WMU09043 (transcribed_cluster) Watermelon (97103) v1

Overview
NameWMU09043
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionVacuolar protein sorting-associated protein 20 like 2
LocationChr4 : 4404131 .. 4415946 (-)
Sequence length424
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

ACGTCAGTAAGTTGGTCCGTTTAACGGCCGGGGAAAAAAATTCCCTCTATTCTCTCAATCTTCAGTTGGTCACTCCGTTGATTCTTCATCCGTCAAGGAATCAAAGACGAAGAATGGGGGATTGACGGATCTGTGCTGCTCAATCCCTCTGCTGAGACAGTCTATCATAATTACCCCAAAGTTGAAAAAATCAAAAGTGCTCGGCATTCCAATTGGGAGAAGTAGATGGGGAATTTATTCGTCAAGAAGCCCAAAGTCACCGACGTTGATAAAGCGATTCTGTCTCTCAAGACCCCAAAGACGCAAAACTCGGTCAATATCAACAACAGCTTGATGCCGTCATTGAAGCAGAAAAGATGCTGCAAGAGAGTTAGTTCGACAAAAAGAAAAGGATCGTGCCTTGTTAGCCTTGAAGAAGAAAAAG
Homology
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BLAST of WMU09043 vs. TAIR10
Match: AT5G09260.1 (AT5G09260.1 vacuolar protein sorting-associated protein 20.2)

HSP 1 Score: 48.9 bits (115), Expect = 3.0e-06
Identity = 26/66 (39.39%), Postives = 39/66 (59.09%), Query Frame = 1 

Query: 226 MGNLFVKKPKVTDVDKAILSLKTPKTQNSVNINNSLMPSLKQKRCCKRVSSTKRKGSCLV 285
           MGNLFVKKPK+T+VD+AILSLKT + +              +K+  + +   KRK   L+
Sbjct: 1   MGNLFVKKPKITEVDRAILSLKTQRRKLGQYQQQLEKVIEAEKQAARDLIREKRKDRALL 60

Query: 286 SLEEEK 345
           +L++++
Sbjct: 61  ALKKKR 66

Query: 346  405
           
Sbjct: 121  66

Query: 406  424
           
Sbjct: 181  66

The following BLAST results are available for this feature:
BLAST of WMU09043 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G09260.13.0e-0639.39 vacuolar protein sorting-associated protein 20.2[more]
BLAST of WMU09043 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla011622Cla011622gene
Cla011623Cla011623gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0106047S1_0106047EST
S2_0131421S2_0131421EST