WMU11738 (transcribed_cluster) Watermelon (97103) v1

NameWMU11738
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr2 : 7322876 .. 7323310 (-)
Sequence length437
The following sequences are available for this feature:

transcribed_cluster sequence

AGAATAGAAGATGGGTCAAATTTATTTCAGAACAGCCAGAAGCTACTCTTCCTGATGTGGAAGATAGGCTGGTCGAGCCGCAACCGCAGGAAGATGTTCCCAATGAGGCAGAGGTTCGGCTTCTTTCTGAATCTTCTTCGTCTTCGAATATAGCCCAGCAATAACATCCATGGATCAACCGATTTGGATGAGTCAAAATCTATGCTGACCATGCTGTTTCGAAGTGTACTCGGAAGGGAAATTTTCACTTCTGCAATGTTCTGAGAAGACCGTGGGCTTTATTGATGAAATGTTGAAGTTGCACATTGTTATGTAAACATATTTTATGTACAAATTGTTTTTATATTCTTTTGAAAGGTTATTGCTTCTATTGACATTGTTGTCAACGGATGTAACATAAAATGATTAGTTTCGACTGCAATATGATCATTTTAATT
BLAST of WMU11738 vs. TrEMBL
Match: A0A0A0K2Y2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071470 PE=4 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-10
Identity = 41/54 (75.93%), Postives = 43/54 (79.63%), Query Frame = 3

Query: 3   NRRWVKFISEQPE-ATLPDVEDRLVEPQPQEDVPNEAEVRLLXXXXXXXNIAQQ 62
           NRRWVKFISEQPE  TLPDVEDRLVE Q Q++VPNEAEVRLL       NIAQQ
Sbjct: 434 NRRWVKFISEQPEDTTLPDVEDRLVESQQQQEVPNEAEVRLL-SESSSSNIAQQ 486

Query: 63  122
           
Sbjct: 494 486

Query: 123 162
           
Sbjct: 554 486

BLAST of WMU11738 vs. NCBI nr
Match: gi|659110051|ref|XP_008455023.1| (PREDICTED: probable polyamine transporter At3g19553 [Cucumis melo])

HSP 1 Score: 76.3 bits (186), Expect = 5.1e-11
Identity = 42/54 (77.78%), Postives = 44/54 (81.48%), Query Frame = 3

Query: 3   NRRWVKFISEQPE-ATLPDVEDRLVEPQPQEDVPNEAEVRLLXXXXXXXNIAQQ 62
           NRRWVKFISEQPE  TL DVEDRLVEPQPQ++VPNEAEVRLL       NIAQQ
Sbjct: 434 NRRWVKFISEQPEDTTLSDVEDRLVEPQPQQEVPNEAEVRLL-SESSSSNIAQQ 486

Query: 63  122
           
Sbjct: 494 486

Query: 123 162
           
Sbjct: 554 486

BLAST of WMU11738 vs. NCBI nr
Match: gi|449438333|ref|XP_004136943.1| (PREDICTED: probable polyamine transporter At3g19553 [Cucumis sativus])

HSP 1 Score: 73.2 bits (178), Expect = 4.3e-10
Identity = 41/54 (75.93%), Postives = 43/54 (79.63%), Query Frame = 3

Query: 3   NRRWVKFISEQPE-ATLPDVEDRLVEPQPQEDVPNEAEVRLLXXXXXXXNIAQQ 62
           NRRWVKFISEQPE  TLPDVEDRLVE Q Q++VPNEAEVRLL       NIAQQ
Sbjct: 434 NRRWVKFISEQPEDTTLPDVEDRLVESQQQQEVPNEAEVRLL-SESSSSNIAQQ 486

Query: 63  122
           
Sbjct: 494 486

Query: 123 162
           
Sbjct: 554 486

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0K2Y2_CUCSA1.3e-1075.93Uncharacterized protein OS=Cucumis sativus GN=Csa_7G071470 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659110051|ref|XP_008455023.1|5.1e-1177.78PREDICTED: probable polyamine transporter At3g19553 [Cucumis melo][more]
gi|449438333|ref|XP_004136943.1|4.3e-1075.93PREDICTED: probable polyamine transporter At3g19553 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla016085Cla016085gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S2_0066670S2_0066670EST
S3_0090367S3_0090367EST
S3_0095686S3_0095686EST