           
Sbjct: 162  158

Query: 209  251
           
Sbjct: 222  158

[Close]

BLAST of WMU15045 vs. Swiss-Prot
Match: RCL1_BOVIN (RNA 3'-terminal phosphate cyclase-like protein OS=Bos taurus GN=RCL1 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08
Identity = 32/66 (48.48%), Postives = 43/66 (65.15%), Query Frame = -2


Query: 325 KTKLVLATLSRTPVRIYGIRPNTISPGLRPHEKSFLDLLEKLCDDCFIDINETGTILKYK 384
           + +LVL+TLS  PV+I  IR    +PGLR  E SF+ LL+K+ +   I+IN+TGT L Y+
Sbjct: 17  RQRLVLSTLSGRPVKIRKIRARDDNPGLRDFEASFIRLLDKVTNGSRIEINQTGTTLYYQ 76

Query: 385 PGDCHG 444
           PG  +G
Sbjct: 77  PGLLYG 82

Query: 445  504
           
Sbjct: 137  82

Query: 505  523
           
Sbjct: 197  82

HSP 2 Score: 58.2 bits (139), Expect = 1.4e-07
Identity = 28/57 (49.12%), Postives = 39/57 (68.42%), Query Frame = -1


Query: 89  LLCL---VGNPLSIKLKGITNDSKDPSVDTFQSTTLPMLKRFGVNPDDVNLKIECRG 148
           LLCL   + +PL I L+G+TND  DPSVD  ++T LP+LK+FG++ +   LK+  RG
Sbjct: 102 LLCLAPFMKHPLRIVLRGVTNDQVDPSVDVLKATALPLLKQFGIDGESFELKVVRRG 158

Query: 149  208
           
Sbjct: 162  158

Query: 209  251
           
Sbjct: 222  158

[Close]

BLAST of WMU15045 vs. TrEMBL
Match: A0A0A0LXL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G633410 PE=4 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 3.8e-23
Identity = 55/71 (77.46%), Postives = 62/71 (87.32%), Query Frame = -2


Query: 337 QRIKGKPNSKTKLVLATLSRTPVRIYGIRPNTISPGLRPHEKSFLDLLEKLCDDCFIDIN 396
           + ++G    +  LVLATLSRTPVRI+ IRPNTISPGLRP+EKS LDLLEK+CDDCFIDIN
Sbjct: 7   KELRGSQILRQNLVLATLSRTPVRIHDIRPNTISPGLRPYEKSLLDLLEKICDDCFIDIN 66

Query: 397 ETGTILKYKPG 456
           ETGTILKYKPG
Sbjct: 67  ETGTILKYKPG 77

Query: 457  516
           
Sbjct: 127  77

Query: 517  550
           
Sbjct: 187  77

[Close]

BLAST of WMU15045 vs. TrEMBL
Match: A0A0A0LXL4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G633410 PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 2.8e-18
Identity = 59/90 (65.56%), Postives = 63/90 (70.00%), Query Frame = -1


Query: 89  GLSWGGRNLES------TIVVLVAPLPISLSH*FFLLCLVG-NPLSIKLKGITNDSKDPS 148
           G+  GG+NLE       +I   + PL         LL L G  PLSIKLKGITNDSKDPS
Sbjct: 77  GIVMGGKNLEHDCGLTRSIGYFLEPL--------ILLALFGSKPLSIKLKGITNDSKDPS 136

Query: 149 VDTFQSTTLPMLKRFGVNPDDVNLKIECRG 208
           VDTFQSTTLPMLKRFGVNPDDVNLKIE RG
Sbjct: 137 VDTFQSTTLPMLKRFGVNPDDVNLKIESRG 158

Query: 209  268
           
Sbjct: 197  158

Query: 269  328
           
Sbjct: 257  158

Query: 329  338
           
Sbjct: 317  158

HSP 2 Score: 65.9 bits (159), Expect = 7.7e-08
Identity = 47/121 (38.84%), Postives = 62/121 (51.24%), Query Frame = -3


Query: 228 SKYKELKGSQILRQNWYWRP*AALQFVSMVFDPIRSLQVFDLTRNPFSTYWRSFAMTASS 287
           +KYKEL+GSQILRQN        L   ++   P+R   + D+  N  S   R +  +   
Sbjct: 4   TKYKELRGSQILRQN--------LVLATLSRTPVR---IHDIRPNTISPGLRPYEKSLLD 63

Query: 288 ISMRPAQS*STSL-----------GIVMGWEKFGVYDCGLSRSIAYFLEPLILLALFGRK 347
           +  +        +           GIVMG +    +DCGL+RSI YFLEPLILLALFG K
Sbjct: 64  LLEKICDDCFIDINETGTILKYKPGIVMGGKNLE-HDCGLTRSIGYFLEPLILLALFGSK 112

Query: 348 P 407
           P
Sbjct: 124 P 112

Query: 408  467
           
Sbjct: 184  112

Query: 468  527
           
Sbjct: 244  112

Query: 528  558
           
Sbjct: 304  112

HSP 3 Score: 30.8 bits (68), Expect = 2.7e+03
Identity = 13/13 (100.00%), Postives = 13/13 (100.00%), Query Frame = -3


Query: 3   VKSFSAVSWTDEG 42
           VKSFSAVSWTDEG
Sbjct: 174 VKSFSAVSWTDEG 186

HSP 4 Score: 90.5 bits (223), Expect = 2.9e-15
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = -2


Query: 337 RIKGKPNSKTKLVLATLSRTPVRIYGIRPNTISPGLRPHEKSFLDLLEKLCDDCFIDINE 396
           R +G  N + +L+L+TLS TP+ I  IR N   PGLRPHE S L LLEK+CDDC ++INE
Sbjct: 8   RFQGSQNLRLRLLLSTLSSTPILIDQIRSNETIPGLRPHEVSLLRLLEKVCDDCHVEINE 67

Query: 397 TGTILKYKPG 456
           TGT LKYKPG
Sbjct: 68  TGTKLKYKPG 77

Query: 457  516
           
Sbjct: 128  77

Query: 517  547
           
Sbjct: 188  77

[Close]

BLAST of WMU15045 vs. TrEMBL
Match: A0A0J8CGR0_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g110520 PE=4 SV=1)

HSP 1 Score: 71.6 bits (174), Expect = 1.4e-09
Identity = 35/47 (74.47%), Postives = 40/47 (85.11%), Query Frame = -1


Query: 89  PLSIKLKGITNDSKDPSVDTFQSTTLPMLKRFGVNPDDVNLKIECRG 148
           PLSI LKGITND+KDPSVDTF+STTL +LKRFGV  + + LKIE RG
Sbjct: 112 PLSINLKGITNDAKDPSVDTFRSTTLNILKRFGVPSEGLQLKIESRG 158

Query: 149  208
           
Sbjct: 172  158

Query: 209  230
           
Sbjct: 232  158

HSP 2 Score: 53.9 bits (128), Expect = 3.0e-04
Identity = 26/37 (70.27%), Postives = 31/37 (83.78%), Query Frame = -3


Query: 228 GIVMGWEKFGVYDCGLSRSIAYFLEPLILLALFGRKP 287
           GIVMG  K+  +DCGLSRSI YFLEPLI+L LFG++P
Sbjct: 77  GIVMGG-KYLTHDCGLSRSIGYFLEPLIVLGLFGKRP 112

Query: 288  339
           
Sbjct: 137  112

HSP 3 Score: 89.7 bits (221), Expect = 5.0e-15
Identity = 42/70 (60.00%), Postives = 53/70 (75.71%), Query Frame = -2


Query: 337 RIKGKPNSKTKLVLATLSRTPVRIYGIRPNTISPGLRPHEKSFLDLLEKLCDDCFIDINE 396
           ++KG  N + +L+L+TLS TP+ I  IR +   PGLRPHE SFL LLEK+ DDC ++INE
Sbjct: 8   KLKGSQNLRLRLLLSTLSSTPILIEDIRADATWPGLRPHEVSFLRLLEKISDDCLVEINE 67

Query: 397 TGTILKYKPG 456
           TGT LKYKPG
Sbjct: 68  TGTKLKYKPG 77

Query: 457  516
           
Sbjct: 128  77

Query: 517  547
           
Sbjct: 188  77

[Close]

BLAST of WMU15045 vs. TrEMBL
Match: A0A068U235_COFCA (Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00039512001 PE=4 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 1.8e-12
Identity = 42/57 (73.68%), Postives = 48/57 (84.21%), Query Frame = -1


Query: 83  LLCLVGN-PLSIKLKGITNDSKDPSVDTFQSTTLPMLKRFGVNPDDVNLKIECRGGA 142
           LL L G  PL I+L+GITNDSKDPSVDTF+STTLP+LKRFGVNP+ + LKIE RG A
Sbjct: 104 LLGLFGRKPLCIRLRGITNDSKDPSVDTFRSTTLPILKRFGVNPEGLELKIESRGVA 160

Query: 143  202
           
Sbjct: 164  160

Query: 203  251
           
Sbjct: 224  160

HSP 2 Score: 53.5 bits (127), Expect = 4.0e-04
Identity = 26/37 (70.27%), Postives = 30/37 (81.08%), Query Frame = -3


Query: 228 GIVMGWEKFGVYDCGLSRSIAYFLEPLILLALFGRKP 287
           GIVMG +   ++DCG+ RSI YFLEPLILL LFGRKP
Sbjct: 77  GIVMGGKHL-IHDCGVIRSIGYFLEPLILLGLFGRKP 112

Query: 288  339
           
Sbjct: 137  112

HSP 3 Score: 88.2 bits (217), Expect = 1.5e-14
Identity = 42/70 (60.00%), Postives = 52/70 (74.29%), Query Frame = -2


Query: 337 RIKGKPNSKTKLVLATLSRTPVRIYGIRPNTISPGLRPHEKSFLDLLEKLCDDCFIDINE 396
           ++KG  N + +L+LATLS   + I  IR +   PGLRPHE SFL LLEK+CDDC ++INE
Sbjct: 8   KLKGSQNLRIRLLLATLSSKSIIIEDIRADATWPGLRPHEVSFLRLLEKVCDDCVVEINE 67

Query: 397 TGTILKYKPG 456
           TGT LKYKPG
Sbjct: 68  TGTKLKYKPG 77

Query: 457  516
           
Sbjct: 128  77

Query: 517  547
           
Sbjct: 188  77

[Close]

BLAST of WMU15045 vs. TrEMBL
Match: K4B7R6_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 5.7e-11
Identity = 47/91 (51.65%), Postives = 61/91 (67.03%), Query Frame = -1


Query: 83  GLSWGGRNLESTIVVLVAPLPISLSH*FFL--LCLVG----NPLSIKLKGITNDSKDPSV 142
           G+  GGR+L       V    +S S  +FL  L ++G     PL+I+LKGITNDSKDPS+
Sbjct: 77  GIIMGGRHL-------VHDCGVSRSISYFLEPLIVLGLFGKKPLTIRLKGITNDSKDPSI 136

Query: 143 DTFQSTTLPMLKRFGVNPDDVNLKIECRGGA 202
           DTF+STTLP+LK+FGV  + + LKIE RG A
Sbjct: 137 DTFRSTTLPILKQFGVPAEGLELKIESRGVA 160

Query: 203  262
           
Sbjct: 197  160

Query: 263  322
           
Sbjct: 257  160

Query: 323  338
           
Sbjct: 317  160

HSP 2 Score: 55.5 bits (132), Expect = 1.0e-04
Identity = 42/112 (37.50%), Postives = 59/112 (52.68%), Query Frame = -3


Query: 228 YKELKGSQILRQNWYWRP*AALQFVSMVFDPIRSLQVFDLTRNPFSTYWRSFAMTASSIS 287
           Y +LKGSQ LR        A L   S++ + IR+   +   R    ++ R          
Sbjct: 6   YMKLKGSQNLRIRLLL---ATLSSKSIIIEDIRADATWPGLRPHEVSFLRLLEKVCDDCV 65

Query: 288 MRPAQS*STSL----GIVMGWEKFGVYDCGLSRSIAYFLEPLILLALFGRKP 347
           +   ++  T L    GI+MG     V+DCG+SRSI+YFLEPLI+L LFG+KP
Sbjct: 66  VEINET-GTKLKYKPGIIMGGRHL-VHDCGVSRSISYFLEPLIVLGLFGKKP 112

Query: 348  407
           
Sbjct: 126  112

Query: 408  467
           
Sbjct: 186  112

Query: 468  527
           
Sbjct: 246  112

Query: 528  552
           
Sbjct: 306  112

HSP 3 Score: 88.2 bits (217), Expect = 1.5e-14
Identity = 41/71 (57.75%), Postives = 54/71 (76.06%), Query Frame = -2


Query: 337 QRIKGKPNSKTKLVLATLSRTPVRIYGIRPNTISPGLRPHEKSFLDLLEKLCDDCFIDIN 396
           +++KG  N + +L+LATLS TP+ I GIR N + PGLR HE S L LLEK+ DDC + IN
Sbjct: 7   KKLKGSQNFRQRLILATLSATPIIIKGIRANDMLPGLRLHEVSLLRLLEKISDDCVVKIN 66

Query: 397 ETGTILKYKPG 456
           ETGT+++YKPG
Sbjct: 67  ETGTMVQYKPG 77

Query: 457  516
           
Sbjct: 127  77

Query: 517  550
           
Sbjct: 187  77

[Close]

BLAST of WMU15045 vs. NCBI nr
Match: gi|449442617|ref|XP_004139077.1| (PREDICTED: probable RNA 3'-terminal phosphate cyclase-like protein [Cucumis sativus])

HSP 1 Score: 120.6 bits (301), Expect = 3.8e-24
Identity = 55/71 (77.46%), Postives = 62/71 (87.32%), Query Frame = -2


Query: 337 QRIKGKPNSKTKLVLATLSRTPVRIYGIRPNTISPGLRPHEKSFLDLLEKLCDDCFIDIN 396
           + ++G    +  LVLATLSRTPVRI+ IRPNTISPGLRP+EKS LDLLEK+CDDCFIDIN
Sbjct: 7   KELRGSQILRQNLVLATLSRTPVRIHDIRPNTISPGLRPYEKSLLDLLEKICDDCFIDIN 66

Query: 397 ETGTILKYKPG 456
           ETGTILKYKPG
Sbjct: 67  ETGTILKYKPG 77

Query: 457  516
           
Sbjct: 127  77

Query: 517  550
           
Sbjct: 187  77

[Close]

BLAST of WMU15045 vs. NCBI nr
Match: gi|659098772|ref|XP_008450289.1| (PREDICTED: probable RNA 3'-terminal phosphate cyclase-like protein [Cucumis melo])

HSP 1 Score: 118.2 bits (295), Expect = 1.9e-23
Identity = 55/71 (77.46%), Postives = 61/71 (85.92%), Query Frame = -2


Query: 337 QRIKGKPNSKTKLVLATLSRTPVRIYGIRPNTISPGLRPHEKSFLDLLEKLCDDCFIDIN 396
           + ++G    + KLVLATLSRTPVRI  IRPNTISPGLRP+EKS LDLLEK+CDDCFIDIN
Sbjct: 7   KELRGSQILRQKLVLATLSRTPVRIDDIRPNTISPGLRPYEKSLLDLLEKICDDCFIDIN 66

Query: 397 ETGTILKYKPG 456
           ETGT LKYKPG
Sbjct: 67  ETGTSLKYKPG 77

Query: 457  516
           
Sbjct: 127  77

Query: 517  550
           
Sbjct: 187  77

[Close]

BLAST of WMU15045 vs. NCBI nr
Match: gi|658021272|ref|XP_008346029.1| (PREDICTED: probable RNA 3'-terminal phosphate cyclase-like protein [Malus domestica])

HSP 1 Score: 96.3 bits (238), Expect = 7.7e-17
Identity = 59/139 (42.45%), Postives = 77/139 (55.40%), Query Frame = -2


Query: 145 QRIKGKPNSKTKLVLATLSRTPVRIYGIRPNTISPGLRPHEKSFLDLLEKLCDDCFIDIN 204
           +++ G  N + +LVLA L+ TPV I  IR     PGLRPHE SFL LLEK+ DDC ++IN
Sbjct: 7   KKLTGSQNLRQRLVLAALASTPVLIEDIRAEETWPGLRPHEVSFLRLLEKVSDDCVVEIN 66

Query: 205 ETGTILKYKP----GDCHGVGEIWSLRLWS*SLHCLFP*AIDSSCFVW*ETPSPLS*KVL 264
           ETGT LK+KP    G  + V +    R     L  LF   + +      + P  ++ K +
Sbjct: 67  ETGTKLKFKPVIVMGGRNLVHDCGLSRAVGYFLEPLFVLGLFA------KKPLTITLKGI 126

Query: 265 QMIQRIRPLILSSLLPCQC 324
           QMI R   LI S LL C C
Sbjct: 127 QMIPRTHLLIHSGLLLCPC 139

Query: 325  384
           
Sbjct: 187  139

Query: 385  444
           
Sbjct: 247  139

Query: 445  504
           
Sbjct: 307  139

Query: 505  550
           
Sbjct: 367  139

[Close]

BLAST of WMU15045 vs. NCBI nr
Match: gi|1009120630|ref|XP_015877027.1| (PREDICTED: probable RNA 3'-terminal phosphate cyclase-like protein [Ziziphus jujuba])

HSP 1 Score: 94.7 bits (234), Expect = 2.2e-16
Identity = 44/71 (61.97%), Postives = 53/71 (74.65%), Query Frame = -2


Query: 337 QRIKGKPNSKTKLVLATLSRTPVRIYGIRPNTISPGLRPHEKSFLDLLEKLCDDCFIDIN 396
           +R+KG    + +L+LATLS TP+ I  IR +   PGL PHE SFL LLEKLCDDC ++IN
Sbjct: 7   KRLKGSQGLRQRLLLATLSATPILIEDIRADHTWPGLLPHEVSFLRLLEKLCDDCVVEIN 66

Query: 397 ETGTILKYKPG 456
           ETGT LKYKPG
Sbjct: 67  ETGTKLKYKPG 77

Query: 457  516
           
Sbjct: 127  77

Query: 517  550
           
Sbjct: 187  77

[Close]

BLAST of WMU15045 vs. NCBI nr
Match: gi|731333776|ref|XP_010677903.1| (PREDICTED: probable RNA 3'-terminal phosphate cyclase-like protein [Beta vulgaris subsp. vulgaris])

HSP 1 Score: 94.0 bits (232), Expect = 3.8e-16
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = -2


Query: 337 RIKGKPNSKTKLVLATLSRTPVRIYGIRPNTISPGLRPHEKSFLDLLEKLCDDCFIDINE 396
           R +G  N + +L+L+TLS TP+ I  IR N   PGLRPHE S L LLEK+CDDC ++INE
Sbjct: 8   RFQGSQNLRLRLLLSTLSSTPILIDQIRSNETIPGLRPHEVSLLRLLEKVCDDCHVEINE 67

Query: 397 TGTILKYKPG 456
           TGT LKYKPG
Sbjct: 68  TGTKLKYKPG 77

Query: 457  516
           
Sbjct: 128  77

Query: 517  547
           
Sbjct: 188  77

The following BLAST results are available for this feature:

BLAST of WMU15045 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G22100.1	4.5e-15	51.32	RNA cyclase family protein	[more]

BLAST of WMU15045 vs. Swiss-Prot


Match Name	E-value	Identity	Description
RCL1_ARATH	7.9e-14	51.32	Probable RNA 3'-terminal phosphate cyclase-like protein OS=Arabidopsis thaliana ...	[more]
RCL1_SCHPO	1.8e-10	46.05	Probable RNA 3'-terminal phosphate cyclase-like protein OS=Schizosaccharomyces p...	[more]
RCL1_HUMAN	1.0e-08	48.48	RNA 3'-terminal phosphate cyclase-like protein OS=Homo sapiens GN=RCL1 PE=1 SV=3	[more]
RCL1_MOUSE	1.0e-08	48.48	RNA 3'-terminal phosphate cyclase-like protein OS=Mus musculus GN=Rcl1 PE=2 SV=1	[more]
RCL1_BOVIN	1.3e-08	48.48	RNA 3'-terminal phosphate cyclase-like protein OS=Bos taurus GN=RCL1 PE=2 SV=1	[more]

BLAST of WMU15045 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LXL4_CUCSA	3.8e-23	77.46	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G633410 PE=4 SV=1	[more]
A0A0A0LXL4_CUCSA	2.8e-18	65.56	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G633410 PE=4 SV=1	[more]
A0A0J8CGR0_BETVU	1.4e-09	74.47	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_5g110520 PE=4 S...	[more]
A0A068U235_COFCA	1.8e-12	73.68	Uncharacterized protein OS=Coffea canephora GN=GSCOC_T00039512001 PE=4 SV=1	[more]
K4B7R6_SOLLC	5.7e-11	51.65	Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1	[more]

BLAST of WMU15045 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|449442617\|ref\|XP_004139077.1\|	3.8e-24	77.46	PREDICTED: probable RNA 3'-terminal phosphate cyclase-like protein [Cucumis sati...	[more]
gi\|659098772\|ref\|XP_008450289.1\|	1.9e-23	77.46	PREDICTED: probable RNA 3'-terminal phosphate cyclase-like protein [Cucumis melo...	[more]
gi\|658021272\|ref\|XP_008346029.1\|	7.7e-17	42.45	PREDICTED: probable RNA 3'-terminal phosphate cyclase-like protein [Malus domest...	[more]
gi\|1009120630\|ref\|XP_015877027.1\|	2.2e-16	61.97	PREDICTED: probable RNA 3'-terminal phosphate cyclase-like protein [Ziziphus juj...	[more]
gi\|731333776\|ref\|XP_010677903.1\|	3.8e-16	61.43	PREDICTED: probable RNA 3'-terminal phosphate cyclase-like protein [Beta vulgari...	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR000228	RNA3'_term_phos_cyc
IPR013792	RNA3'P_cycl/enolpyr_Trfase_a/b
IPR023797	RNA3'_phos_cyclase_dom

Vocabulary: **Biological Process**
Term	Definition
GO:0006396	RNA processing

Vocabulary: **Molecular Function**
Term	Definition
GO:0003824	catalytic activity

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006396	RNA processing
molecular_function	GO:0003824	catalytic activity

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla007323	Cla007323	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S1_0130360	S1_0130360	EST
S2_0187387	S2_0187387	EST
S3_0156364	S3_0156364	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000228	RNA 3'-terminal phosphate cyclase	PANTHER	PTHR11096	RNA 3' TERMINAL PHOSPHATE CYCLASE	coord: 18..160 score: 2.3
IPR013792	RNA 3'-terminal phosphate cyclase/enolpyruvate transferase, alpha/beta	unknown	SSF55205	EPT/RTPC-like	coord: 17..160 score: 4.38
IPR023797	RNA 3'-terminal phosphate cyclase domain	GENE3D	G3DSA:3.65.10.20		coord: 17..161 score: 3.1
IPR023797	RNA 3'-terminal phosphate cyclase domain	PFAM	PF01137	RTC	coord: 17..160 score: 2.1
None	No IPR available	PANTHER	PTHR11096:SF1	RNA 3'-TERMINAL PHOSPHATE CYCLASE-LIKE PROTEIN	coord: 18..160 score: 2.3