WMU14944 (transcribed_cluster) Watermelon (97103) v1

NameWMU14944
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionPrefoldin subunit, putative
LocationChr5 : 4753655 .. 4754079 (-)
Sequence length440
The following sequences are available for this feature:

transcribed_cluster sequence

TTCAACGCAACAAAGAGGGACTCGAGGAGGTTATTTTCCAGGCTCAATGAGGCCTTGGAGAAGAAGAAGAAGGAAATTTCTGACTTGGAGGCCAAATACAAGATCAGGATTAGAAAGCCTGATGGTGAGGCTAAGGAGGAAGACACTGGGCGAAAAAGAAGGGTGCAGCCCAAGGAGTGTTAGTGGGGCCCTGCAGGTGAAAGTTAAACTCTCAACCCAATGGTGAACTTTTATTATATTCTTGTAGTGCTGAACTTTTAGTTTCATCTGATGGTTCACTCTTATAAGCGTGTTTTGTGTTGAAATTTTTGTTTTGACAACTTTCAGTTCAATAGGAAGATTCCAGGACTTGTATGGTATATAGATGATTTTGAGGGGAGGGAAAGTTAGACTTTTAAGTACGTTTTGTACATGGAAAATTTTACTTCTAAGTTTTAGTA
BLAST of WMU14944 vs. TrEMBL
Match: A0A0A0KVR4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_5G638310 PE=4 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 1.7e-13
Identity = 46/64 (71.88%), Postives = 49/64 (76.56%), Query Frame = 1

Query: 13  KRDSRRLFSRLNEALEKKKKEISDLEAKYKIRIRKPDGEAKEEDTGRKRRVQPKEC*WGP 72
           K     + SRLNEALEKKKKEISDLEAKYKIRIRKPDGEAKEED+GRK     +    GP
Sbjct: 86  KEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRKPDGEAKEEDSGRKEGA-AQGVLVGP 145

Query: 73  AGES 132
           AGES
Sbjct: 146 AGES 148

Query: 133 192
           
Sbjct: 206 148

Query: 193 205
           
Sbjct: 266 148

BLAST of WMU14944 vs. TrEMBL
Match: M1BCJ2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400016332 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-08
Identity = 37/64 (57.81%), Postives = 43/64 (67.19%), Query Frame = 1

Query: 13  KRDSRRLFSRLNEALEKKKKEISDLEAKYKIRIRKPDGEAKEEDTGRKRRVQPKEC*WGP 72
           K     + +RLNEALEKKKKEISD EAKYKIRIRKPD E KEE  G ++    +    GP
Sbjct: 82  KEGIEEVIARLNEALEKKKKEISDFEAKYKIRIRKPDAEVKEE--GGRKEGSAQGVLVGP 141

Query: 73  AGES 132
           AG +
Sbjct: 142 AGSN 143

Query: 133 192
           
Sbjct: 202 143

Query: 193 205
           
Sbjct: 262 143

BLAST of WMU14944 vs. TrEMBL
Match: A0A0V0HIG2_SOLCH (Putative prefoldin subunit 2-like OS=Solanum chacoense PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 1.3e-08
Identity = 37/64 (57.81%), Postives = 43/64 (67.19%), Query Frame = 1

Query: 13  KRDSRRLFSRLNEALEKKKKEISDLEAKYKIRIRKPDGEAKEEDTGRKRRVQPKEC*WGP 72
           K     + +RLNEALEKKKKEISD EAKYKIRIRKPD E KEE  G ++    +    GP
Sbjct: 82  KEGIEEVIARLNEALEKKKKEISDFEAKYKIRIRKPDAEVKEE--GGRKEGSAQGVLVGP 141

Query: 73  AGES 132
           AG +
Sbjct: 142 AGSN 143

Query: 133 192
           
Sbjct: 202 143

Query: 193 205
           
Sbjct: 262 143

BLAST of WMU14944 vs. TrEMBL
Match: A0A059B3M3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03463 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-07
Identity = 34/48 (70.83%), Postives = 37/48 (77.08%), Query Frame = 1

Query: 13  KRDSRRLFSRLNEALEKKKKEISDLEAKYKIRIRKPDGEAKEEDTGRK 72
           K     +  RLNEALEKKKKEI+DLEAKYKIRIRK DGE K +D GRK
Sbjct: 83  KEGLEEVIGRLNEALEKKKKEIADLEAKYKIRIRKSDGEVK-DDGGRK 129

Query: 73  132
           
Sbjct: 143 129

Query: 133 157
           
Sbjct: 203 129

BLAST of WMU14944 vs. TrEMBL
Match: K4C633_SOLLC (Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.4e-07
Identity = 37/64 (57.81%), Postives = 43/64 (67.19%), Query Frame = 1

Query: 13  KRDSRRLFSRLNEALEKKKKEISDLEAKYKIRIRKPDGEAKEEDTGRKRRVQPKEC*WGP 72
           K     + +RLNEALEKKKKEISD EAKYKIRIRKPD E KEE  G ++    +    GP
Sbjct: 62  KEGIEEVIARLNEALEKKKKEISDFEAKYKIRIRKPD-EVKEE--GARKEGSAQGVLVGP 121

Query: 73  AGES 132
           AG +
Sbjct: 122 AGSN 122

Query: 133 192
           
Sbjct: 182 122

Query: 193 205
           
Sbjct: 242 122

BLAST of WMU14944 vs. NCBI nr
Match: gi|449447400|ref|XP_004141456.1| (PREDICTED: probable prefoldin subunit 2 [Cucumis sativus])

HSP 1 Score: 78.6 bits (192), Expect = 1.0e-11
Identity = 46/64 (71.88%), Postives = 49/64 (76.56%), Query Frame = 1

Query: 13  KRDSRRLFSRLNEALEKKKKEISDLEAKYKIRIRKPDGEAKEEDTGRKRRVQPKEC*WGP 72
           K     + SRLNEALEKKKKEISDLEAKYKIRIRKPDGEAKEED+GRK     +    GP
Sbjct: 86  KEGLEEVISRLNEALEKKKKEISDLEAKYKIRIRKPDGEAKEEDSGRKEGA-AQGVLVGP 145

Query: 73  AGES 132
           AGES
Sbjct: 146 AGES 148

Query: 133 192
           
Sbjct: 206 148

Query: 193 205
           
Sbjct: 266 148

BLAST of WMU14944 vs. NCBI nr
Match: gi|659118879|ref|XP_008459357.1| (PREDICTED: probable prefoldin subunit 2 [Cucumis melo])

HSP 1 Score: 73.2 bits (178), Expect = 4.3e-10
Identity = 44/64 (68.75%), Postives = 48/64 (75.00%), Query Frame = 1

Query: 13  KRDSRRLFSRLNEALEKKKKEISDLEAKYKIRIRKPDGEAKEEDTGRKRRVQPKEC*WGP 72
           K     + SRL+EALEKKKKEISDLEAKYKIRIRK DGEAKEED+GRK     +    GP
Sbjct: 86  KEGLEEVISRLHEALEKKKKEISDLEAKYKIRIRKHDGEAKEEDSGRKEGA-AQGVLVGP 145

Query: 73  AGES 132
           AGES
Sbjct: 146 AGES 148

Query: 133 192
           
Sbjct: 206 148

Query: 193 205
           
Sbjct: 266 148

BLAST of WMU14944 vs. NCBI nr
Match: gi|565368127|ref|XP_006350704.1| (PREDICTED: probable prefoldin subunit 2 [Solanum tuberosum])

HSP 1 Score: 62.0 bits (149), Expect = 9.9e-07
Identity = 37/64 (57.81%), Postives = 43/64 (67.19%), Query Frame = 1

Query: 13  KRDSRRLFSRLNEALEKKKKEISDLEAKYKIRIRKPDGEAKEEDTGRKRRVQPKEC*WGP 72
           K     + +RLNEALEKKKKEISD EAKYKIRIRKPD E KEE  G ++    +    GP
Sbjct: 82  KEGIEEVIARLNEALEKKKKEISDFEAKYKIRIRKPDAEVKEE--GGRKEGSAQGVLVGP 141

Query: 73  AGES 132
           AG +
Sbjct: 142 AGSN 143

Query: 133 192
           
Sbjct: 202 143

Query: 193 205
           
Sbjct: 262 143

BLAST of WMU14944 vs. NCBI nr
Match: gi|697136967|ref|XP_009622571.1| (PREDICTED: probable prefoldin subunit 2 [Nicotiana tomentosiformis])

HSP 1 Score: 59.7 bits (143), Expect = 4.9e-06
Identity = 35/64 (54.69%), Postives = 42/64 (65.62%), Query Frame = 1

Query: 13  KRDSRRLFSRLNEALEKKKKEISDLEAKYKIRIRKPDGEAKEEDTGRKRRVQPKEC*WGP 72
           K     + +RLNEALEKKKKEISD E KYKIR+RKPD E KEE + ++   Q      GP
Sbjct: 82  KEGIEEVIARLNEALEKKKKEISDFETKYKIRMRKPDAEVKEESSRKEGSAQGVLV--GP 141

Query: 73  AGES 132
           AG +
Sbjct: 142 AGSN 143

Query: 133 192
           
Sbjct: 202 143

Query: 193 205
           
Sbjct: 262 143

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0KVR4_CUCSA1.7e-1371.88Uncharacterized protein OS=Cucumis sativus GN=Csa_5G638310 PE=4 SV=1[more]
M1BCJ2_SOLTU1.3e-0857.81Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400016332 PE=4 SV=1[more]
A0A0V0HIG2_SOLCH1.3e-0857.81Putative prefoldin subunit 2-like OS=Solanum chacoense PE=4 SV=1[more]
A0A059B3M3_EUCGR1.1e-0770.83Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_H03463 PE=4 SV=1[more]
K4C633_SOLLC2.4e-0757.81Uncharacterized protein OS=Solanum lycopersicum PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449447400|ref|XP_004141456.1|1.0e-1171.88PREDICTED: probable prefoldin subunit 2 [Cucumis sativus][more]
gi|659118879|ref|XP_008459357.1|4.3e-1068.75PREDICTED: probable prefoldin subunit 2 [Cucumis melo][more]
gi|565368127|ref|XP_006350704.1|9.9e-0757.81PREDICTED: probable prefoldin subunit 2 [Solanum tuberosum][more]
gi|697136967|ref|XP_009622571.1|4.9e-0654.69PREDICTED: probable prefoldin subunit 2 [Nicotiana tomentosiformis][more]
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla021627Cla021627gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S3_0145458S3_0145458EST
S4_0003328S4_0003328EST


Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableunknownCoilCoilcoord: 5..39
scor