WMU09370 (transcribed_cluster) Watermelon (97103) v1

NameWMU09370
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionAldolase like protein
LocationChr10 : 1471767 .. 1472037 (-)
Sequence length270
The following sequences are available for this feature:

transcribed_cluster sequence

CGAAGGCTATTTGACTAACTACGAGGACGAATTGCTGATTATGTGTCAGGTGGAATCGGAGCAAGCAGTGAAGAGATAGATGAGATAATGGAAGTGATGGGGTTGATTGTATTCAAATGGGGCCATTGGATATGAGTGGAAGTATGGGGATATCTATGGGGACCCTGGCCATAAGAAGGTGAAGGAGGTGATGAGAAAGGCAAAGAAGGCTGTTTTGGAGAGCAAAATTGAAGATGGCGGAAAGGGTGCGTTTCTGGCTGGTTTCTCAAT
BLAST of WMU09370 vs. TrEMBL
Match: A0A0A0L3Q7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002930 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 3.7e-11
Identity = 47/96 (48.96%), Postives = 55/96 (57.29%), Query Frame = 2

Query: 2   EGYLTNYEDELLIMCQVESEQAVKR*MR*WK-------*WG*LYSNGAIGYEWKYGDIYG 61
           EGYLTNYEDELLIMCQVESEQAVK+     +         G L  +G++GY W       
Sbjct: 209 EGYLTNYEDELLIMCQVESEQAVKKIDEIMEVDGVDCIQMGPLDMSGSMGYLW------- 268

Query: 62  DPGHXXXXXXXXXXXXXXLESKIEDGGKGAFLAGFS 121
           DPGH              LES+IE+G KG+FL GFS
Sbjct: 269 DPGHKKVKELMRKAEMAVLESQIENGEKGSFLCGFS 297

Query: 122 181
           
Sbjct: 329 297

Query: 182 241
           
Sbjct: 389 297

Query: 242 269
           
Sbjct: 449 297

BLAST of WMU09370 vs. NCBI nr
Match: gi|449456787|ref|XP_004146130.1| (PREDICTED: uncharacterized protein LOC101213205 [Cucumis sativus])

HSP 1 Score: 79.0 bits (193), Expect = 4.8e-12
Identity = 47/96 (48.96%), Postives = 55/96 (57.29%), Query Frame = 2

Query: 2   EGYLTNYEDELLIMCQVESEQAVKR*MR*WK-------*WG*LYSNGAIGYEWKYGDIYG 61
           EGYLTNYEDELLIMCQVESEQAVK+     +         G L  +G++GY W       
Sbjct: 209 EGYLTNYEDELLIMCQVESEQAVKKIDEIMEVDGVDCIQMGPLDMSGSMGYLW------- 268

Query: 62  DPGHXXXXXXXXXXXXXXLESKIEDGGKGAFLAGFS 121
           DPGH              LES+IE+G KG+FL GFS
Sbjct: 269 DPGHKKVKELMRKAEMAVLESQIENGEKGSFLCGFS 297

Query: 122 181
           
Sbjct: 329 297

Query: 182 241
           
Sbjct: 389 297

Query: 242 269
           
Sbjct: 449 297

BLAST of WMU09370 vs. NCBI nr
Match: gi|659095423|ref|XP_008448571.1| (PREDICTED: uncharacterized protein LOC103490709 [Cucumis melo])

HSP 1 Score: 75.9 bits (185), Expect = 4.1e-11
Identity = 46/96 (47.92%), Postives = 54/96 (56.25%), Query Frame = 2

Query: 2   EGYLTNYEDELLIMCQVESEQAVKR*MR*WK-------*WG*LYSNGAIGYEWKYGDIYG 61
           EGYLT YEDELLIMCQVESEQAVK+     +         G L  +G++GY W       
Sbjct: 209 EGYLTYYEDELLIMCQVESEQAVKKIDEIMEVDGVDCIQMGPLDMSGSMGYLW------- 268

Query: 62  DPGHXXXXXXXXXXXXXXLESKIEDGGKGAFLAGFS 121
           DPGH              LES+IE+G KG+FL GFS
Sbjct: 269 DPGHKKVKEVMRKAEMAVLESQIENGQKGSFLCGFS 297

Query: 122 181
           
Sbjct: 329 297

Query: 182 241
           
Sbjct: 389 297

Query: 242 269
           
Sbjct: 449 297

BLAST of WMU09370 vs. NCBI nr
Match: gi|255587508|ref|XP_002534296.1| (PREDICTED: 2-keto-3-deoxy-L-rhamnonate aldolase [Ricinus communis])

HSP 1 Score: 59.3 bits (142), Expect = 3.9e-06
Identity = 41/96 (42.71%), Postives = 48/96 (50.00%), Query Frame = 2

Query: 2   EGYLTNYEDELLIMCQVESEQAVKR*MR*WK-------*WG*LYSNGAIGYEWKYGDIYG 61
           EGYL+NY DELLIMCQVESE+ VK+               G L  + ++GY W       
Sbjct: 209 EGYLSNYGDELLIMCQVESEEGVKKADEIAAVDGVDCIQMGPLDLSASMGYLW------- 268

Query: 62  DPGHXXXXXXXXXXXXXXLESKIEDGGKGAFLAGFS 121
           DPGH              L SK   GG GA+LAGFS
Sbjct: 269 DPGHKKVREMMRAAEKAVLGSK--KGGGGAYLAGFS 295

Query: 122 181
           
Sbjct: 329 295

Query: 182 241
           
Sbjct: 389 295

Query: 242 269
           
Sbjct: 449 295

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L3Q7_CUCSA3.7e-1148.96Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002930 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|449456787|ref|XP_004146130.1|4.8e-1248.96PREDICTED: uncharacterized protein LOC101213205 [Cucumis sativus][more]
gi|659095423|ref|XP_008448571.1|4.1e-1147.92PREDICTED: uncharacterized protein LOC103490709 [Cucumis melo][more]
gi|255587508|ref|XP_002534296.1|3.9e-0642.71PREDICTED: 2-keto-3-deoxy-L-rhamnonate aldolase [Ricinus communis][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla008883Cla008883gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0118254S1_0118254EST
S2_0016979S2_0016979EST