WMU12764 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU12764
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown protein
Location	Chr2 : 3835799 .. 3836175 (-)
Sequence length	375

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AAATCCGAAGTTCGAAGCCCCGAAACGGCGGAGAAAGTAACGTTTCTACAATCAACGGAACGAAATGGAGACTCAAATTAACGCAAAGCTTTCTGAAATTAAAGCAGTTAGGAAGCGGAAAAATTACCCGGCGAGGCGATCGTGCTGGCGGCGGAGCGAATCGGCGATTCCCAAGGCATCGAGAGCCTTCCAAGCATTATTCCATGTGGTCAAAGCGTATCCAGCGGCTCTCAAACAATCGGAAGTCTCCAAAACTAAGCTTCGAATCCCTAACCTGTGAAGCCCTAAGGCGGTGGTGAGTCCTGCAATTCCGGCTCCGACTATCACTATCTCTTCAACATCAGCTTTTCTTCCATAATTCCTGCGGAGGAAACG

Library


Library category	ESTs
watermelon fruit 18d library	1
watermelon fruit 26d library	2

Homology

[Close]

BLAST of WMU12764 vs. TAIR10
Match: AT4G38540.1 (AT4G38540.1 FAD/NAD(P)-binding oxidoreductase family protein)

HSP 1 Score: 77.0 bits (188), Expect = 9.0e-15
Identity = 36/69 (52.17%), Postives = 45/69 (65.22%), Query Frame = -1


Query: 127 EIVIVXXXXXXXXXXXXXHRLGIRSLVLETSDCLRAAGYALTTWNNAWKALDALGIADSL 186
           +I+IV             HRLGIRS+VLE+S+ LRA G+A TTW NAWKA++ALG++  +
Sbjct: 8   DIIIVGAGISGLSTAVGLHRLGIRSMVLESSETLRATGFAFTTWFNAWKAMEALGVSQHI 67

Query: 187 RRQHDRLAG 246
           R  HDRL G
Sbjct: 68  RSLHDRLEG 76

Query: 247  306
           
Sbjct: 128  76

Query: 307  334
           
Sbjct: 188  76

[Close]

BLAST of WMU12764 vs. TAIR10
Match: AT5G05320.1 (AT5G05320.1 FAD/NAD(P)-binding oxidoreductase family protein)

HSP 1 Score: 67.0 bits (162), Expect = 9.3e-12
Identity = 35/78 (44.87%), Postives = 48/78 (61.54%), Query Frame = -1


Query: 103 EEIVIVXXXXXXXXXXXXXHRLGIRSLVLETSDCLRAAGYALTTWNNAWKALDALGIADS 162
           ++I+IV             HRLGIRS+VLE+S+ LRA G+AL+ + NAWKA++ALGI+  
Sbjct: 7   QDIIIVGAGISGLATALGLHRLGIRSIVLESSEQLRATGFALSLYFNAWKAMEALGISQH 66

Query: 163 LRRQHDRLAG*FFRFLTA 222
           +R   DR  G   R ++A
Sbjct: 67  IRSLGDRFQGWVVRPISA 84

Query: 223  282
           
Sbjct: 127  84

Query: 283  337
           
Sbjct: 187  84

[Close]

BLAST of WMU12764 vs. TAIR10
Match: AT2G35660.1 (AT2G35660.1 FAD/NAD(P)-binding oxidoreductase family protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.6e-08
Identity = 28/70 (40.00%), Postives = 37/70 (52.86%), Query Frame = -1


Query: 127 EEIVIVXXXXXXXXXXXXXHRLGIRSLVLETSDCLRAAGYALTTWNNAWKALDALGIADS 186
           E++VIV             HRLGIRS+VLE ++ LR  G +LT + N W+ LDA+ +   
Sbjct: 45  EKVVIVGAGIGGLATAVSLHRLGIRSVVLEQAESLRTGGTSLTLFKNGWRVLDAISVGPQ 104

Query: 187 LRRQHDRLAG 246
           LR Q   + G
Sbjct: 105 LRTQFLEIEG 114

Query: 247  306
           
Sbjct: 165  114

Query: 307  337
           
Sbjct: 225  114

[Close]

BLAST of WMU12764 vs. TAIR10
Match: AT2G29720.1 (AT2G29720.1 FAD/NAD(P)-binding oxidoreductase family protein)

HSP 1 Score: 56.2 bits (134), Expect = 1.6e-08
Identity = 29/70 (41.43%), Postives = 37/70 (52.86%), Query Frame = -1


Query: 127 EEIVIVXXXXXXXXXXXXXHRLGIRSLVLETSDCLRAAGYALTTWNNAWKALDALGIADS 186
           E++VIV             HRLGIRS+VLE ++ LR  G +LT   N W+ LDA+ I   
Sbjct: 43  EKVVIVGGGIGGLATAVALHRLGIRSVVLEQAESLRTGGASLTLSKNGWRVLDAISIGPQ 102

Query: 187 LRRQHDRLAG 246
           LR+Q   + G
Sbjct: 103 LRKQFLEMQG 112

Query: 247  306
           
Sbjct: 163  112

Query: 307  337
           
Sbjct: 223  112

[Close]

BLAST of WMU12764 vs. TAIR10
Match: AT4G15760.1 (AT4G15760.1 monooxygenase 1)

HSP 1 Score: 49.3 bits (116), Expect = 2.0e-06
Identity = 25/60 (41.67%), Postives = 33/60 (55.00%), Query Frame = -1


Query: 151 IVIVXXXXXXXXXXXXXHRLGIRSLVLETSDCLRAAGYALTTWNNAWKALDALGIADSLR 210
           IVIV             HR GI+S+VLE ++ +R+ G  + T +N W+ALD LG+ D LR
Sbjct: 31  IVIVGGGIAGLATSIALHRKGIKSVVLERAEKVRSEGAGIGTLSNGWRALDQLGVGDRLR 90

Query: 211  270
           
Sbjct: 91   90

Query: 271  330
           
Sbjct: 151  90

[Close]

BLAST of WMU12764 vs. TrEMBL
Match: A0A0A0K2K7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G014500 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.4e-19
Identity = 53/71 (74.65%), Postives = 56/71 (78.87%), Query Frame = -1


Query: 127 VEEIVIVXXXXXXXXXXXXXHRLGIRSLVLETSDCLRAAGYALTTWNNAWKALDALGIAD 186
           VE+IVIV             HRLGIRSLVLETSD LRAAGYALTTWNNAWKALDALG+AD
Sbjct: 8   VEDIVIVGAGISGLATALGLHRLGIRSLVLETSDSLRAAGYALTTWNNAWKALDALGVAD 67

Query: 187 SLRRQHDRLAG 246
           SLR +HDRLAG
Sbjct: 68  SLRLRHDRLAG 78

Query: 247  306
           
Sbjct: 128  78

Query: 307  340
           
Sbjct: 188  78

[Close]

BLAST of WMU12764 vs. TrEMBL
Match: A0A059ANL2_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01448 PE=4 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 7.7e-15
Identity = 44/71 (61.97%), Postives = 51/71 (71.83%), Query Frame = -1


Query: 127 VEEIVIVXXXXXXXXXXXXXHRLGIRSLVLETSDCLRAAGYALTTWNNAWKALDALGIAD 186
           VE+IVIV             HRLGI+SLVLE+ D LR  G+ALTTW NAWKALDALGI +
Sbjct: 4   VEDIVIVGAGTAGLTTALGLHRLGIKSLVLESHDSLRITGFALTTWTNAWKALDALGITE 63

Query: 187 SLRRQHDRLAG 246
           SLRRQH++L G
Sbjct: 64  SLRRQHNQLLG 74

Query: 247  306
           
Sbjct: 124  74

Query: 307  340
           
Sbjct: 184  74

[Close]

BLAST of WMU12764 vs. TrEMBL
Match: A0A059AP90_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01444 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 1.3e-14
Identity = 44/71 (61.97%), Postives = 51/71 (71.83%), Query Frame = -1


Query: 127 VEEIVIVXXXXXXXXXXXXXHRLGIRSLVLETSDCLRAAGYALTTWNNAWKALDALGIAD 186
           VE+IVIV             HRLGIRSLVLE+SD LRA G+ALTTW NAW+ALDA+GI +
Sbjct: 4   VEDIVIVGAGIAGLTTALGLHRLGIRSLVLESSDGLRATGFALTTWTNAWRALDAVGIGE 63

Query: 187 SLRRQHDRLAG 246
            LR+QH RL G
Sbjct: 64  PLRQQHHRLLG 74

Query: 247  306
           
Sbjct: 124  74

Query: 307  340
           
Sbjct: 184  74

[Close]

BLAST of WMU12764 vs. TrEMBL
Match: M5VVX5_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006387mg PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 3.8e-14
Identity = 43/69 (62.32%), Postives = 49/69 (71.01%), Query Frame = -1


Query: 127 EIVIVXXXXXXXXXXXXXHRLGIRSLVLETSDCLRAAGYALTTWNNAWKALDALGIADSL 186
           ++VIV             HRLGIRSLVLE+SD LR  G+ALTTW NAWKALDALG+ADSL
Sbjct: 6   DVVIVGAGISGLATSLGLHRLGIRSLVLESSDSLRTTGFALTTWTNAWKALDALGLADSL 65

Query: 187 RRQHDRLAG 246
           R+QH  L G
Sbjct: 66  RQQHVTLDG 74

Query: 247  306
           
Sbjct: 126  74

Query: 307  334
           
Sbjct: 186  74

[Close]

BLAST of WMU12764 vs. TrEMBL
Match: M5VJ44_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006383mg PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 5.0e-14
Identity = 43/69 (62.32%), Postives = 49/69 (71.01%), Query Frame = -1


Query: 127 EIVIVXXXXXXXXXXXXXHRLGIRSLVLETSDCLRAAGYALTTWNNAWKALDALGIADSL 186
           ++VIV             HRLGIRSLVLE+SD LR  G+ALTTW NAWKALDALG+ADSL
Sbjct: 6   DVVIVGAGISGLATSLGLHRLGIRSLVLESSDSLRTTGFALTTWTNAWKALDALGLADSL 65

Query: 187 RRQHDRLAG 246
           R+QH  L G
Sbjct: 66  RQQHVPLDG 74

Query: 247  306
           
Sbjct: 126  74

Query: 307  334
           
Sbjct: 186  74

[Close]

BLAST of WMU12764 vs. NCBI nr
Match: gi|659094208|ref|XP_008447940.1| (PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Cucumis melo])

HSP 1 Score: 111.3 bits (277), Expect = 1.2e-21
Identity = 56/74 (75.68%), Postives = 58/74 (78.38%), Query Frame = -1


Query: 127 KADVEEIVIVXXXXXXXXXXXXXHRLGIRSLVLETSDCLRAAGYALTTWNNAWKALDALG 186
           K DVEEIVIV             HRLGIRSLVLETSD LRAAGYALTTWNNAWKALDALG
Sbjct: 4   KGDVEEIVIVGAGISGLATALGLHRLGIRSLVLETSDSLRAAGYALTTWNNAWKALDALG 63

Query: 187 IADSLRRQHDRLAG 246
           +ADSLR +HDRLAG
Sbjct: 64  VADSLRLRHDRLAG 77

Query: 247  306
           
Sbjct: 124  77

Query: 307  349
           
Sbjct: 184  77

[Close]

BLAST of WMU12764 vs. NCBI nr
Match: gi|449454223|ref|XP_004144855.1| (PREDICTED: zeaxanthin epoxidase, chloroplastic [Cucumis sativus])

HSP 1 Score: 105.5 bits (262), Expect = 6.7e-20
Identity = 53/71 (74.65%), Postives = 56/71 (78.87%), Query Frame = -1


Query: 127 VEEIVIVXXXXXXXXXXXXXHRLGIRSLVLETSDCLRAAGYALTTWNNAWKALDALGIAD 186
           VE+IVIV             HRLGIRSLVLETSD LRAAGYALTTWNNAWKALDALG+AD
Sbjct: 8   VEDIVIVGAGISGLATALGLHRLGIRSLVLETSDSLRAAGYALTTWNNAWKALDALGVAD 67

Query: 187 SLRRQHDRLAG 246
           SLR +HDRLAG
Sbjct: 68  SLRLRHDRLAG 78

Query: 247  306
           
Sbjct: 128  78

Query: 307  340
           
Sbjct: 188  78

[Close]

BLAST of WMU12764 vs. NCBI nr
Match: gi|694329840|ref|XP_009355644.1| (PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Pyrus x bretschneideri])

HSP 1 Score: 90.1 bits (222), Expect = 2.9e-15
Identity = 45/71 (63.38%), Postives = 50/71 (70.42%), Query Frame = -1


Query: 127 VEEIVIVXXXXXXXXXXXXXHRLGIRSLVLETSDCLRAAGYALTTWNNAWKALDALGIAD 186
           VE++VIV             HRLGIRSLVLE+SD LR  G+ALTTW NAWKALDALGI D
Sbjct: 4   VEDVVIVGAGISGLATSLGLHRLGIRSLVLESSDSLRTTGFALTTWTNAWKALDALGIGD 63

Query: 187 SLRRQHDRLAG 246
           SLR+QH  L G
Sbjct: 64  SLRQQHVTLDG 74

Query: 247  306
           
Sbjct: 124  74

Query: 307  340
           
Sbjct: 184  74

[Close]

BLAST of WMU12764 vs. NCBI nr
Match: gi|702471006|ref|XP_010030694.1| (PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Eucalyptus grandis])

HSP 1 Score: 89.7 bits (221), Expect = 3.8e-15
Identity = 44/71 (61.97%), Postives = 51/71 (71.83%), Query Frame = -1


Query: 127 VEEIVIVXXXXXXXXXXXXXHRLGIRSLVLETSDCLRAAGYALTTWNNAWKALDALGIAD 186
           VE+IVIV             HRLGI+SLVLE+ D LR  G+ALTTW NAWKALDALGI +
Sbjct: 4   VEDIVIVGAGTAGLTTALGLHRLGIKSLVLESHDSLRITGFALTTWTNAWKALDALGITE 63

Query: 187 SLRRQHDRLAG 246
           SLRRQH++L G
Sbjct: 64  SLRRQHNQLLG 74

Query: 247  306
           
Sbjct: 124  74

Query: 307  340
           
Sbjct: 184  74

[Close]

BLAST of WMU12764 vs. NCBI nr
Match: gi|743779244|ref|XP_010920086.1| (PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Elaeis guineensis])

HSP 1 Score: 89.7 bits (221), Expect = 3.8e-15
Identity = 41/71 (57.75%), Postives = 51/71 (71.83%), Query Frame = -1


Query: 127 VEEIVIVXXXXXXXXXXXXXHRLGIRSLVLETSDCLRAAGYALTTWNNAWKALDALGIAD 186
           VE++VI+             HR+G+RSLVLE+SD LRAAG+ L TWNNAW+ALDALG+ D
Sbjct: 4   VEDVVIIGAGIAGLATALGLHRMGVRSLVLESSDSLRAAGFGLATWNNAWRALDALGVGD 63

Query: 187 SLRRQHDRLAG 246
           SLR+ H RL G
Sbjct: 64  SLRQSHVRLQG 74

Query: 247  306
           
Sbjct: 124  74

Query: 307  340
           
Sbjct: 184  74

The following BLAST results are available for this feature:

BLAST of WMU12764 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G38540.1	9.0e-15	52.17	FAD/NAD(P)-binding oxidoreductase family protein	[more]
AT5G05320.1	9.3e-12	44.87	FAD/NAD(P)-binding oxidoreductase family protein	[more]
AT2G35660.1	1.6e-08	40.00	FAD/NAD(P)-binding oxidoreductase family protein	[more]
AT2G29720.1	1.6e-08	41.43	FAD/NAD(P)-binding oxidoreductase family protein	[more]
AT4G15760.1	2.0e-06	41.67	monooxygenase 1	[more]

BLAST of WMU12764 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K2K7_CUCSA	1.4e-19	74.65	Uncharacterized protein OS=Cucumis sativus GN=Csa_7G014500 PE=4 SV=1	[more]
A0A059ANL2_EUCGR	7.7e-15	61.97	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01448 PE=4 SV=1	[more]
A0A059AP90_EUCGR	1.3e-14	61.97	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01444 PE=4 SV=1	[more]
M5VVX5_PRUPE	3.8e-14	62.32	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006387mg PE=4 SV=1	[more]
M5VJ44_PRUPE	5.0e-14	62.32	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa006383mg PE=4 SV=1	[more]

BLAST of WMU12764 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659094208\|ref\|XP_008447940.1\|	1.2e-21	75.68	PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Cucumis melo]	[more]
gi\|449454223\|ref\|XP_004144855.1\|	6.7e-20	74.65	PREDICTED: zeaxanthin epoxidase, chloroplastic [Cucumis sativus]	[more]
gi\|694329840\|ref\|XP_009355644.1\|	2.9e-15	63.38	PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Pyrus x bretschneideri]	[more]
gi\|702471006\|ref\|XP_010030694.1\|	3.8e-15	61.97	PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Eucalyptus grandis]	[more]
gi\|743779244\|ref\|XP_010920086.1\|	3.8e-15	57.75	PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Elaeis guineensis]	[more]

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla015815	Cla015815	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S2_0125545	S2_0125545	EST
S3_0060918	S3_0060918	EST
S3_0085957	S3_0085957	EST