WMU07768 (transcribed_cluster) Watermelon (97103) v1

NameWMU07768
Typetranscribed_cluster
OrganismCitrullus. lanatus (Watermelon (97103) v1)
DescriptionProtein phosphatase-2c, putative
LocationChr11 : 6146628 .. 6147093 (-)
Sequence length470
The following sequences are available for this feature:

transcribed_cluster sequence

AGGATGGAAGTGATGAAGAAGAAGATTGAATTCGAAGGAGGAAGAACATTCAGAAATGGGAATAGAATGGTCTGCCCTGGAAGGAGTGTCGCGCGTAAACACTTTGGTAACCCTGCCAAGATTCGATCCTGGAAAAGAAGATAAGAAAGGGCAGAAGTAATGAGGAGTACAGAAGGATTCATGGGTGCCTTGTTTTGGTAAAAATGTTATTATCTTTCCTTTTTCTTGCTTCTGTTCATCTTTTCTGTAGGATAAGAAAAGTTATAAAAAATTGAAGTTGAGAGAGGTCGGCCCAGCCTTATTAGTGCGTCTGGGGAATTGTAGACACTCTCGTATCGGTAGAAATTGAGTTTTGTAGAATCTGATGGGGACCGACTTGCCGTCCTTTATTGTACTCATGAATTTTCTTGTATGAATCGTTTGTTATTTGTAATGTTAATAAATTTTGTGATTGTAAAGCCCTTCTAGAT
BLAST of WMU07768 vs. TrEMBL
Match: A0A0A0LHU4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_2G099470 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-07
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 2

Query: 35  KEEEHSEMGIEWSALEGVSRVNTLVTLPRFDP 94
           KEEEHSE GIEWSALEGVSRVNTLVTLPRF+P
Sbjct: 444 KEEEHSETGIEWSALEGVSRVNTLVTLPRFNP 475

Query: 95  131
           
Sbjct: 504 475

BLAST of WMU07768 vs. NCBI nr
Match: gi|659082212|ref|XP_008441722.1| (PREDICTED: probable protein phosphatase 2C 33 [Cucumis melo])

HSP 1 Score: 66.2 bits (160), Expect = 5.6e-08
Identity = 30/33 (90.91%), Postives = 32/33 (96.97%), Query Frame = 2

Query: 32  SKEEEHSEMGIEWSALEGVSRVNTLVTLPRFDP 91
           +KEEEHSE GIEWSALEGVSRVNTLVTLPRF+P
Sbjct: 444 TKEEEHSETGIEWSALEGVSRVNTLVTLPRFNP 476

Query: 92  131
           
Sbjct: 504 476

BLAST of WMU07768 vs. NCBI nr
Match: gi|449442279|ref|XP_004138909.1| (PREDICTED: probable protein phosphatase 2C 33 [Cucumis sativus])

HSP 1 Score: 65.5 bits (158), Expect = 9.6e-08
Identity = 30/32 (93.75%), Postives = 31/32 (96.88%), Query Frame = 2

Query: 35  KEEEHSEMGIEWSALEGVSRVNTLVTLPRFDP 94
           KEEEHSE GIEWSALEGVSRVNTLVTLPRF+P
Sbjct: 444 KEEEHSETGIEWSALEGVSRVNTLVTLPRFNP 475

Query: 95  131
           
Sbjct: 504 475

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
A0A0A0LHU4_CUCSA1.1e-0793.75Uncharacterized protein OS=Cucumis sativus GN=Csa_2G099470 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
gi|659082212|ref|XP_008441722.1|5.6e-0890.91PREDICTED: probable protein phosphatase 2C 33 [Cucumis melo][more]
gi|449442279|ref|XP_004138909.1|9.6e-0893.75PREDICTED: probable protein phosphatase 2C 33 [Cucumis sativus][more]

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
Cla004138Cla004138gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
S1_0063419S1_0063419EST
S2_0099092S2_0099092EST
S4_0114633S4_0114633EST