WMU07854 (transcribed_cluster) Watermelon (97103) v1

NameWMU07854
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionUnknown protein
LocationChr5 : 2991561 .. 2991745 (+)
Sequence length211
The following sequences are available for this feature:

transcribed_cluster sequence

GGTTATGAAGAAGTAAGCATGTGTTAGCCAAAGATTTGTCATGTTATCTCATAAAATAAGGATGTATGCCTCGCAACCAAGAACCCGATCGTGGGTAACCTCATTTACGACGGCATCACTTGCATAATACCAAACAGAAGCATCTTCCTCAGCTTCCCCACTTGTCTCCTCCTTCCTTCGTTTGTCCCCCCTCCCCTTCCTACCGTAACGT
BLAST of WMU07854 vs. TrEMBL
Match: A0A0A0L9E4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G130860 PE=3 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 1.2e-09
Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = -2

Query: 58  EETSGEAEEDASVWYYASDAVVNEVTHDRVLGCEAYIL 117
           + +SGEAEEDASVWYYASDAVV+EVT DRVLGCEAYIL
Sbjct: 938 KRSSGEAEEDASVWYYASDAVVDEVTLDRVLGCEAYIL 975

Query: 118 172
           
Sbjct: 998 975

BLAST of WMU07854 vs. NCBI nr
Match: gi|659075844|ref|XP_008438362.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Cucumis melo])

HSP 1 Score: 71.6 bits (174), Expect = 6.0e-10
Identity = 34/38 (89.47%), Postives = 36/38 (94.74%), Query Frame = -2

Query: 58  EETSGEAEEDASVWYYASDAVVNEVTHDRVLGCEAYIL 117
           + +SGEAEEDASVWYYASDAVVNEVT DRVLGCEAYIL
Sbjct: 937 KRSSGEAEEDASVWYYASDAVVNEVTLDRVLGCEAYIL 974

Query: 118 172
           
Sbjct: 997 974

BLAST of WMU07854 vs. NCBI nr
Match: gi|449433181|ref|XP_004134376.1| (PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Cucumis sativus])

HSP 1 Score: 69.7 bits (169), Expect = 2.3e-09
Identity = 33/38 (86.84%), Postives = 36/38 (94.74%), Query Frame = -2

Query: 58  EETSGEAEEDASVWYYASDAVVNEVTHDRVLGCEAYIL 117
           + +SGEAEEDASVWYYASDAVV+EVT DRVLGCEAYIL
Sbjct: 938 KRSSGEAEEDASVWYYASDAVVDEVTLDRVLGCEAYIL 975

Query: 118 172
           
Sbjct: 998 975

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0L9E4_CUCSA1.2e-0986.84Uncharacterized protein OS=Cucumis sativus GN=Csa_3G130860 PE=3 SV=1[more]
Match NameE-valueIdentityDescription
gi|659075844|ref|XP_008438362.1|6.0e-1089.47PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Cucumis melo][more]
gi|449433181|ref|XP_004134376.1|2.3e-0986.84PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla021416Cla021416gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0065951S1_0065951EST
S2_0020279S2_0020279EST