WMU06777 (transcribed_cluster) Watermelon (97103) v1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	WMU06777
Type	transcribed_cluster
Organism	Citrullus. lanatus (Watermelon (97103) v1)
Description	Unknown protein
Location	Chr10 : 935392 .. 937145 (-)
Sequence length	497

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

AATTGGAAATTGCTTTGGCCATATATTTGTTGATGAGGTAAAATAAATTGTCTGGAAGATTTTGGCTTCTTCAGGATCTGGGAGCTCTCTGGAATTTTCAAGACCGAGGAGCTGGAAGTCGGTTTTCGTCGTGTTTTTCATCGATCCACCATCCTGTTTACGAATTTGAGCTGATGGTTTATATCTGTCGAGTAATCGTAGAATCCAGTTCCCCAAAGATTCCTACCAACTTCTAAGTCTCTCTGCTGTATGTTCAAGTAGAACCTTTAATGCTACATCAAATACAGCACGGGTACGTCGGTGAAGAAACTGACGGATCTTGGGAAACTTTGGGCTGACGACGCGACGTTGAAGCTTGAGGGCGAGGCGATAAGTTCGCTTGAGACCCAAGAAATAGGCGGTTCCTAGAGTGATTTCCCATAGCACCATTTTTCTCTCTCTAGAAATTTCTTCTCCTTCTCTCTGAATTCGCTGTGTTCTGTGGCATTTGAAGAGTC

Library


Library category	ESTs
watermelon fruit 34d library	32

Homology

[Close]

BLAST of WMU06777 vs. TAIR10
Match: AT1G32260.1 (AT1G32260.1 unknown protein)

HSP 1 Score: 123.6 bits (309), Expect = 1.1e-28
Identity = 63/90 (70.00%), Postives = 72/90 (80.00%), Query Frame = -3


Query: 160 MVLWEITLGTAYFLGLKRTYRLALKLQRRVVSPKFPKIRQFLHRRTRAVFDVALKVLLEH 219
           MV WEITLGTAYFLGL+RTYRLALK+QRR+V+PK PKIRQFLHRRTR +FDVA+ V  ++
Sbjct: 1   MVFWEITLGTAYFLGLRRTYRLALKIQRRLVTPKHPKIRQFLHRRTRKIFDVAISV-HKN 60

Query: 220 TAERLRSW*ESLGNWILRLLDRYKPSAQIR 279
             ER      +LGNWILR LD+ KP+AQIR
Sbjct: 61  IQERDIEVGRNLGNWILRWLDKMKPAAQIR 89

Query: 280  339
           
Sbjct: 121  89

Query: 340  399
           
Sbjct: 181  89

Query: 400  430
           
Sbjct: 241  89

[Close]

BLAST of WMU06777 vs. TAIR10
Match: AT2G35480.1 (AT2G35480.1 unknown protein)

HSP 1 Score: 113.6 bits (283), Expect = 1.1e-25
Identity = 57/89 (64.04%), Postives = 69/89 (77.53%), Query Frame = -3


Query: 163 MVLWEITLGTAYFLGLKRTYRLALKLQRRVVSPKFPKIRQFLHRRTRAVFDVALKVLLEH 222
           MVLWE+ LGTAYFLG++RTYRLALK QRR+VSPK P+IR F+HRRT  +FD+AL+V  ++
Sbjct: 1   MVLWELALGTAYFLGIRRTYRLALKTQRRLVSPKHPRIRDFMHRRTYQIFDMALRV-HKN 60

Query: 223 TAERLRSW*ESLGNWILRLLDRYKPSAQI 282
             +R      +LGNWILR LDR KPSAQ+
Sbjct: 61  IQQRDMVIGRNLGNWILRGLDRMKPSAQV 88

Query: 283  342
           
Sbjct: 121  88

Query: 343  402
           
Sbjct: 181  88

Query: 403  430
           
Sbjct: 241  88

[Close]

BLAST of WMU06777 vs. TrEMBL
Match: A0A0A0L6E7_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G008880 PE=4 SV=1)

HSP 1 Score: 173.3 bits (438), Expect = 2.4e-40
Identity = 97/145 (66.90%), Postives = 109/145 (75.17%), Query Frame = -3


Query: 4   MVLWEITLGTAYFLGLKRTYRLALKLQRRVVSPKFPKIRQFLHRRTRAVFDVALKVLLEH 63
           MVLWEITLGTAYFLGLKRTYRLALKLQRR++SPK PKIRQF+ RRTR VFDVALKV L  
Sbjct: 1   MVLWEITLGTAYFLGLKRTYRLALKLQRRIISPKLPKIRQFVRRRTRDVFDVALKVHLNI 60

Query: 64  TAERLRSW*ESLGNWILRLLDRYKPSAQIRKQDGGSMKNTTK--TDFQLLGL-ENSRELP 123
               L     +LGNWILRLLDRYKPSAQIRKQDG SM N  K  +   +L + E+S+ L 
Sbjct: 61  QKRDLEVG-RNLGNWILRLLDRYKPSAQIRKQDGESMANAKKQISSSSILKMPESSQTLK 120

Query: 124 DPEEAKIFQTIYFTSSTNIWPKQFP 183
            P+ ++      FTSSTNIWPKQFP
Sbjct: 121 KPKSSRQL----FTSSTNIWPKQFP 140

Query: 184  243
           
Sbjct: 181  140

Query: 244  303
           
Sbjct: 241  140

Query: 304  363
           
Sbjct: 301  140

Query: 364  423
           
Sbjct: 361  140

Query: 424  430
           
Sbjct: 421  140

[Close]

BLAST of WMU06777 vs. TrEMBL
Match: W9RDT2_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_017752 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 3.3e-29
Identity = 79/146 (54.11%), Postives = 99/146 (67.81%), Query Frame = -3


Query: 7   MVLWEITLGTAYFLGLKRTYRLALKLQRRVVSPKFPKIRQFLHRRTRAVFDVALKVLLEH 66
           MVLWEITLGTAYFLGLKRTYRLAL++QRR++SPK P+IRQFLHRRTR VFDVALKV  + 
Sbjct: 1   MVLWEITLGTAYFLGLKRTYRLALRIQRRLISPKHPRIRQFLHRRTRVVFDVALKVHYK- 60

Query: 67  TAERLRSW*ESLGNWILRLLDRYKPSAQIRKQ---DGGSMKNTTKTDFQLLGLENSRELP 126
             +R      +LGNWILR LD+ KPSAQIR       G+  N + T  Q+      +   
Sbjct: 61  VQQRDIEVGRNLGNWILRWLDQMKPSAQIRGPPPCSNGASSNMSMTK-QVSSSTQLKSPG 120

Query: 127 DPEEAKIFQT--IYFTSSTNIWPKQF 186
           +P+ ++  ++    FTS  N+WPK F
Sbjct: 121 NPQTSREQESDRHLFTSYKNVWPKPF 144

Query: 187  246
           
Sbjct: 181  144

Query: 247  306
           
Sbjct: 241  144

Query: 307  366
           
Sbjct: 301  144

Query: 367  426
           
Sbjct: 361  144

Query: 427  430
           
Sbjct: 421  144

[Close]

BLAST of WMU06777 vs. TrEMBL
Match: V4KQM8_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10008414mg PE=4 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 5.6e-29
Identity = 72/113 (63.72%), Postives = 84/113 (74.34%), Query Frame = -3


Query: 130 IQREGEEISRERKMVLWEITLGTAYFLGLKRTYRLALKLQRRVVSPKFPKIRQFLHRRTR 189
           ++ E EE    RKMVLWEITLGTAYFLGL+RTYRLALK+QRR+VSPK PKIRQFLHRRTR
Sbjct: 68  VEEEEEEEGSRRKMVLWEITLGTAYFLGLRRTYRLALKIQRRIVSPKHPKIRQFLHRRTR 127

Query: 190 AVFDVALKVLLEHTAERLRSW*ESLGNWILRLLDRYKPSAQIRKQDGGSMKNT 249
            +FDVA+ V  ++   R      +LGNWILR LDR KP+AQIR +      NT
Sbjct: 128 KIFDVAVSV-HKNIQHRDIEVGRNLGNWILRWLDRMKPAAQIRTRPEPPHYNT 179

Query: 250  309
           
Sbjct: 188  179

Query: 310  369
           
Sbjct: 248  179

Query: 370  429
           
Sbjct: 308  179

Query: 430  469
           
Sbjct: 368  179

[Close]

BLAST of WMU06777 vs. TrEMBL
Match: A0A0D2N098_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G182900 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.8e-28
Identity = 80/150 (53.33%), Postives = 95/150 (63.33%), Query Frame = -3


Query: 4   MVLWEITLGTAYFLGLKRTYRLALKLQRRVVSPKFPKIRQFLHRRTRAVFDVALKVLLEH 63
           MVLWEITLGTAYFLGLKRTYRLALK+QRR++SPK P+IRQF+HRRTRAVFD+ALKV  ++
Sbjct: 1   MVLWEITLGTAYFLGLKRTYRLALKIQRRIISPKRPRIRQFVHRRTRAVFDIALKV-HQN 60

Query: 64  TAERLRSW*ESLGNWILRLLDRYKPSAQIRKQD--------GGSMKNTTKTDFQLLGLEN 123
             +R      +LGNWILR LD+ KPSAQIR           G +  N TK          
Sbjct: 61  IQQRDLEVGRNLGNWILRWLDKMKPSAQIRPPSHQKLHHGTGSAKMNITKQVNNSSKTPR 120

Query: 124 SRELPDPEEAKIFQTIYFTSSTNIWPKQFP 183
           S + P   EA       F+SST +  K  P
Sbjct: 121 SLQTPRNSEA---DKRLFSSSTYMLSKSLP 146

Query: 184  243
           
Sbjct: 181  146

Query: 244  303
           
Sbjct: 241  146

Query: 304  363
           
Sbjct: 301  146

Query: 364  423
           
Sbjct: 361  146

Query: 424  430
           
Sbjct: 421  146

[Close]

BLAST of WMU06777 vs. TrEMBL
Match: A0A059BZS3_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00235 PE=4 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 2.8e-28
Identity = 77/148 (52.03%), Postives = 95/148 (64.19%), Query Frame = -3


Query: 4   MVLWEITLGTAYFLGLKRTYRLALKLQRRVVSPKFPKIRQFLHRRTRAVFDVALKVLLEH 63
           MVLWEITL TAY LGLKRTY+LAL++QRR++ PK PKIRQFLHRRTR VFDVALKV   +
Sbjct: 1   MVLWEITLATAYVLGLKRTYKLALRIQRRLIGPKHPKIRQFLHRRTRVVFDVALKV-HRN 60

Query: 64  TAERLRSW*ESLGNWILRLLDRYKPSAQIR-KQDGGSMKNTTKTDFQLLGLENSRELPDP 123
             ER      +LGNWILR LDR KPSAQIR    GGS  N++        ++ + +  +P
Sbjct: 61  IQERDIEVGRNLGNWILRSLDRIKPSAQIRCSSSGGSPSNSSTGMNMTKQIKGTSQWKNP 120

Query: 124 -----EEAKIFQTIYFTSSTNIWPKQFP 183
                 + +      F+S  N WP+ FP
Sbjct: 121 GTFSSSKNQESDRRMFSSLKNTWPRPFP 147

Query: 184  243
           
Sbjct: 181  147

Query: 244  303
           
Sbjct: 241  147

Query: 304  363
           
Sbjct: 301  147

Query: 364  423
           
Sbjct: 361  147

Query: 424  430
           
Sbjct: 421  147

[Close]

BLAST of WMU06777 vs. NCBI nr
Match: gi|659095578|ref|XP_008448656.1| (PREDICTED: uncharacterized protein LOC103490759 [Cucumis melo])

HSP 1 Score: 176.8 bits (447), Expect = 3.1e-41
Identity = 98/145 (67.59%), Postives = 110/145 (75.86%), Query Frame = -3


Query: 4   MVLWEITLGTAYFLGLKRTYRLALKLQRRVVSPKFPKIRQFLHRRTRAVFDVALKVLLEH 63
           MVLWEITLGTAYFLGLKRTYRLALKLQRR++SPK PKIRQF+HRRTR VFDVALKV L  
Sbjct: 1   MVLWEITLGTAYFLGLKRTYRLALKLQRRIISPKLPKIRQFVHRRTRNVFDVALKVHLNI 60

Query: 64  TAERLRSW*ESLGNWILRLLDRYKPSAQIRKQDGGSMKNTTK--TDFQLLGL-ENSRELP 123
               L     +LGNWILRLLDRYKPSAQIRKQDG SM N  K  +   +L + E+S+ L 
Sbjct: 61  QKRDLEVG-RNLGNWILRLLDRYKPSAQIRKQDGESMTNAKKQISSSSILKMPESSQTLK 120

Query: 124 DPEEAKIFQTIYFTSSTNIWPKQFP 183
            P+ ++      FTSSTNIWPKQFP
Sbjct: 121 KPKSSRQL----FTSSTNIWPKQFP 140

Query: 184  243
           
Sbjct: 181  140

Query: 244  303
           
Sbjct: 241  140

Query: 304  363
           
Sbjct: 301  140

Query: 364  423
           
Sbjct: 361  140

Query: 424  430
           
Sbjct: 421  140

[Close]

BLAST of WMU06777 vs. NCBI nr
Match: gi|449462045|ref|XP_004148752.1| (PREDICTED: uncharacterized protein LOC101208416 [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 2.7e-40
Identity = 97/145 (66.90%), Postives = 109/145 (75.17%), Query Frame = -3


Query: 4   MVLWEITLGTAYFLGLKRTYRLALKLQRRVVSPKFPKIRQFLHRRTRAVFDVALKVLLEH 63
           MVLWEITLGTAYFLGLKRTYRLALKLQRR++SPK PKIRQF+ RRTR VFDVALKV L  
Sbjct: 1   MVLWEITLGTAYFLGLKRTYRLALKLQRRIISPKLPKIRQFVRRRTRDVFDVALKVHLNI 60

Query: 64  TAERLRSW*ESLGNWILRLLDRYKPSAQIRKQDGGSMKNTTK--TDFQLLGL-ENSRELP 123
               L     +LGNWILRLLDRYKPSAQIRKQDG SM N  K  +   +L + E+S+ L 
Sbjct: 61  QKRDLEVG-RNLGNWILRLLDRYKPSAQIRKQDGESMANAKKQISSSSILKMPESSQTLK 120

Query: 124 DPEEAKIFQTIYFTSSTNIWPKQFP 183
            P+ ++      FTSSTNIWPKQFP
Sbjct: 121 KPKSSRQL----FTSSTNIWPKQFP 140

Query: 184  243
           
Sbjct: 181  140

Query: 244  303
           
Sbjct: 241  140

Query: 304  363
           
Sbjct: 301  140

Query: 364  423
           
Sbjct: 361  140

Query: 424  430
           
Sbjct: 421  140

[Close]

BLAST of WMU06777 vs. NCBI nr
Match: gi|729342968|ref|XP_010540754.1| (PREDICTED: uncharacterized protein LOC104814421 [Tarenaya hassleriana])

HSP 1 Score: 138.3 bits (347), Expect = 1.2e-29
Identity = 80/148 (54.05%), Postives = 92/148 (62.16%), Query Frame = -3


Query: 4   MVLWEITLGTAYFLGLKRTYRLALKLQRRVVSPKFPKIRQFLHRRTRAVFDVALKVLLEH 63
           MVLWEITLGTAYFLGLKRTYRLALK+QRR+V PK P+IRQFLHRRTR VFDVAL V  + 
Sbjct: 1   MVLWEITLGTAYFLGLKRTYRLALKIQRRIVGPKHPRIRQFLHRRTRQVFDVALNV-HKS 60

Query: 64  TAERLRSW*ESLGNWILRLLDRYKPSAQIRKQ------DGGSMKNTTKTDFQLLGLENSR 123
             ER      +LGNWILR LDR KP A IR           S  +  K   +   L+ SR
Sbjct: 61  IQERDIEVGRNLGNWILRWLDRMKPEAHIRAPPEQLPCHTNSSTDKAKKISESSHLKTSR 120

Query: 124 ELPDPEEAKIFQTIYFTSSTNIWPKQFP 183
               P+  +    + F SS  +WPK FP
Sbjct: 121 NTQSPQNRE-SDRLMFVSSRKLWPKSFP 146

Query: 184  243
           
Sbjct: 181  146

Query: 244  303
           
Sbjct: 241  146

Query: 304  363
           
Sbjct: 301  146

Query: 364  423
           
Sbjct: 361  146

Query: 424  430
           
Sbjct: 421  146

[Close]

BLAST of WMU06777 vs. NCBI nr
Match: gi|703100507|ref|XP_010096938.1| (hypothetical protein L484_017752 [Morus notabilis])

HSP 1 Score: 136.3 bits (342), Expect = 4.7e-29
Identity = 79/146 (54.11%), Postives = 99/146 (67.81%), Query Frame = -3


Query: 7   MVLWEITLGTAYFLGLKRTYRLALKLQRRVVSPKFPKIRQFLHRRTRAVFDVALKVLLEH 66
           MVLWEITLGTAYFLGLKRTYRLAL++QRR++SPK P+IRQFLHRRTR VFDVALKV  + 
Sbjct: 1   MVLWEITLGTAYFLGLKRTYRLALRIQRRLISPKHPRIRQFLHRRTRVVFDVALKVHYK- 60

Query: 67  TAERLRSW*ESLGNWILRLLDRYKPSAQIRKQ---DGGSMKNTTKTDFQLLGLENSRELP 126
             +R      +LGNWILR LD+ KPSAQIR       G+  N + T  Q+      +   
Sbjct: 61  VQQRDIEVGRNLGNWILRWLDQMKPSAQIRGPPPCSNGASSNMSMTK-QVSSSTQLKSPG 120

Query: 127 DPEEAKIFQT--IYFTSSTNIWPKQF 186
           +P+ ++  ++    FTS  N+WPK F
Sbjct: 121 NPQTSREQESDRHLFTSYKNVWPKPF 144

Query: 187  246
           
Sbjct: 181  144

Query: 247  306
           
Sbjct: 241  144

Query: 307  366
           
Sbjct: 301  144

Query: 367  426
           
Sbjct: 361  144

Query: 427  430
           
Sbjct: 421  144

[Close]

BLAST of WMU06777 vs. NCBI nr
Match: gi|567145338|ref|XP_006415221.1| (hypothetical protein EUTSA_v10008414mg [Eutrema salsugineum])

HSP 1 Score: 135.6 bits (340), Expect = 8.0e-29
Identity = 72/113 (63.72%), Postives = 84/113 (74.34%), Query Frame = -3


Query: 130 IQREGEEISRERKMVLWEITLGTAYFLGLKRTYRLALKLQRRVVSPKFPKIRQFLHRRTR 189
           ++ E EE    RKMVLWEITLGTAYFLGL+RTYRLALK+QRR+VSPK PKIRQFLHRRTR
Sbjct: 68  VEEEEEEEGSRRKMVLWEITLGTAYFLGLRRTYRLALKIQRRIVSPKHPKIRQFLHRRTR 127

Query: 190 AVFDVALKVLLEHTAERLRSW*ESLGNWILRLLDRYKPSAQIRKQDGGSMKNT 249
            +FDVA+ V  ++   R      +LGNWILR LDR KP+AQIR +      NT
Sbjct: 128 KIFDVAVSV-HKNIQHRDIEVGRNLGNWILRWLDRMKPAAQIRTRPEPPHYNT 179

Query: 250  309
           
Sbjct: 188  179

Query: 310  369
           
Sbjct: 248  179

Query: 370  429
           
Sbjct: 308  179

Query: 430  469
           
Sbjct: 368  179

The following BLAST results are available for this feature:

BLAST of WMU06777 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G32260.1	1.1e-28	70.00	unknown protein	[more]
AT2G35480.1	1.1e-25	64.04	unknown protein	[more]

BLAST of WMU06777 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L6E7_CUCSA	2.4e-40	66.90	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G008880 PE=4 SV=1	[more]
W9RDT2_9ROSA	3.3e-29	54.11	Uncharacterized protein OS=Morus notabilis GN=L484_017752 PE=4 SV=1	[more]
V4KQM8_EUTSA	5.6e-29	63.72	Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10008414mg PE=4 SV=1	[more]
A0A0D2N098_GOSRA	2.8e-28	53.33	Uncharacterized protein OS=Gossypium raimondii GN=B456_004G182900 PE=4 SV=1	[more]
A0A059BZS3_EUCGR	2.8e-28	52.03	Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_E00235 PE=4 SV=1	[more]

BLAST of WMU06777 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659095578\|ref\|XP_008448656.1\|	3.1e-41	67.59	PREDICTED: uncharacterized protein LOC103490759 [Cucumis melo]	[more]
gi\|449462045\|ref\|XP_004148752.1\|	2.7e-40	66.90	PREDICTED: uncharacterized protein LOC101208416 [Cucumis sativus]	[more]
gi\|729342968\|ref\|XP_010540754.1\|	1.2e-29	54.05	PREDICTED: uncharacterized protein LOC104814421 [Tarenaya hassleriana]	[more]
gi\|703100507\|ref\|XP_010096938.1\|	4.7e-29	54.11	hypothetical protein L484_017752 [Morus notabilis]	[more]
gi\|567145338\|ref\|XP_006415221.1\|	8.0e-29	63.72	hypothetical protein EUTSA_v10008414mg [Eutrema salsugineum]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
Cla008828	Cla008828	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
S4_0140919	S4_0140919	EST
S4_0146191	S4_0146191	EST
S4_0153818	S4_0153818	EST
S4_0154005	S4_0154005	EST
S4_0157466	S4_0157466	EST
S4_0158859	S4_0158859	EST
S4_0159782	S4_0159782	EST
S4_0160010	S4_0160010	EST
S4_0162296	S4_0162296	EST
S4_0163051	S4_0163051	EST
S4_0163915	S4_0163915	EST
S4_0164223	S4_0164223	EST
S4_0164242	S4_0164242	EST
S4_0164745	S4_0164745	EST
S4_0168745	S4_0168745	EST
S4_0169791	S4_0169791	EST
S4_0170313	S4_0170313	EST
S4_0171096	S4_0171096	EST
S4_0171461	S4_0171461	EST
S4_0171787	S4_0171787	EST
S4_0172432	S4_0172432	EST
S4_0172464	S4_0172464	EST
S4_0172672	S4_0172672	EST
S4_0173310	S4_0173310	EST
S4_0176186	S4_0176186	EST
S4_0176387	S4_0176387	EST
S4_0176491	S4_0176491	EST
S4_0177876	S4_0177876	EST
S4_0178378	S4_0178378	EST
S4_0180387	S4_0180387	EST
S4_0180888	S4_0180888	EST
S4_0181336	S4_0181336	EST

InterPro

Analysis Name: InterPro Annotations of watermelon unigene v2
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR35998	FAMILY NOT NAMED	coord: 2..71 score: 7.1
None	No IPR available	PANTHER	PTHR35998:SF1	SUBFAMILY NOT NAMED	coord: 2..71 score: 7.1