WMU10416 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU10416
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Lipoxygenase
Location	Chr2 : 33492698 .. 33498148 (-)
Sequence length	600

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CATTAAAAAGCCAGAGAATGTCCTTTTAGATACCTTTCCTACACAGCTTCAAGCGACAAAAGTCACGGCGGTTCTGAACATATTGTCCAGTCATTCTCCAGATGAAGAGTATCTGGGAAAAGATATTGAACCAGCATGGGCTGATGAGCCTTTTATAAAAGGGAGCATTTGAGAAGTTCAGTGGAAAATTGAAGGAACTAGAAGGGATAATTGATGAAAGAAATGCTAACAAAAATCTAAAGAACAGACATGGAGCTGGGGTTGTGCCTTATCAACTTTTGAAGCCTGAATCAGAGCCTGGGGTGACAGGACAAGGAGTTCCTTACAGTATTTCTATTTAGAACCCATGACATATAGTTTTGATGTGGGTTCAATAACAATCTCACTTATGCTTAAAATAAAGACGAGATCATCCTAAAGAAAGAGTTGCGAGAATGTTGAATAATGTGTCCAAACCACTTGAAAGATTAAGGATAACAATGAAGTTTAATGTTTAATGATTGAGTTTATAGCTGAAGTGTAAGATTAAGATTACGCATATAGCTTGGTTTGTTCATAACATAATCATTTTAATGATGATTCAGAATACTGTTTGAAATT

Library


Library category	ESTs
watermelon fruit 10d library	2
watermelon fruit 18d library	1

Homology

[Close]

BLAST of WMU10416 vs. TAIR10
Match: AT3G45140.1 (AT3G45140.1 lipoxygenase 2)

HSP 1 Score: 89.7 bits (221), Expect = 2.1e-18
Identity = 44/58 (75.86%), Postives = 46/58 (79.31%), Query Frame = 3


Query: 165 AFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 224
           AFE+F GKL+ LEG+IDERN N  LKNR GAGVV Y+LLKP SE GVTG GVPYSISI
Sbjct: 839 AFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEHGVTGMGVPYSISI 896

Query: 225  284
           
Sbjct: 899  896

Query: 285  339
           
Sbjct: 959  896

HSP 2 Score: 67.0 bits (162), Expect = 1.5e-11
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 2


Query: 5   KKPENVLLDTFPTQLQATKVTAVLNILSSHSPDEEYLGKDIEPAWADEPFIKGSI*EVQW 64
           + PE VLL T+P+Q QAT V   L++LS+HSPDEEY+G+  E +WA+EP I  +    + 
Sbjct: 786 ESPEKVLLKTYPSQKQATLVMVTLDLLSTHSPDEEYIGEQQEASWANEPVINAAFERFKG 845

Query: 65  KIE 124
           K++
Sbjct: 846 KLQ 848

Query: 125  184
           
Sbjct: 906  848

Query: 185  194
           
Sbjct: 966  848

[Close]

BLAST of WMU10416 vs. TAIR10
Match: AT1G55020.1 (AT1G55020.1 lipoxygenase 1)

HSP 1 Score: 70.1 bits (170), Expect = 1.8e-12
Identity = 35/58 (60.34%), Postives = 41/58 (70.69%), Query Frame = 3


Query: 165 AFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 224
           AFEKF  K+KE+E  IDERN ++ LKNR G   +PY LL P SE GVTG+G+P S+SI
Sbjct: 802 AFEKFGEKVKEIEKNIDERNDDETLKNRTGLVKMPYTLLFPSSEGGVTGRGIPNSVSI 859

Query: 225  284
           
Sbjct: 862  859

Query: 285  339
           
Sbjct: 922  859

HSP 2 Score: 42.4 bits (98), Expect = 3.9e-04
Identity = 21/48 (43.75%), Postives = 25/48 (52.08%), Query Frame = 2


Query: 5   KKPENVLLDTFPTQLQATKVTAVLNILSSHSPDEEYLGKDIEPAWADE 64
           K P+ V L T   QLQ     +++ ILS+HS DE YLG+     WA E
Sbjct: 749 KNPDKVFLKTITAQLQTLLGISLIEILSTHSSDEVYLGQRDSKEWAAE 796

Query: 65   124
           
Sbjct: 809  796

Query: 125  149
           
Sbjct: 869  796

[Close]

BLAST of WMU10416 vs. TAIR10
Match: AT1G67560.1 (AT1G67560.1 PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 68.9 bits (167), Expect = 3.9e-12
Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 3


Query: 168 FEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 227
           F KFS +L ++E  I+ERN +K LKNR GAG+ PY+LL P S  GVTG+G+P SISI
Sbjct: 861 FNKFSEELVKIEKTINERNKDKKLKNRTGAGMPPYELLLPTSPHGVTGRGIPNSISI 917

Query: 228  287
           
Sbjct: 921  917

Query: 288  339
           
Sbjct: 981  917

HSP 2 Score: 50.1 bits (118), Expect = 1.9e-06
Identity = 27/56 (48.21%), Postives = 35/56 (62.50%), Query Frame = 2


Query: 2   IKKPENVLLDTFPTQLQATKVTAVLNILSSHSPDEEYL--GKDIEPAW-ADEPFIK 61
           ++ P+   L + PTQLQATKV AV   LS+HSPDEEYL   ++++  W  DE  +K
Sbjct: 804 MRNPQYSFLGSLPTQLQATKVMAVQETLSTHSPDEEYLIELREVQRHWFQDEQVVK 859

Query: 62   121
           
Sbjct: 864  859

Query: 122  161
           
Sbjct: 924  859

[Close]

BLAST of WMU10416 vs. TAIR10
Match: AT1G72520.1 (AT1G72520.1 PLAT/LH2 domain-containing lipoxygenase family protein)

HSP 1 Score: 65.1 bits (157), Expect = 5.6e-11
Identity = 31/58 (53.45%), Postives = 41/58 (70.69%), Query Frame = 3


Query: 165 AFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 224
           AF  FS ++  +E  ID+RN + + +NR GAGV+PY+L+ P SEPGVT +GVP S+SI
Sbjct: 869 AFYGFSAEIGRIEKEIDKRNRDPSRRNRCGAGVLPYELMAPSSEPGVTCRGVPNSVSI 926

Query: 225  284
           
Sbjct: 929  926

Query: 285  339
           
Sbjct: 989  926

HSP 2 Score: 47.0 bits (110), Expect = 1.6e-05
Identity = 20/45 (44.44%), Postives = 29/45 (64.44%), Query Frame = 2


Query: 2   IKKPENVLLDTFPTQLQATKVTAVLNILSSHSPDEEYLGKDIEPA 61
           I+ P+     + P+ LQ TK  AV++ LS+HSPDEEY+G+  +P+
Sbjct: 814 IEDPQKYFFSSMPSLLQTTKFMAVVDTLSTHSPDEEYIGERQQPS 858

Query: 62   121
           
Sbjct: 874  858

Query: 122  137
           
Sbjct: 934  858

[Close]

BLAST of WMU10416 vs. TAIR10
Match: AT1G17420.1 (AT1G17420.1 lipoxygenase 3)

HSP 1 Score: 64.7 bits (156), Expect = 7.4e-11
Identity = 31/58 (53.45%), Postives = 42/58 (72.41%), Query Frame = 3


Query: 165 AFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 224
           AF  F+ ++  +E  I++RNA+ + +NR GAGV+PY+LL P SEPGVT +GVP S+SI
Sbjct: 862 AFYGFAAEIGRIEKEIEKRNADPDRRNRCGAGVLPYELLVPSSEPGVTCRGVPNSVSI 919

Query: 225  284
           
Sbjct: 922  919

Query: 285  339
           
Sbjct: 982  919

HSP 2 Score: 43.9 bits (102), Expect = 1.3e-04
Identity = 19/45 (42.22%), Postives = 27/45 (60.00%), Query Frame = 2


Query: 2   IKKPENVLLDTFPTQLQATKVTAVLNILSSHSPDEEYLGKDIEPA 61
           I  PE     + P+  Q +K  AV++ LS+HSPDEEY+G+  +P+
Sbjct: 807 ISHPEKYYFSSMPSLAQTSKFMAVVDTLSTHSPDEEYIGERQQPS 851

Query: 62   121
           
Sbjct: 867  851

Query: 122  137
           
Sbjct: 927  851

[Close]

BLAST of WMU10416 vs. Swiss-Prot
Match: LOX21_SOLTU (Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 9.0e-19
Identity = 46/58 (79.31%), Postives = 49/58 (84.48%), Query Frame = 3


Query: 165 AFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 224
           AFE FSGKLKELEGIID RN +  L NR+GAGV+PY+LLKP SEPGVTG+GVPYSISI
Sbjct: 842 AFEVFSGKLKELEGIIDARNNDSKLSNRNGAGVMPYELLKPYSEPGVTGKGVPYSISI 899

Query: 225  284
           
Sbjct: 902  899

Query: 285  339
           
Sbjct: 962  899

HSP 2 Score: 75.5 bits (184), Expect = 7.4e-13
Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 2


Query: 2   IKKPENVLLDTFPTQLQATKVTAVLNILSSHSPDEEYLGKDIEPAWADEPFIKGS 61
           + KPE  LL  FP+Q+QATKV A+L++LS+HSPDEEY+G+ IEP WA++P I  +
Sbjct: 788 MNKPEEALLRCFPSQIQATKVMAILDVLSNHSPDEEYIGEKIEPYWAEDPVINAA 842

Query: 62   121
           
Sbjct: 848  842

Query: 122  167
           
Sbjct: 908  842

[Close]

BLAST of WMU10416 vs. Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 2.9e-17
Identity = 44/60 (73.33%), Postives = 47/60 (78.33%), Query Frame = 3


Query: 159 KGAFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 218
           K AFEKFSG+LKE EG ID RN N   KNR GAG+VPY+LLKP SEPGVTG+G+P SISI
Sbjct: 837 KAAFEKFSGRLKEAEGTIDMRNNNPENKNRCGAGIVPYELLKPFSEPGVTGRGIPNSISI 896

Query: 219  278
           
Sbjct: 897  896

Query: 279  338
           
Sbjct: 957  896

HSP 2 Score: 72.0 bits (175), Expect = 8.2e-12
Identity = 32/53 (60.38%), Postives = 39/53 (73.58%), Query Frame = 2


Query: 8   KPENVLLDTFPTQLQATKVTAVLNILSSHSPDEEYLGKDIEPAWADEPFIKGS 67
           +PE VLL + P+Q+QA KV A L+ILSSHSPDEEY+G+  EPAW  EP +K +
Sbjct: 787 RPEEVLLQSLPSQMQAIKVMATLDILSSHSPDEEYMGEYAEPAWLAEPMVKAA 839

Query: 68   127
           
Sbjct: 847  839

Query: 128  167
           
Sbjct: 907  839

[Close]

BLAST of WMU10416 vs. Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.8e-17
Identity = 44/58 (75.86%), Postives = 46/58 (79.31%), Query Frame = 3


Query: 165 AFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 224
           AFE+F GKL+ LEG+IDERN N  LKNR GAGVV Y+LLKP SE GVTG GVPYSISI
Sbjct: 839 AFERFKGKLQYLEGVIDERNVNITLKNRAGAGVVKYELLKPTSEHGVTGMGVPYSISI 896

Query: 225  284
           
Sbjct: 899  896

Query: 285  339
           
Sbjct: 959  896

HSP 2 Score: 67.0 bits (162), Expect = 2.6e-10
Identity = 30/63 (47.62%), Postives = 42/63 (66.67%), Query Frame = 2


Query: 5   KKPENVLLDTFPTQLQATKVTAVLNILSSHSPDEEYLGKDIEPAWADEPFIKGSI*EVQW 64
           + PE VLL T+P+Q QAT V   L++LS+HSPDEEY+G+  E +WA+EP I  +    + 
Sbjct: 786 ESPEKVLLKTYPSQKQATLVMVTLDLLSTHSPDEEYIGEQQEASWANEPVINAAFERFKG 845

Query: 65  KIE 124
           K++
Sbjct: 846 KLQ 848

Query: 125  184
           
Sbjct: 906  848

Query: 185  194
           
Sbjct: 966  848

[Close]

BLAST of WMU10416 vs. Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 1.5e-13
Identity = 34/60 (56.67%), Postives = 46/60 (76.67%), Query Frame = 3


Query: 159 KGAFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 218
           + A++ F+ +LKE+EG+ID RN ++ LKNR GAG++PYQL+KP S+ GVTG G+P S SI
Sbjct: 865 QAAYDGFAARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDSGVTGMGIPNSTSI 924

Query: 219  278
           
Sbjct: 925  924

Query: 279  338
           
Sbjct: 985  924

HSP 2 Score: 55.1 bits (131), Expect = 1.0e-06
Identity = 28/76 (36.84%), Postives = 43/76 (56.58%), Query Frame = 2


Query: 2   IKKPENVLLDTFPTQLQATKVTAVLNILSSHSPDEEYLGKDIEPAWADEPFIKGS----- 61
           +  P+  L + FP+Q+QAT V AVL++LSSHS DEEYLG +    W  +  ++ +     
Sbjct: 813 LDNPDQALRECFPSQVQATVVMAVLDVLSSHSTDEEYLGGEQTRPWNSDAAVQAAYDGFA 872

Query: 62  --I*EVQWKIEGTRRD 121
             + E++  I+G  +D
Sbjct: 873 ARLKEIEGVIDGRNKD 888

Query: 122  181
           
Sbjct: 933  888

Query: 182  209
           
Sbjct: 993  888

[Close]

BLAST of WMU10416 vs. Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 3.3e-13
Identity = 34/60 (56.67%), Postives = 45/60 (75.00%), Query Frame = 3


Query: 159 KGAFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 218
           + A+  F+ +LKE+EG+ID RN ++ LKNR GAG++PYQL+KP S+ GVTG G+P S SI
Sbjct: 882 QAAYAGFTARLKEIEGVIDGRNKDRKLKNRCGAGILPYQLMKPFSDAGVTGMGIPNSTSI 941

Query: 219  278
           
Sbjct: 942  941

Query: 279  338
           
Sbjct: 1002  941

HSP 2 Score: 53.9 bits (128), Expect = 2.3e-06
Identity = 27/76 (35.53%), Postives = 43/76 (56.58%), Query Frame = 2


Query: 2   IKKPENVLLDTFPTQLQATKVTAVLNILSSHSPDEEYLGKDIEPAWADEPFIKGS----- 61
           +  P+  L + FP+Q+QAT V AVL++LS+HS DEEYLG +    W  +  ++ +     
Sbjct: 830 LDNPDQALRECFPSQVQATVVMAVLDVLSTHSTDEEYLGGEQTRPWNSDAAVQAAYAGFT 889

Query: 62  --I*EVQWKIEGTRRD 121
             + E++  I+G  +D
Sbjct: 890 ARLKEIEGVIDGRNKD 905

Query: 122  181
           
Sbjct: 950  905

Query: 182  209
           
Sbjct: 1010  905

[Close]

BLAST of WMU10416 vs. TrEMBL
Match: A0A125S6K7_CUCME (Lipoxygenase OS=Cucumis melo var. makuwa GN=LOX10 PE=2 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 9.4e-23
Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 3


Query: 159 KGAFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 218
           KGAFEKFSGKLKELEGIIDERNA++NLKNRHGAGV PY+LLKPES PGVTGQGVPYSISI
Sbjct: 843 KGAFEKFSGKLKELEGIIDERNADRNLKNRHGAGVAPYRLLKPESGPGVTGQGVPYSISI 902

Query: 219  278
           
Sbjct: 903  902

Query: 279  338
           
Sbjct: 963  902

[Close]

BLAST of WMU10416 vs. TrEMBL
Match: A0A125S6K7_CUCME (Lipoxygenase OS=Cucumis melo var. makuwa GN=LOX10 PE=2 SV=1)

HSP 1 Score: 104.8 bits (260), Expect = 1.3e-19
Identity = 50/64 (78.12%), Postives = 57/64 (89.06%), Query Frame = 2


Query: 2   IKKPENVLLDTFPTQLQATKVTAVLNILSSHSPDEEYLGKDIEPAWADEPFIKGSI*EVQ 61
           I KPE+VLL+TFPTQLQATKVTAVLNILSSHSPDEEY+GKDIE AWADEPFIKG+  +  
Sbjct: 791 INKPEHVLLETFPTQLQATKVTAVLNILSSHSPDEEYMGKDIEAAWADEPFIKGAFEKFS 850

Query: 62  WKIE 121
            K++
Sbjct: 851 GKLK 854

Query: 122  181
           
Sbjct: 911  854

Query: 182  194
           
Sbjct: 971  854

HSP 2 Score: 114.4 bits (285), Expect = 1.6e-22
Identity = 55/60 (91.67%), Postives = 57/60 (95.00%), Query Frame = 3


Query: 159 KGAFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 218
           +GAFEKF GKLKELEGIIDERNANKNLKNRHGAGV PY+LLK ESEPGVTGQGVPYSISI
Sbjct: 460 EGAFEKFRGKLKELEGIIDERNANKNLKNRHGAGVAPYRLLKSESEPGVTGQGVPYSISI 519

Query: 219  278
           
Sbjct: 520  519

Query: 279  338
           
Sbjct: 580  519

[Close]

BLAST of WMU10416 vs. TrEMBL
Match: A0A067ERI5_CITSI (Lipoxygenase OS=Citrus sinensis GN=CISIN_1g002644mg PE=3 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.5e-20
Identity = 51/60 (85.00%), Postives = 57/60 (95.00%), Query Frame = 3


Query: 159 KGAFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 218
           K AFE+FSG+LKELEGIIDERNAN+NLKNR GAG+VPY+L+KP SEPGVTGQGVPYSISI
Sbjct: 838 KAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVPYSISI 897

Query: 219  278
           
Sbjct: 898  897

Query: 279  338
           
Sbjct: 958  897

[Close]

BLAST of WMU10416 vs. TrEMBL
Match: A0A067ERI5_CITSI (Lipoxygenase OS=Citrus sinensis GN=CISIN_1g002644mg PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.5e-12
Identity = 35/55 (63.64%), Postives = 45/55 (81.82%), Query Frame = 2


Query: 2   IKKPENVLLDTFPTQLQATKVTAVLNILSSHSPDEEYLGKDIEPAWADEPFIKGS 61
           ++KPE+VLL  FP+Q+QAT V A+L+ LSSHSPDEEYLGK +E AW D+P IK +
Sbjct: 786 LEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAA 840

Query: 62   121
           
Sbjct: 846  840

Query: 122  167
           
Sbjct: 906  840

HSP 2 Score: 107.8 bits (268), Expect = 1.5e-20
Identity = 51/60 (85.00%), Postives = 57/60 (95.00%), Query Frame = 3


Query: 159 KGAFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 218
           K AFE+FSG+LKELEGIIDERNAN+NLKNR GAG+VPY+L+KP SEPGVTGQGVPYSISI
Sbjct: 743 KAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVPYSISI 802

Query: 219  278
           
Sbjct: 803  802

Query: 279  338
           
Sbjct: 863  802

[Close]

BLAST of WMU10416 vs. TrEMBL
Match: A0A067EZW7_CITSI (Lipoxygenase OS=Citrus sinensis GN=CISIN_1g002644mg PE=3 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.5e-12
Identity = 35/55 (63.64%), Postives = 45/55 (81.82%), Query Frame = 2


Query: 2   IKKPENVLLDTFPTQLQATKVTAVLNILSSHSPDEEYLGKDIEPAWADEPFIKGS 61
           ++KPE+VLL  FP+Q+QAT V A+L+ LSSHSPDEEYLGK +E AW D+P IK +
Sbjct: 691 LEKPEDVLLQCFPSQIQATTVMAILDTLSSHSPDEEYLGKQMEQAWGDDPVIKAA 745

Query: 62   121
           
Sbjct: 751  745

Query: 122  167
           
Sbjct: 811  745

HSP 2 Score: 107.8 bits (268), Expect = 1.5e-20
Identity = 51/60 (85.00%), Postives = 57/60 (95.00%), Query Frame = 3


Query: 159 KGAFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 218
           K AFE+FSG+LKELEGIIDERNAN+NLKNR GAG+VPY+L+KP SEPGVTGQGVPYSISI
Sbjct: 608 KAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVPYSISI 667

Query: 219  278
           
Sbjct: 668  667

Query: 279  338
           
Sbjct: 728  667

[Close]

BLAST of WMU10416 vs. NCBI nr
Match: gi|778693116|ref|XP_004142135.2| (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis sativus])

HSP 1 Score: 117.5 bits (293), Expect = 2.7e-23
Identity = 56/60 (93.33%), Postives = 57/60 (95.00%), Query Frame = 3


Query: 159 KGAFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 218
           KGAFEKF GKLKELEGIIDERNANKNLKNRHGAGV PY+LLK ESEPGVTGQGVPYSISI
Sbjct: 843 KGAFEKFRGKLKELEGIIDERNANKNLKNRHGAGVAPYRLLKSESEPGVTGQGVPYSISI 902

Query: 219  278
           
Sbjct: 903  902

Query: 279  338
           
Sbjct: 963  902

[Close]

BLAST of WMU10416 vs. NCBI nr
Match: gi|987644663|gb|AME15768.1| (lipoxygenase 10 [Cucumis melo var. makuwa])

HSP 1 Score: 116.7 bits (291), Expect = 4.6e-23
Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 3


Query: 159 KGAFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 218
           KGAFEKFSGKLKELEGIIDERNA++NLKNRHGAGV PY+LLKPES PGVTGQGVPYSISI
Sbjct: 843 KGAFEKFSGKLKELEGIIDERNADRNLKNRHGAGVAPYRLLKPESGPGVTGQGVPYSISI 902

Query: 219  278
           
Sbjct: 903  902

Query: 279  338
           
Sbjct: 963  902

[Close]

BLAST of WMU10416 vs. NCBI nr
Match: gi|659097665|ref|XP_008449747.1| (PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo])

HSP 1 Score: 116.7 bits (291), Expect = 4.6e-23
Identity = 55/60 (91.67%), Postives = 58/60 (96.67%), Query Frame = 3


Query: 159 KGAFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 218
           KGAFEKFSGKLKELEGIIDERNA++NLKNRHGAGV PY+LLKPES PGVTGQGVPYSISI
Sbjct: 843 KGAFEKFSGKLKELEGIIDERNADRNLKNRHGAGVAPYRLLKPESGPGVTGQGVPYSISI 902

Query: 219  278
           
Sbjct: 903  902

Query: 279  338
           
Sbjct: 963  902

[Close]

BLAST of WMU10416 vs. NCBI nr
Match: gi|700198983|gb|KGN54141.1| (hypothetical protein Csa_4G288610 [Cucumis sativus])

HSP 1 Score: 115.9 bits (289), Expect = 7.9e-23
Identity = 55/60 (91.67%), Postives = 57/60 (95.00%), Query Frame = 3


Query: 159 KGAFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 218
           +GAFEKF GKLKELEGIIDERNANKNLKNRHGAGV PY+LLK ESEPGVTGQGVPYSISI
Sbjct: 460 EGAFEKFRGKLKELEGIIDERNANKNLKNRHGAGVAPYRLLKSESEPGVTGQGVPYSISI 519

Query: 219  278
           
Sbjct: 520  519

Query: 279  338
           
Sbjct: 580  519

[Close]

BLAST of WMU10416 vs. NCBI nr
Match: gi|641837553|gb|KDO56506.1| (hypothetical protein CISIN_1g002644mg [Citrus sinensis])

HSP 1 Score: 109.4 bits (272), Expect = 7.4e-21
Identity = 51/60 (85.00%), Postives = 57/60 (95.00%), Query Frame = 3


Query: 159 KGAFEKFSGKLKELEGIIDERNANKNLKNRHGAGVVPYQLLKPESEPGVTGQGVPYSISI 218
           K AFE+FSG+LKELEGIIDERNAN+NLKNR GAG+VPY+L+KP SEPGVTGQGVPYSISI
Sbjct: 743 KAAFERFSGRLKELEGIIDERNANENLKNRTGAGMVPYELMKPFSEPGVTGQGVPYSISI 802

Query: 219  278
           
Sbjct: 803  802

Query: 279  338
           
Sbjct: 863  802

The following BLAST results are available for this feature:

BLAST of WMU10416 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G45140.1	2.1e-18	75.86	lipoxygenase 2	[more]
AT1G55020.1	1.8e-12	60.34	lipoxygenase 1	[more]
AT1G67560.1	3.9e-12	59.65	PLAT/LH2 domain-containing lipoxygenase family protein	[more]
AT1G72520.1	5.6e-11	53.45	PLAT/LH2 domain-containing lipoxygenase family protein	[more]
AT1G17420.1	7.4e-11	53.45	lipoxygenase 3	[more]

BLAST of WMU10416 vs. Swiss-Prot


Match Name	E-value	Identity	Description
LOX21_SOLTU	9.0e-19	79.31	Linoleate 13S-lipoxygenase 2-1, chloroplastic OS=Solanum tuberosum GN=LOX2.1 PE=...	[more]
LOX23_HORVU	2.9e-17	73.33	Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1	[more]
LOX2_ARATH	3.8e-17	75.86	Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1	[more]
LOXC1_ORYSJ	1.5e-13	56.67	Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV...	[more]
LOXC2_ORYSJ	3.3e-13	56.67	Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX...	[more]

BLAST of WMU10416 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A125S6K7_CUCME	9.4e-23	91.67	Lipoxygenase OS=Cucumis melo var. makuwa GN=LOX10 PE=2 SV=1	[more]
A0A125S6K7_CUCME	1.3e-19	78.13	Lipoxygenase OS=Cucumis melo var. makuwa GN=LOX10 PE=2 SV=1	[more]
A0A067ERI5_CITSI	1.5e-20	85.00	Lipoxygenase OS=Citrus sinensis GN=CISIN_1g002644mg PE=3 SV=1	[more]
A0A067ERI5_CITSI	7.5e-12	63.64	Lipoxygenase OS=Citrus sinensis GN=CISIN_1g002644mg PE=3 SV=1	[more]
A0A067EZW7_CITSI	7.5e-12	63.64	Lipoxygenase OS=Citrus sinensis GN=CISIN_1g002644mg PE=3 SV=1	[more]

BLAST of WMU10416 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778693116\|ref\|XP_004142135.2\|	2.7e-23	93.33	PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis sativus]	[more]
gi\|987644663\|gb\|AME15768.1\|	4.6e-23	91.67	lipoxygenase 10 [Cucumis melo var. makuwa]	[more]
gi\|659097665\|ref\|XP_008449747.1\|	4.6e-23	91.67	PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Cucumis melo]	[more]
gi\|700198983\|gb\|KGN54141.1\|	7.9e-23	91.67	hypothetical protein Csa_4G288610 [Cucumis sativus]	[more]
gi\|641837553\|gb\|KDO56506.1\|	7.4e-21	85.00	hypothetical protein CISIN_1g002644mg [Citrus sinensis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition
IPR000907	LipOase
IPR013819	LipOase_C

Vocabulary: **Molecular Function**
Term	Definition
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0046872	metal ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

GO Annotation

GO Assignments

This transcribed_cluster is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla008521	Cla008521	gene
Cla008520	Cla008520	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S1_0054652	S1_0054652	EST
S1_0154476	S1_0154476	EST
S2_0074839	S2_0074839	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000907	Lipoxygenase	PANTHER	PTHR11771	LIPOXYGENASE	coord: 2..113 score: 1.3
IPR013819	Lipoxygenase, C-terminal	PFAM	PF00305	Lipoxygenase	coord: 3..96 score: 7.9
IPR013819	Lipoxygenase, C-terminal	PROFILE	PS51393	LIPOXYGENASE_3	coord: 1..113 score: 42
IPR013819	Lipoxygenase, C-terminal	unknown	SSF48484	Lipoxigenase	coord: 3..113 score: 1.31
None	No IPR available	GENE3D	G3DSA:1.20.245.10		coord: 3..113 score: 1.8
None	No IPR available	PANTHER	PTHR11771:SF51	SUBFAMILY NOT NAMED	coord: 2..113 score: 1.3