WMU07629 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU07629
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Senescence/dehydration-associated-like protein
Location	Chr10 : 1667809 .. 1670213 (+)
Sequence length	557

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

TGGAATGCTTCCCGGGGAAATTGTACTAGCTTCTCTTGATGGATTTAGGCAAAAGTTTTTGATGCTGTTGAAGTTGCTGGAAAAAATGTCATGGCTACATCTTCCACTGTGACAACTGAACTTGTGACCAAAAGGTAATGGTGAACAAGCTGCGAATGCAACCAATGAAGGCCTTGATGCTGCTGGACATGCTGTCGGGACAGCATGGGCTGCTATGAAGATTCGAAAAGCTCTGAATCCGAAAAGTGCTCTCACACCGACCACTTTTAGCAAAATCCGCTGTTAAAGCCGCAGCTGCAGAGGCAAAGGCTAAGAACTCCAAGTAAATTGTTTGGAATGATTTGTTATTAACTAATAGTAGGCCAACTTTATGATGGGCAGCCCACTGTGTAGGTAGGACAAAAGCTTTCCAAAATCATTTTCTTGAAGATAAAACATCCCTCAGGATCTTCGTCCATCAGCAGCTTGATCTGGGGTTGCTTTTAATGCTTTGTAATATAGAATATTTTTCAGATGATTGTGGTATAATATTGTAGATAGTGGGTTTTGGACATAAC

Library


Library category	ESTs
watermelon fruit 10d library	1
watermelon fruit 26d library	1

Homology

[Close]

BLAST of WMU07629 vs. TAIR10
Match: AT2G17840.1 (AT2G17840.1 Senescence/dehydration-associated protein-related)

HSP 1 Score: 56.2 bits (134), Expect = 2.4e-08
Identity = 35/90 (38.89%), Postives = 41/90 (45.56%), Query Frame = 2


Query: 5   MLPGEIVLASLDGFRQKFXXXXXXXXXXXXXXXXXXXXXXXPKGNGEQAANATNEGLDXX 64
           +LPGE++LASLDGF +                          K  G+ AA ATNEGLD  
Sbjct: 352 LLPGEVILASLDGFNKVCDAVEVAGRNVMSTSSTVTTELVDHKYGGK-AAEATNEGLDAA 411

Query: 65  XXXXXXXXXXMKIRKALNPKSALTPTTFSK 124
                      KIRKA+NPKS L P+T +K
Sbjct: 412 GYALGTAWVAFKIRKAINPKSVLKPSTLAK 440

Query: 125  184
           
Sbjct: 472  440

Query: 185  244
           
Sbjct: 532  440

Query: 245  275
           
Sbjct: 592  440

[Close]

BLAST of WMU07629 vs. TAIR10
Match: AT3G51250.1 (AT3G51250.1 Senescence/dehydration-associated protein-related)

HSP 1 Score: 55.1 bits (131), Expect = 5.4e-08
Identity = 35/91 (38.46%), Postives = 40/91 (43.96%), Query Frame = 2


Query: 2   GMLPGEIVLASLDGFRQKFXXXXXXXXXXXXXXXXXXXXXXXPKGNGEQAANATNEGLDX 61
           G+LPGEIVLASLDGF  K                            G +AA ATNEGLD 
Sbjct: 362 GLLPGEIVLASLDGF-SKICDAVEVAGKNVMSTSSTVTTELVNHRYGTKAAEATNEGLDA 421

Query: 62  XXXXXXXXXXXMKIRKALNPKSALTPTTFSK 121
                       KIRKA NPK+ + P++ +K
Sbjct: 422 AGHAFGTAWVAFKIRKAFNPKNVIKPSSLAK 451

Query: 122  181
           
Sbjct: 482  451

Query: 182  241
           
Sbjct: 542  451

Query: 242  275
           
Sbjct: 602  451

[Close]

BLAST of WMU07629 vs. TAIR10
Match: AT4G35985.1 (AT4G35985.1 Senescence/dehydration-associated protein-related)

HSP 1 Score: 51.6 bits (122), Expect = 6.0e-07
Identity = 33/91 (36.26%), Postives = 41/91 (45.05%), Query Frame = 2


Query: 2   GMLPGEIVLASLDGFRQKFXXXXXXXXXXXXXXXXXXXXXXXPKGNGEQAANATNEGLDX 61
           G+LPGE+VLA+LDGF +                          K  G + A ATNEGL  
Sbjct: 341 GLLPGEMVLATLDGFNKVCDAVEVAGRHVMKTTSDVTTEIVDHK-YGAKTAQATNEGLSA 400

Query: 62  XXXXXXXXXXXMKIRKALNPKSALTPTTFSK 121
                       KIR+ALNPKSA+ P++ +K
Sbjct: 401 AGHAFGTAWTVFKIRQALNPKSAMKPSSLAK 430

Query: 122  181
           
Sbjct: 461  430

Query: 182  241
           
Sbjct: 521  430

Query: 242  275
           
Sbjct: 581  430

[Close]

BLAST of WMU07629 vs. TrEMBL
Match: A0A0A0L4X4_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002720 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 3.2e-09
Identity = 44/91 (48.35%), Postives = 48/91 (52.75%), Query Frame = 2


Query: 2   GMLPGEIVLASLDGFRQKFXXXXXXXXXXXXXXXXXXXXXXXPKGNGEQAANATNEGLDX 61
           GMLPGEIVLASLDGF + F                        K  GEQAANATNEGLD 
Sbjct: 363 GMLPGEIVLASLDGFGKVFDAVEVAGKNVMATSSTVTTELVT-KRYGEQAANATNEGLDA 422

Query: 62  XXXXXXXXXXXMKIRKALNPKSALTPTTFSK 121
                      +KIRKALNPKSAL+P   +K
Sbjct: 423 AGHAVGTAWAALKIRKALNPKSALSPKALAK 452

Query: 122  181
           
Sbjct: 483  452

Query: 182  241
           
Sbjct: 543  452

Query: 242  275
           
Sbjct: 603  452

[Close]

BLAST of WMU07629 vs. TrEMBL
Match: V9M4U9_MANES (Drought-inducible protein OS=Manihot esculenta GN=ERD7 PE=2 SV=1)

HSP 1 Score: 63.2 bits (152), Expect = 3.9e-07
Identity = 40/91 (43.96%), Postives = 45/91 (49.45%), Query Frame = 2


Query: 2   GMLPGEIVLASLDGFRQKFXXXXXXXXXXXXXXXXXXXXXXXPKGNGEQAANATNEGLDX 61
           G+LPGEIVLASLDGF  K                            GEQAA ATNEGLD 
Sbjct: 361 GLLPGEIVLASLDGF-SKMCDAAEVAGKNVMSTSSTVTTDLVNHRYGEQAAEATNEGLDA 420

Query: 62  XXXXXXXXXXXMKIRKALNPKSALTPTTFSK 121
                       K+RKALNPKSAL P++ +K
Sbjct: 421 AGHAMGTALAVFKLRKALNPKSALKPSSLAK 450

Query: 122  181
           
Sbjct: 481  450

Query: 182  241
           
Sbjct: 541  450

Query: 242  275
           
Sbjct: 601  450

[Close]

BLAST of WMU07629 vs. TrEMBL
Match: A0A0J8EEL8_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g214200 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.7e-07
Identity = 38/90 (42.22%), Postives = 44/90 (48.89%), Query Frame = 2


Query: 5   MLPGEIVLASLDGFRQKFXXXXXXXXXXXXXXXXXXXXXXXPKGNGEQAANATNEGLDXX 64
           M PGEI+LAS DGF QK                         +  GE+AA ATNEGLD  
Sbjct: 283 MFPGEIILASFDGF-QKICDAVEVAGKNVMSTSSLVTTDLVTERYGEEAAKATNEGLDAA 342

Query: 65  XXXXXXXXXXMKIRKALNPKSALTPTTFSK 124
                      K+RKALNPK+AL PTT +K
Sbjct: 343 GHAIGTAWTVFKLRKALNPKAALKPTTLAK 371

Query: 125  184
           
Sbjct: 403  371

Query: 185  244
           
Sbjct: 463  371

Query: 245  275
           
Sbjct: 523  371

[Close]

BLAST of WMU07629 vs. TrEMBL
Match: A0A059APC0_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01404 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 6.7e-07
Identity = 40/90 (44.44%), Postives = 44/90 (48.89%), Query Frame = 2


Query: 5   MLPGEIVLASLDGFRQKFXXXXXXXXXXXXXXXXXXXXXXXPKGNGEQAANATNEGLDXX 64
           +LPGEIVLASLDGF  K                         +  GEQAA+ATNEGLD  
Sbjct: 523 LLPGEIVLASLDGFN-KVCDAVEVAGKNVMSTTSVVTTGLVSQRYGEQAAHATNEGLDAA 582

Query: 65  XXXXXXXXXXMKIRKALNPKSALTPTTFSK 124
                      KIRKA+NPKS L PTT  K
Sbjct: 583 GHAIGTAWAVFKIRKAINPKSVLKPTTLVK 611

Query: 125  184
           
Sbjct: 643  611

Query: 185  244
           
Sbjct: 703  611

Query: 245  275
           
Sbjct: 763  611

[Close]

BLAST of WMU07629 vs. TrEMBL
Match: W9QKG5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_024994 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 8.8e-07
Identity = 38/91 (41.76%), Postives = 44/91 (48.35%), Query Frame = 2


Query: 5   MLPGEIVLASLDGFRQKFXXXXXXXXXXXXXXXXXXXXXXXPKGNGEQAANATNEGLDXX 64
           ++PGEIVLASLDGF  K                         +  GEQA  ATNEGLD  
Sbjct: 347 LMPGEIVLASLDGF-SKVCDAIEVAGRNVISTTSVVTTGLVSQRYGEQAGQATNEGLDAA 406

Query: 65  XXXXXXXXXXMKIRKALNPKSALTPTTFSKI 124
                      KIRKALNPKS + PTT +K+
Sbjct: 407 GHAIGTAWAVFKIRKALNPKSVIKPTTLAKV 436

Query: 125  184
           
Sbjct: 467  436

Query: 185  244
           
Sbjct: 527  436

Query: 245  278
           
Sbjct: 587  436

[Close]

BLAST of WMU07629 vs. NCBI nr
Match: gi|778674739|ref|XP_004146148.2| (PREDICTED: uncharacterized protein LOC101217525 isoform X2 [Cucumis sativus])

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-09
Identity = 44/91 (48.35%), Postives = 48/91 (52.75%), Query Frame = 2


Query: 2   GMLPGEIVLASLDGFRQKFXXXXXXXXXXXXXXXXXXXXXXXPKGNGEQAANATNEGLDX 61
           GMLPGEIVLASLDGF + F                        K  GEQAANATNEGLD 
Sbjct: 363 GMLPGEIVLASLDGFGKVFDAVEVAGKNVMATSSTVTTELVT-KRYGEQAANATNEGLDA 422

Query: 62  XXXXXXXXXXXMKIRKALNPKSALTPTTFSK 121
                      +KIRKALNPKSAL+P   +K
Sbjct: 423 AGHAVGTAWAALKIRKALNPKSALSPKALAK 452

Query: 122  181
           
Sbjct: 483  452

Query: 182  241
           
Sbjct: 543  452

Query: 242  275
           
Sbjct: 603  452

[Close]

BLAST of WMU07629 vs. NCBI nr
Match: gi|778674736|ref|XP_011650284.1| (PREDICTED: uncharacterized protein LOC101217525 isoform X1 [Cucumis sativus])

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-09
Identity = 44/91 (48.35%), Postives = 48/91 (52.75%), Query Frame = 2


Query: 2   GMLPGEIVLASLDGFRQKFXXXXXXXXXXXXXXXXXXXXXXXPKGNGEQAANATNEGLDX 61
           GMLPGEIVLASLDGF + F                        K  GEQAANATNEGLD 
Sbjct: 363 GMLPGEIVLASLDGFGKVFDAVEVAGKNVMATSSTVTTELVT-KRYGEQAANATNEGLDA 422

Query: 62  XXXXXXXXXXXMKIRKALNPKSALTPTTFSK 121
                      +KIRKALNPKSAL+P   +K
Sbjct: 423 AGHAVGTAWAALKIRKALNPKSALSPKALAK 452

Query: 122  181
           
Sbjct: 483  452

Query: 182  241
           
Sbjct: 543  452

Query: 242  275
           
Sbjct: 603  452

[Close]

BLAST of WMU07629 vs. NCBI nr
Match: gi|659095351|ref|XP_008448535.1| (PREDICTED: uncharacterized protein LOC103490684 [Cucumis melo])

HSP 1 Score: 71.6 bits (174), Expect = 1.6e-09
Identity = 44/91 (48.35%), Postives = 48/91 (52.75%), Query Frame = 2


Query: 2   GMLPGEIVLASLDGFRQKFXXXXXXXXXXXXXXXXXXXXXXXPKGNGEQAANATNEGLDX 61
           GMLPGEIVLASLDGF + F                        K  GEQAANATNEGLD 
Sbjct: 363 GMLPGEIVLASLDGFGKVFDAVEVAGKNVMATSSTVTTELVT-KRYGEQAANATNEGLDA 422

Query: 62  XXXXXXXXXXXMKIRKALNPKSALTPTTFSK 121
                      +KIRKALNPKSAL+P   +K
Sbjct: 423 AGHAVGTAWAALKIRKALNPKSALSPKALAK 452

Query: 122  181
           
Sbjct: 483  452

Query: 182  241
           
Sbjct: 543  452

Query: 242  275
           
Sbjct: 603  452

[Close]

BLAST of WMU07629 vs. NCBI nr
Match: gi|442022399|gb|AGC51775.1| (drought-inducible protein [Manihot esculenta])

HSP 1 Score: 64.3 bits (155), Expect = 2.5e-07
Identity = 40/91 (43.96%), Postives = 45/91 (49.45%), Query Frame = 2


Query: 2   GMLPGEIVLASLDGFRQKFXXXXXXXXXXXXXXXXXXXXXXXPKGNGEQAANATNEGLDX 61
           G+LPGEIVLASLDGF  K                            GEQAA ATNEGLD 
Sbjct: 361 GLLPGEIVLASLDGF-SKMCDAAEVAGKNVMSTSSTVTTDLVNHRYGEQAAEATNEGLDA 420

Query: 62  XXXXXXXXXXXMKIRKALNPKSALTPTTFSK 121
                       K+RKALNPKSAL P++ +K
Sbjct: 421 AGHAMGTALAVFKLRKALNPKSALKPSSLAK 450

Query: 122  181
           
Sbjct: 481  450

Query: 182  241
           
Sbjct: 541  450

Query: 242  275
           
Sbjct: 601  450

[Close]

BLAST of WMU07629 vs. NCBI nr
Match: gi|629089258|gb|KCW55511.1| (hypothetical protein EUGRSUZ_I01404 [Eucalyptus grandis])

HSP 1 Score: 63.5 bits (153), Expect = 4.3e-07
Identity = 40/90 (44.44%), Postives = 44/90 (48.89%), Query Frame = 2


Query: 5   MLPGEIVLASLDGFRQKFXXXXXXXXXXXXXXXXXXXXXXXPKGNGEQAANATNEGLDXX 64
           +LPGEIVLASLDGF  K                         +  GEQAA+ATNEGLD  
Sbjct: 523 LLPGEIVLASLDGFN-KVCDAVEVAGKNVMSTTSVVTTGLVSQRYGEQAAHATNEGLDAA 582

Query: 65  XXXXXXXXXXMKIRKALNPKSALTPTTFSK 124
                      KIRKA+NPKS L PTT  K
Sbjct: 583 GHAIGTAWAVFKIRKAINPKSVLKPTTLVK 611

Query: 125  184
           
Sbjct: 643  611

Query: 185  244
           
Sbjct: 703  611

Query: 245  275
           
Sbjct: 763  611

The following BLAST results are available for this feature:

BLAST of WMU07629 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G17840.1	2.4e-08	38.89	Senescence/dehydration-associated protein-related	[more]
AT3G51250.1	5.4e-08	38.46	Senescence/dehydration-associated protein-related	[more]
AT4G35985.1	6.0e-07	36.26	Senescence/dehydration-associated protein-related	[more]

BLAST of WMU07629 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L4X4_CUCSA	3.2e-09	48.35	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G002720 PE=4 SV=1	[more]
V9M4U9_MANES	3.9e-07	43.96	Drought-inducible protein OS=Manihot esculenta GN=ERD7 PE=2 SV=1	[more]
A0A0J8EEL8_BETVU	6.7e-07	42.22	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_9g214200 PE=4 S...	[more]
A0A059APC0_EUCGR	6.7e-07	44.44	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I01404 PE=4 SV=1	[more]
W9QKG5_9ROSA	8.8e-07	41.76	Uncharacterized protein OS=Morus notabilis GN=L484_024994 PE=4 SV=1	[more]

BLAST of WMU07629 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|778674739\|ref\|XP_004146148.2\|	1.6e-09	48.35	PREDICTED: uncharacterized protein LOC101217525 isoform X2 [Cucumis sativus]	[more]
gi\|778674736\|ref\|XP_011650284.1\|	1.6e-09	48.35	PREDICTED: uncharacterized protein LOC101217525 isoform X1 [Cucumis sativus]	[more]
gi\|659095351\|ref\|XP_008448535.1\|	1.6e-09	48.35	PREDICTED: uncharacterized protein LOC103490684 [Cucumis melo]	[more]
gi\|442022399\|gb\|AGC51775.1\|	2.5e-07	43.96	drought-inducible protein [Manihot esculenta]	[more]
gi\|629089258\|gb\|KCW55511.1\|	4.3e-07	44.44	hypothetical protein EUGRSUZ_I01404 [Eucalyptus grandis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla008906	Cla008906	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S1_0058063	S1_0058063	EST
S3_0123201	S3_0123201	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR21068	FAMILY NOT NAMED	coord: 1..75 score: 2.1
None	No IPR available	PANTHER	PTHR21068:SF22	SUBFAMILY NOT NAMED	coord: 1..75 score: 2.1