MU67357 (transcribed_cluster) Melon (DHL92) v3.5.1

Overview
NameMU67357
Typetranscribed_cluster
OrganismCucumis melo (Melon (DHL92) v3.5.1)
DescriptionIrc5p
Locationchr11 : 18516758 .. 18518460 (+)
Sequence length811
Genome Viewer
Sequences
The following sequences are available for this feature:

transcribed_cluster sequence

CAATTTATTGCAAACTCAACCACTTTGATGTCGTTTCAGACTTTGAAAGAGACCCTTAAACCCTGCAAAAGCCTCTCGTCATCGGCCTCTGCACCCACTTCTCCCATTTCTTCAAACCCCTCATTCTTCCAAGGATCTGGGGTTAATTTTCTTCGAAAACCCCCCAAATCCTCTCTCTCTTTGCAGCTTCTGCGCCTACAGGATTCATTTCCCACGCCTGAAAATCGAACACAGTGTCAAAACCAGCTGACTCGGATTAGATTTACGACAGGGGAAGAGGAAGAGGAAGAGAATGGAGTGGAGGTGCCAGAACCAGACTTGTCGAAGAAGAGAAGCGAATTGGGTCTGTTCCAGTTTGATCATACAGGCCTACTCGAACCTTTGATTTTGTCATCGAAGGATGATTTTCCTCTCGTACAGGTACCTCCATCTATCAATTGTAGGTTACTTGAACATCAAAGAGAAGGAGTCAAATTCTTGTATGGTTTATACAAGAACGGCCATGGAGGCATTCTTGGAGATGACATGGGGCTTGGAAAGACCATTCAAACTATTGCTTTCCTGGCTGCTGTGTACGCCAAAGATGGAGATGGGATCCAGAAGGAAACTTGTGGAAAGAAAAAGGATCCTGTACTAATAGTATCCCCCACTTCGGTAATTCATAATTGGGAGAATGAGTTCTCAAAATGGGCAAAGTTCAGTGTTGCAGTTTATCATGGAACAAACCGTGACTTGATTTATGATAAACTAGAAGCAGGTGCTATAGAGGAATAAAAACCTTGAAGCGCTTTGGTCTTACTGGAACTATAAT
Library
Library categoryESTs
melon CM-VEa library1
Homology
[Close]
BLAST of MU67357 vs. Swiss-Prot
Match: CHR9_ARATH (Switch 2 OS=Arabidopsis thaliana GN=SWI2 PE=3 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 1.3e-49
Identity = 95/147 (64.63%), Postives = 113/147 (76.87%), Query Frame = 1 

Query: 331 RSELGLFQFDHTGLLEPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGG 390
           R  L   +FD++G  EPL+LSS  + P++ VP SINCRLLEHQREGVKF+Y LYKN HGG
Sbjct: 101 RPGLSRAEFDYSGPYEPLMLSSIGEIPIIHVPASINCRLLEHQREGVKFMYNLYKNNHGG 160

Query: 391 ILGDDMGLGKTIQTIAFLAAVYAKDGDGIQKETCGKKKDPVLIVSPTSVIHNWENEFSKW 450
           ILGDDMGLGKTIQTIAFLAAVY KDGD  +       K PVLI+ P+S+IHNWE+EFS+W
Sbjct: 161 ILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCLLESDKGPVLIICPSSIIHNWESEFSRW 220

Query: 451 AK-FSVAVYHGTNRDLIYDKLEAGAIE 510
           A  F V+VYHG+NRD+I +KL+A  +E
Sbjct: 221 ASFFKVSVYHGSNRDMILEKLKARGVE 247

Query: 511  570
           
Sbjct: 281  247

Query: 571  630
           
Sbjct: 341  247

Query: 631  690
           
Sbjct: 401  247

Query: 691  750
           
Sbjct: 461  247

Query: 751  769
           
Sbjct: 521  247

[Close]
BLAST of MU67357 vs. Swiss-Prot
Match: ER6L2_BOVIN (DNA excision repair protein ERCC-6-like 2 OS=Bos taurus GN=ERCC6L2 PE=2 SV=3)

HSP 1 Score: 99.8 bits (247), Expect = 5.0e-20
Identity = 55/132 (41.67%), Postives = 71/132 (53.79%), Query Frame = 1 

Query: 379 PLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKTIQTIA 438
           P  LS   D     +P +IN  L ++QREG +FLYG +  G G ILGDDMGLGKT+Q I+
Sbjct: 117 PFQLSENGD----SIPYTINRYLRDYQREGAQFLYGHFIQGRGCILGDDMGLGKTVQVIS 176

Query: 439 FLAAVYAKDGD--------------GIQKETCGKKKDPVLIVSPTSVIHNWENEFSKWAK 498
           FLAAV  K G                ++K+     K   LIV+P SV++NW++E   W  
Sbjct: 177 FLAAVLGKKGTREDIENNMPEFLLRNMKKDPPSTAKKMFLIVAPLSVLYNWKDELDTWGY 236

Query: 499 FSVAVYHGTNRD 558
           F V + HG  +D
Sbjct: 237 FRVTILHGNKKD 244

Query: 559  618
           
Sbjct: 297  244

Query: 619  678
           
Sbjct: 357  244

Query: 679  733
           
Sbjct: 417  244

[Close]
BLAST of MU67357 vs. Swiss-Prot
Match: ER6L2_HUMAN (DNA excision repair protein ERCC-6-like 2 OS=Homo sapiens GN=ERCC6L2 PE=1 SV=2)

HSP 1 Score: 99.0 bits (245), Expect = 8.5e-20
Identity = 55/119 (46.22%), Postives = 69/119 (57.98%), Query Frame = 1 

Query: 421 VPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKTIQTIAFLAAVYAKDGDGIQ 480
           +P +IN  L ++QREG +FLYG Y +G G ILGDDMGLGKT+Q I+FLAAV  K G    
Sbjct: 126 IPYTINRYLRDYQREGTRFLYGHYIHGGGCILGDDMGLGKTVQVISFLAAVLHKKGTRED 185

Query: 481 KET-------CGKKKDPV--------LIVSPTSVIHNWENEFSKWAKFSVAVYHGTNRD 540
            E           KK+P+        LIV+P SV++NW++E   W  F V V HG  +D
Sbjct: 186 IENNMPEFLLRSMKKEPLSSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTVLHGNRKD 244

Query: 541  600
           
Sbjct: 246  244

Query: 601  660
           
Sbjct: 306  244

Query: 661  720
           
Sbjct: 366  244

Query: 721  733
           
Sbjct: 426  244

[Close]
BLAST of MU67357 vs. Swiss-Prot
Match: ER6L2_MOUSE (DNA excision repair protein ERCC-6-like 2 OS=Mus musculus GN=Ercc6l2 PE=1 SV=3)

HSP 1 Score: 97.4 bits (241), Expect = 2.5e-19
Identity = 53/118 (44.92%), Postives = 67/118 (56.78%), Query Frame = 1 

Query: 421 VPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKTIQTIAFLAAVYAKDG---- 480
           +P +IN  L ++QREG +FLY  Y  G G ILGDDMGLGKTIQ I+FLAAV  K G    
Sbjct: 114 IPYTINRYLRDYQREGAQFLYRHYIEGRGCILGDDMGLGKTIQVISFLAAVLHKKGTRED 173

Query: 481 ----------DGIQKETCGKKKDPVLIVSPTSVIHNWENEFSKWAKFSVAVYHGTNRD 540
                       ++K+     K   LIV+P SV++NW++E   W  F V V HG+ +D
Sbjct: 174 IENNMPEFLLKSMKKKPPSTAKKMFLIVAPLSVLYNWKDELDTWGYFRVTVLHGSKKD 231

Query: 541  600
           
Sbjct: 234  231

Query: 601  660
           
Sbjct: 294  231

Query: 661  720
           
Sbjct: 354  231

Query: 721  733
           
Sbjct: 414  231

[Close]
BLAST of MU67357 vs. Swiss-Prot
Match: ERC6L_MOUSE (DNA excision repair protein ERCC-6-like OS=Mus musculus GN=Ercc6l PE=1 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 2.6e-16
Identity = 44/98 (44.90%), Postives = 61/98 (62.24%), Query Frame = 1 

Query: 442 RLLEHQREGVKFLYGLYKNGH-GGILGDDMGLGKTIQTIAFLAAVYAKDGDGIQKETCGK 501
           +L EHQ+EG+ FLY LYK+G  GGIL DDMGLGKT+Q IAFL+ ++              
Sbjct: 96  KLFEHQKEGIAFLYSLYKDGRKGGILADDMGLGKTVQIIAFLSGMFD-----------AS 155

Query: 502 KKDPVLIVSPTSVIHNWENEFSKWAK-FSVAVYHGTNR 561
             + VL++ PT++I+ W NEF+KW     V  +HG+++
Sbjct: 156 LVNHVLLIMPTNLINTWVNEFAKWTPGMRVKTFHGSSK 182

Query: 562  621
           
Sbjct: 216  182

Query: 622  681
           
Sbjct: 276  182

Query: 682  730
           
Sbjct: 336  182

[Close]
BLAST of MU67357 vs. TrEMBL
Match: A0A0A0KD05_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G127410 PE=4 SV=1)

HSP 1 Score: 370.5 bits (950), Expect = 1.7e-99
Identity = 189/255 (74.12%), Postives = 194/255 (76.08%), Query Frame = 1 

Query: 4   FIANSTTLMSFQTLKETLKPCKXXXXXXXXXXXXXXXXXXFFQGSGVNFXXXXXXXXXXX 63
           F ANSTTLMSFQTLKETLKPCK                  FFQGS V+F           
Sbjct: 33  FFANSTTLMSFQTLKETLKPCKSLSSSASAPTSPISSNPSFFQGSEVSFLRKPPKSSLSL 92

Query: 64  XXXXXXDSFPTPENRTQCQNQLTRIRFTTXXXXXXXXXXXXXXXDLSKKRSELGLFQFDH 123
                 DSFP PE RTQCQNQ T++R  T               D+SKKRSELG FQFDH
Sbjct: 93  QLLRLQDSFPPPECRTQCQNQQTQVRVKTGEEEEEENGVEVPEPDVSKKRSELGQFQFDH 152

Query: 124 TGLLEPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKT 183
           TG  EPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKT
Sbjct: 153 TGPFEPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKT 212

Query: 184 IQTIAFLAAVYAKDGDGIQKETCGKKKDPVLIVSPTSVIHNWENEFSKWAKFSVAVYHGT 243
           IQTIAFLAAVYAKDGDGIQKETCGKKKDP+LIVSPTSVIHNWENEFSKWA FSVAVYHGT
Sbjct: 213 IQTIAFLAAVYAKDGDGIQKETCGKKKDPILIVSPTSVIHNWENEFSKWANFSVAVYHGT 272

Query: 244 NRDLIYDKLEAGAIE 303
           NRDLIYDKLEAGAIE
Sbjct: 273 NRDLIYDKLEAGAIE 287

Query: 304  363
           
Sbjct: 333  287

Query: 364  423
           
Sbjct: 393  287

Query: 424  483
           
Sbjct: 453  287

Query: 484  543
           
Sbjct: 513  287

Query: 544  603
           
Sbjct: 573  287

Query: 604  663
           
Sbjct: 633  287

Query: 664  723
           
Sbjct: 693  287

Query: 724  769
           
Sbjct: 753  287

[Close]
BLAST of MU67357 vs. TrEMBL
Match: A0A0A0KD05_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_6G127410 PE=4 SV=1)

HSP 1 Score: 31.6 bits (70), Expect = 1.8e+03
Identity = 14/14 (100.00%), Postives = 14/14 (100.00%), Query Frame = 3 

Query: 768 GIKTLKRFGLTGTI 810
           GIKTLKRFGLTGTI
Sbjct: 332 GIKTLKRFGLTGTI 345


HSP 2 Score: 222.6 bits (566), Expect = 5.7e-55
Identity = 105/144 (72.92%), Postives = 120/144 (83.33%), Query Frame = 1 

Query: 337 ELGLFQFDHTGLLEPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGGIL 396
           +L  FQFDHTG  EPL+LSS  +FP VQVP SINCRLLEHQREGV+FLYGLYKN HGGIL
Sbjct: 100 KLPQFQFDHTGPFEPLLLSSHGEFPPVQVPASINCRLLEHQREGVRFLYGLYKNNHGGIL 159

Query: 397 GDDMGLGKTIQTIAFLAAVYAKDGDGIQKETCGKKKDPVLIVSPTSVIHNWENEFSKWAK 456
           GDDMGLGKTIQ IAFLAAV+AK+G     E   +K+DP LI+ PTSVIHNWE+EFSKW+ 
Sbjct: 160 GDDMGLGKTIQAIAFLAAVFAKEGHSTLNENHVEKRDPALIICPTSVIHNWESEFSKWSN 219

Query: 457 FSVAVYHGTNRDLIYDKLEAGAIE 516
           FSV++YHG NR+LIYDKLEA  +E
Sbjct: 220 FSVSIYHGANRNLIYDKLEANEVE 243

Query: 517  576
           
Sbjct: 280  243

Query: 577  636
           
Sbjct: 340  243

Query: 637  696
           
Sbjct: 400  243

Query: 697  756
           
Sbjct: 460  243

Query: 757  769
           
Sbjct: 520  243

[Close]
BLAST of MU67357 vs. TrEMBL
Match: I1LS51_SOYBN (Uncharacterized protein OS=Glycine max GN=GLYMA_12G115800 PE=4 SV=1)

HSP 1 Score: 222.6 bits (566), Expect = 5.7e-55
Identity = 105/144 (72.92%), Postives = 120/144 (83.33%), Query Frame = 1 

Query: 337 ELGLFQFDHTGLLEPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGGIL 396
           +L  FQFDHTG  EPL+LSS  +FP VQVP SINCRLLEHQREGV+FLYGLYKN HGGIL
Sbjct: 95  KLPQFQFDHTGPFEPLLLSSHGEFPPVQVPASINCRLLEHQREGVRFLYGLYKNNHGGIL 154

Query: 397 GDDMGLGKTIQTIAFLAAVYAKDGDGIQKETCGKKKDPVLIVSPTSVIHNWENEFSKWAK 456
           GDDMGLGKTIQ IAFLAAV+AK+G     E   +K+DP LI+ PTSVIHNWE+EFSKW+ 
Sbjct: 155 GDDMGLGKTIQAIAFLAAVFAKEGHSTLNENHVEKRDPALIICPTSVIHNWESEFSKWSN 214

Query: 457 FSVAVYHGTNRDLIYDKLEAGAIE 516
           FSV++YHG NR+LIYDKLEA  +E
Sbjct: 215 FSVSIYHGANRNLIYDKLEANEVE 238

Query: 517  576
           
Sbjct: 275  238

Query: 577  636
           
Sbjct: 335  238

Query: 637  696
           
Sbjct: 395  238

Query: 697  756
           
Sbjct: 455  238

Query: 757  769
           
Sbjct: 515  238

[Close]
BLAST of MU67357 vs. TrEMBL
Match: G7JTU8_MEDTR (DNA repair and recombination RAD26-like protein, putative OS=Medicago truncatula GN=MTR_4g078460 PE=4 SV=2)

HSP 1 Score: 219.2 bits (557), Expect = 6.3e-54
Identity = 103/139 (74.10%), Postives = 117/139 (84.17%), Query Frame = 1 

Query: 352 QFDHTGLLEPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMG 411
           QFDHTG  EPL+LSS  + PLVQVP SINCRLLEHQR GVKFLY LYKN  GGILGDDMG
Sbjct: 386 QFDHTGPFEPLLLSSDGELPLVQVPASINCRLLEHQRVGVKFLYDLYKNNKGGILGDDMG 445

Query: 412 LGKTIQTIAFLAAVYAKDGDGIQKETCGKKKDPVLIVSPTSVIHNWENEFSKWAKFSVAV 471
           LGKTIQTIAFLAA++ K+GD I  ET  +K+DPVLI+ P+S+I NWE+EFSKW+ FSVA+
Sbjct: 446 LGKTIQTIAFLAAIFGKEGDSILSETRVEKRDPVLIICPSSIIQNWESEFSKWSNFSVAI 505

Query: 472 YHGTNRDLIYDKLEAGAIE 531
           YHG NRDLIYDKLEA  +E
Sbjct: 506 YHGANRDLIYDKLEANGVE 524

Query: 532  591
           
Sbjct: 566  524

Query: 592  651
           
Sbjct: 626  524

Query: 652  711
           
Sbjct: 686  524

Query: 712  769
           
Sbjct: 746  524

[Close]
BLAST of MU67357 vs. TrEMBL
Match: A0A072UMT6_MEDTR (DNA repair and recombination RAD26-like protein, putative OS=Medicago truncatula GN=MTR_4g078495 PE=4 SV=1)

HSP 1 Score: 219.2 bits (557), Expect = 6.3e-54
Identity = 103/139 (74.10%), Postives = 117/139 (84.17%), Query Frame = 1 

Query: 352 QFDHTGLLEPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMG 411
           QFDHTG  EPL+LSS  + PLVQVP SINCRLLEHQR GVKFLY LYKN  GGILGDDMG
Sbjct: 100 QFDHTGPFEPLLLSSDGELPLVQVPASINCRLLEHQRVGVKFLYDLYKNNKGGILGDDMG 159

Query: 412 LGKTIQTIAFLAAVYAKDGDGIQKETCGKKKDPVLIVSPTSVIHNWENEFSKWAKFSVAV 471
           LGKTIQTIAFLAA++ K+GD I  ET  +K+DPVLI+ P+S+I NWE+EFSKW+ FSVA+
Sbjct: 160 LGKTIQTIAFLAAIFGKEGDSILSETRVEKRDPVLIICPSSIIQNWESEFSKWSNFSVAI 219

Query: 472 YHGTNRDLIYDKLEAGAIE 531
           YHG NRDLIYDKLEA  +E
Sbjct: 220 YHGANRDLIYDKLEANGVE 238

Query: 532  591
           
Sbjct: 280  238

Query: 592  651
           
Sbjct: 340  238

Query: 652  711
           
Sbjct: 400  238

Query: 712  769
           
Sbjct: 460  238

[Close]
BLAST of MU67357 vs. TAIR10
Match: AT1G03750.1 (AT1G03750.1 switch 2)

HSP 1 Score: 198.0 bits (502), Expect = 7.6e-51
Identity = 95/147 (64.63%), Postives = 113/147 (76.87%), Query Frame = 1 

Query: 331 RSELGLFQFDHTGLLEPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGG 390
           R  L   +FD++G  EPL+LSS  + P++ VP SINCRLLEHQREGVKF+Y LYKN HGG
Sbjct: 101 RPGLSRAEFDYSGPYEPLMLSSIGEIPIIHVPASINCRLLEHQREGVKFMYNLYKNNHGG 160

Query: 391 ILGDDMGLGKTIQTIAFLAAVYAKDGDGIQKETCGKKKDPVLIVSPTSVIHNWENEFSKW 450
           ILGDDMGLGKTIQTIAFLAAVY KDGD  +       K PVLI+ P+S+IHNWE+EFS+W
Sbjct: 161 ILGDDMGLGKTIQTIAFLAAVYGKDGDAGESCLLESDKGPVLIICPSSIIHNWESEFSRW 220

Query: 451 AK-FSVAVYHGTNRDLIYDKLEAGAIE 510
           A  F V+VYHG+NRD+I +KL+A  +E
Sbjct: 221 ASFFKVSVYHGSNRDMILEKLKARGVE 247

Query: 511  570
           
Sbjct: 281  247

Query: 571  630
           
Sbjct: 341  247

Query: 631  690
           
Sbjct: 401  247

Query: 691  750
           
Sbjct: 461  247

Query: 751  769
           
Sbjct: 521  247

[Close]
BLAST of MU67357 vs. TAIR10
Match: AT5G19310.1 (AT5G19310.1 Homeotic gene regulator)

HSP 1 Score: 73.9 bits (180), Expect = 1.7e-13
Identity = 42/95 (44.21%), Postives = 57/95 (60.00%), Query Frame = 1 

Query: 445 LLEHQREGVKFLYGLYKNGHGGILGDDMGLGKTIQTIAFLA-AVYAKDGDGIQKETCGKK 504
           L  +Q EG++++  LY N + GIL D+MGLGKTIQTIA +A  + +KD  G         
Sbjct: 386 LRSYQLEGLQWMVSLYNNDYNGILADEMGLGKTIQTIALIAYLLESKDLHG--------- 445

Query: 505 KDPVLIVSPTSVIHNWENEFSKWA-KFSVAVYHGT 564
             P LI++P +V+ NWENEF+ WA   S  +Y G+
Sbjct: 446 --PHLILAPKAVLPNWENEFALWAPSISAFLYDGS 469

Query: 565  624
           
Sbjct: 506  469

Query: 625  684
           
Sbjct: 566  469

Query: 685  724
           
Sbjct: 626  469

[Close]
BLAST of MU67357 vs. TAIR10
Match: AT5G66750.1 (AT5G66750.1 chromatin remodeling 1)

HSP 1 Score: 72.0 bits (175), Expect = 6.3e-13
Identity = 38/94 (40.43%), Postives = 53/94 (56.38%), Query Frame = 1 

Query: 442 RLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKTIQTIAFLAAVYAKDGDGIQKETCGKK 501
           +L  +Q +GVK+L  L++NG  GIL D MGLGKTIQTI FL+ +     DG         
Sbjct: 201 QLKSYQLKGVKWLISLWQNGLNGILADQMGLGKTIQTIGFLSHLKGNGLDG--------- 260

Query: 502 KDPVLIVSPTSVIHNWENEFSKWA-KFSVAVYHG 561
             P L+++P S + NW NE +++    +  +YHG
Sbjct: 261 --PYLVIAPLSTLSNWFNEIARFTPSINAIIYHG 283

Query: 562  621
           
Sbjct: 321  283

Query: 622  681
           
Sbjct: 381  283

Query: 682  721
           
Sbjct: 441  283

[Close]
BLAST of MU67357 vs. TAIR10
Match: AT2G02090.1 (AT2G02090.1 SNF2 domain-containing protein / helicase domain-containing protein)

HSP 1 Score: 71.6 bits (174), Expect = 8.2e-13
Identity = 43/97 (44.33%), Postives = 49/97 (50.52%), Query Frame = 1 

Query: 445 LLEHQREGVKFLYGLYKNG-HGGILGDDMGLGKTIQTIAFLAAVYAKDGDGIQKETCGKK 504
           L  +Q  GV FL  LYK G  G IL D+MGLGKTIQ I +L  +   + D          
Sbjct: 213 LKPYQLVGVNFLLLLYKKGIEGAILADEMGLGKTIQAITYLTLLSRLNND---------- 272

Query: 505 KDPVLIVSPTSVIHNWENEFSKWA-KFSVAVYHGTNR 564
             P L+V P SV+ NWE E  KW   F+V  YHG  R
Sbjct: 273 PGPHLVVCPASVLENWERELRKWCPSFTVLQYHGAAR 299

Query: 565  624
           
Sbjct: 333  299

Query: 625  684
           
Sbjct: 393  299

Query: 685  730
           
Sbjct: 453  299

[Close]
BLAST of MU67357 vs. TAIR10
Match: AT2G18760.1 (AT2G18760.1 chromatin remodeling 8)

HSP 1 Score: 70.9 bits (172), Expect = 1.4e-12
Identity = 39/119 (32.77%), Postives = 63/119 (52.94%), Query Frame = 1 

Query: 415 VQVPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKTIQTIAFLAAVYAKDGDG 474
           + +P  I  +L ++QR GV++L+ L+    GGI+GD+MGLGKTIQ ++FL +++      
Sbjct: 375 LNIPECIFRKLFDYQRVGVQWLWELHCQRAGGIIGDEMGLGKTIQVLSFLGSLH------ 434

Query: 475 IQKETCGKKKDPVLIVSPTSVIHNWENEFSKW-AKFSVAVYHGTNRDLIYDKLEAGAIE 534
                  K   P +I+ P +++  W  E  KW   F V + H + +D  + K +  A E
Sbjct: 435 -----FSKMYKPSIIICPVTLLRQWRREAQKWYPDFHVEILHDSAQDSGHGKGQGKASE 482

Query: 535  594
           
Sbjct: 495  482

Query: 595  654
           
Sbjct: 555  482

Query: 655  714
           
Sbjct: 615  482

Query: 715  769
           
Sbjct: 675  482

[Close]
BLAST of MU67357 vs. NCBI nr
Match: gi|659094924|ref|XP_008448309.1| (PREDICTED: DNA excision repair protein ERCC-6-like 2 isoform X1 [Cucumis melo])

HSP 1 Score: 392.5 bits (1007), Expect = 5.9e-106
Identity = 195/247 (78.95%), Postives = 197/247 (79.76%), Query Frame = 1 

Query: 28  MSFQTLKETLKPCKXXXXXXXXXXXXXXXXXXFFQGSGVNFXXXXXXXXXXXXXXXXXDS 87
           MSFQTLKETLKPCK                  FFQGSGVNF                 DS
Sbjct: 1   MSFQTLKETLKPCKSLSSSASAPTSPISSNPSFFQGSGVNFLRKPPKSSLSLQLLRLQDS 60

Query: 88  FPTPENRTQCQNQLTRIRFTTXXXXXXXXXXXXXXXDLSKKRSELGLFQFDHTGLLEPLI 147
           FPTPENRTQCQNQLT++RFTT               DLSKKRSELGLFQFDHTGLLEPLI
Sbjct: 61  FPTPENRTQCQNQLTQVRFTTGEEEEEETGVEVPEPDLSKKRSELGLFQFDHTGLLEPLI 120

Query: 148 LSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKTIQTIAFLA 207
           LSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKTIQTIAFLA
Sbjct: 121 LSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKTIQTIAFLA 180

Query: 208 AVYAKDGDGIQKETCGKKKDPVLIVSPTSVIHNWENEFSKWAKFSVAVYHGTNRDLIYDK 267
           AVYAKDGDGIQKETCGKKKDPVLIVSPTSVIHNWENEFSKWAKFSVAVYHGTNRDLIYDK
Sbjct: 181 AVYAKDGDGIQKETCGKKKDPVLIVSPTSVIHNWENEFSKWAKFSVAVYHGTNRDLIYDK 240

Query: 268 LEAGAIE 327
           LEAGAIE
Sbjct: 241 LEAGAIE 247

Query: 328  387
           
Sbjct: 301  247

Query: 388  447
           
Sbjct: 361  247

Query: 448  507
           
Sbjct: 421  247

Query: 508  567
           
Sbjct: 481  247

Query: 568  627
           
Sbjct: 541  247

Query: 628  687
           
Sbjct: 601  247

Query: 688  747
           
Sbjct: 661  247

Query: 748  769
           
Sbjct: 721  247

[Close]
BLAST of MU67357 vs. NCBI nr
Match: gi|778712824|ref|XP_011656944.1| (PREDICTED: switch 2 isoform X1 [Cucumis sativus])

HSP 1 Score: 377.1 bits (967), Expect = 2.6e-101
Identity = 189/255 (74.12%), Postives = 194/255 (76.08%), Query Frame = 1 

Query: 4   FIANSTTLMSFQTLKETLKPCKXXXXXXXXXXXXXXXXXXFFQGSGVNFXXXXXXXXXXX 63
           F ANSTTLMSFQTLKETLKPCK                  FFQGS V+F           
Sbjct: 33  FFANSTTLMSFQTLKETLKPCKSLSSSASAPTSPISSNPSFFQGSEVSFLRKPPKSSLSL 92

Query: 64  XXXXXXDSFPTPENRTQCQNQLTRIRFTTXXXXXXXXXXXXXXXDLSKKRSELGLFQFDH 123
                 DSFP PE RTQCQNQ T++R  T               D+SKKRSELG FQFDH
Sbjct: 93  QLLRLQDSFPPPECRTQCQNQQTQVRVKTGEEEEEENGVEVPEPDVSKKRSELGQFQFDH 152

Query: 124 TGLLEPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKT 183
           TG  EPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKT
Sbjct: 153 TGPFEPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKT 212

Query: 184 IQTIAFLAAVYAKDGDGIQKETCGKKKDPVLIVSPTSVIHNWENEFSKWAKFSVAVYHGT 243
           IQTIAFLAAVYAKDGDGIQKETCGKKKDP+LIVSPTSVIHNWENEFSKWA FSVAVYHGT
Sbjct: 213 IQTIAFLAAVYAKDGDGIQKETCGKKKDPILIVSPTSVIHNWENEFSKWANFSVAVYHGT 272

Query: 244 NRDLIYDKLEAGAIE 303
           NRDLIYDKLEAGAIE
Sbjct: 273 NRDLIYDKLEAGAIE 287

Query: 304  363
           
Sbjct: 333  287

Query: 364  423
           
Sbjct: 393  287

Query: 424  483
           
Sbjct: 453  287

Query: 484  543
           
Sbjct: 513  287

Query: 544  603
           
Sbjct: 573  287

Query: 604  663
           
Sbjct: 633  287

Query: 664  723
           
Sbjct: 693  287

Query: 724  769
           
Sbjct: 753  287

[Close]
BLAST of MU67357 vs. NCBI nr
Match: gi|778712827|ref|XP_011656945.1| (PREDICTED: switch 2 isoform X2 [Cucumis sativus])

HSP 1 Score: 377.1 bits (967), Expect = 2.6e-101
Identity = 189/255 (74.12%), Postives = 194/255 (76.08%), Query Frame = 1 

Query: 4   FIANSTTLMSFQTLKETLKPCKXXXXXXXXXXXXXXXXXXFFQGSGVNFXXXXXXXXXXX 63
           F ANSTTLMSFQTLKETLKPCK                  FFQGS V+F           
Sbjct: 33  FFANSTTLMSFQTLKETLKPCKSLSSSASAPTSPISSNPSFFQGSEVSFLRKPPKSSLSL 92

Query: 64  XXXXXXDSFPTPENRTQCQNQLTRIRFTTXXXXXXXXXXXXXXXDLSKKRSELGLFQFDH 123
                 DSFP PE RTQCQNQ T++R  T               D+SKKRSELG FQFDH
Sbjct: 93  QLLRLQDSFPPPECRTQCQNQQTQVRVKTGEEEEEENGVEVPEPDVSKKRSELGQFQFDH 152

Query: 124 TGLLEPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKT 183
           TG  EPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKT
Sbjct: 153 TGPFEPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGGILGDDMGLGKT 212

Query: 184 IQTIAFLAAVYAKDGDGIQKETCGKKKDPVLIVSPTSVIHNWENEFSKWAKFSVAVYHGT 243
           IQTIAFLAAVYAKDGDGIQKETCGKKKDP+LIVSPTSVIHNWENEFSKWA FSVAVYHGT
Sbjct: 213 IQTIAFLAAVYAKDGDGIQKETCGKKKDPILIVSPTSVIHNWENEFSKWANFSVAVYHGT 272

Query: 244 NRDLIYDKLEAGAIE 303
           NRDLIYDKLEAGAIE
Sbjct: 273 NRDLIYDKLEAGAIE 287

Query: 304  363
           
Sbjct: 333  287

Query: 364  423
           
Sbjct: 393  287

Query: 424  483
           
Sbjct: 453  287

Query: 484  543
           
Sbjct: 513  287

Query: 544  603
           
Sbjct: 573  287

Query: 604  663
           
Sbjct: 633  287

Query: 664  723
           
Sbjct: 693  287

Query: 724  769
           
Sbjct: 753  287

[Close]
BLAST of MU67357 vs. NCBI nr
Match: gi|828320404|ref|XP_004505563.2| (PREDICTED: switch 2 [Cicer arietinum])

HSP 1 Score: 231.9 bits (590), Expect = 1.3e-57
Identity = 105/145 (72.41%), Postives = 122/145 (84.14%), Query Frame = 1 

Query: 334 SELGLFQFDHTGLLEPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFLYGLYKNGHGGI 393
           S+   FQF+HTG  EPL+LSS  + PLVQVP SINCRLLEHQR GVKFLY LYKN HGGI
Sbjct: 114 SKSSQFQFEHTGPFEPLLLSSHGELPLVQVPASINCRLLEHQRVGVKFLYDLYKNNHGGI 173

Query: 394 LGDDMGLGKTIQTIAFLAAVYAKDGDGIQKETCGKKKDPVLIVSPTSVIHNWENEFSKWA 453
           LGDDMGLGKTIQTIAFLAA++AK+G+ I  E   +K+DPVLI+ PTS+IHNWE+EFSKW+
Sbjct: 174 LGDDMGLGKTIQTIAFLAAIFAKEGESILSEKRIEKRDPVLIICPTSIIHNWESEFSKWS 233

Query: 454 KFSVAVYHGTNRDLIYDKLEAGAIE 513
            FSV++YHG NRDLIYDKLEA  +E
Sbjct: 234 NFSVSIYHGANRDLIYDKLEANGVE 258

Query: 514  573
           
Sbjct: 294  258

Query: 574  633
           
Sbjct: 354  258

Query: 634  693
           
Sbjct: 414  258

Query: 694  753
           
Sbjct: 474  258

Query: 754  769
           
Sbjct: 534  258

[Close]
BLAST of MU67357 vs. NCBI nr
Match: gi|1021490463|ref|XP_016188249.1| (PREDICTED: switch 2, partial [Arachis ipaensis])

HSP 1 Score: 230.7 bits (587), Expect = 3.0e-57
Identity = 105/156 (67.31%), Postives = 126/156 (80.77%), Query Frame = 1 

Query: 316 DLSKKRSELGL-----FQFDHTGLLEPLILSSKDDFPLVQVPPSINCRLLEHQREGVKFL 375
           +L  KR + G+     FQFDHTG  EPL+LSS  + P++QVP SINCRLLEHQREGV+FL
Sbjct: 79  ELQVKRGKFGIAKISQFQFDHTGPFEPLVLSSGGEVPVIQVPASINCRLLEHQREGVRFL 138

Query: 376 YGLYKNGHGGILGDDMGLGKTIQTIAFLAAVYAKDGDGIQKETCGKKKDPVLIVSPTSVI 435
           YGLYKN HGGILGDDMGLGKTIQ IAFLAA++ K+ D +  E   +K+DPVLI+ PTSVI
Sbjct: 139 YGLYKNNHGGILGDDMGLGKTIQAIAFLAAIFGKERDSMLGENDEEKRDPVLIICPTSVI 198

Query: 436 HNWENEFSKWAKFSVAVYHGTNRDLIYDKLEAGAIE 495
           HNWE+EFSKWA FSV++YHG NRDLI++KLEA  +E
Sbjct: 199 HNWESEFSKWANFSVSIYHGANRDLIHEKLEANGVE 234

Query: 496  555
           
Sbjct: 259  234

Query: 556  615
           
Sbjct: 319  234

Query: 616  675
           
Sbjct: 379  234

Query: 676  735
           
Sbjct: 439  234

Query: 736  769
           
Sbjct: 499  234

The following BLAST results are available for this feature:
BLAST of MU67357 vs. Swiss-Prot
Match NameE-valueIdentityDescription
CHR9_ARATH1.3e-4964.63Switch 2 OS=Arabidopsis thaliana GN=SWI2 PE=3 SV=1[more]
ER6L2_BOVIN5.0e-2041.67DNA excision repair protein ERCC-6-like 2 OS=Bos taurus GN=ERCC6L2 PE=2 SV=3[more]
ER6L2_HUMAN8.5e-2046.22DNA excision repair protein ERCC-6-like 2 OS=Homo sapiens GN=ERCC6L2 PE=1 SV=2[more]
ER6L2_MOUSE2.5e-1944.92DNA excision repair protein ERCC-6-like 2 OS=Mus musculus GN=Ercc6l2 PE=1 SV=3[more]
ERC6L_MOUSE2.6e-1644.90DNA excision repair protein ERCC-6-like OS=Mus musculus GN=Ercc6l PE=1 SV=1[more]
BLAST of MU67357 vs. TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KD05_CUCSA1.7e-9974.12Uncharacterized protein OS=Cucumis sativus GN=Csa_6G127410 PE=4 SV=1[more]
A0A0A0KD05_CUCSA1.8e+03100.00Uncharacterized protein OS=Cucumis sativus GN=Csa_6G127410 PE=4 SV=1[more]
I1LS51_SOYBN5.7e-5572.92Uncharacterized protein OS=Glycine max GN=GLYMA_12G115800 PE=4 SV=1[more]
G7JTU8_MEDTR6.3e-5474.10DNA repair and recombination RAD26-like protein, putative OS=Medicago truncatula... [more]
A0A072UMT6_MEDTR6.3e-5474.10DNA repair and recombination RAD26-like protein, putative OS=Medicago truncatula... [more]
BLAST of MU67357 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G03750.17.6e-5164.63 switch 2[more]
AT5G19310.11.7e-1344.21 Homeotic gene regulator[more]
AT5G66750.16.3e-1340.43 chromatin remodeling 1[more]
AT2G02090.18.2e-1344.33 SNF2 domain-containing protein / helicase domain-containing protein[more]
AT2G18760.11.4e-1232.77 chromatin remodeling 8[more]
BLAST of MU67357 vs. NCBI nr
Match NameE-valueIdentityDescription
gi|659094924|ref|XP_008448309.1|5.9e-10678.95PREDICTED: DNA excision repair protein ERCC-6-like 2 isoform X1 [Cucumis melo][more]
gi|778712824|ref|XP_011656944.1|2.6e-10174.12PREDICTED: switch 2 isoform X1 [Cucumis sativus][more]
gi|778712827|ref|XP_011656945.1|2.6e-10174.12PREDICTED: switch 2 isoform X2 [Cucumis sativus][more]
gi|828320404|ref|XP_004505563.2|1.3e-5772.41PREDICTED: switch 2 [Cicer arietinum][more]
gi|1021490463|ref|XP_016188249.1|3.0e-5767.31PREDICTED: switch 2, partial [Arachis ipaensis][more]
Annotated Terms
The following terms have been associated with this transcribed_cluster:
Vocabulary: INTERPRO
TermDefinition
IPR000330SNF2_N
IPR027417P-loop_NTPase
Vocabulary: Molecular Function
TermDefinition
GO:0005524ATP binding
GO Annotation
GO Assignments
This transcribed_cluster is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005524 ATP binding
Relationships

This transcribed_cluster is associated with the following gene feature(s):

Feature NameUnique NameType
MELO3C013630MELO3C013630gene


The following EST feature(s) are a part of this transcribed_cluster:

Feature NameUnique NameType
VEa0014G05VEa0014G05EST


InterPro
Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000330SNF2-related, N-terminal domainPFAMPF00176SNF2_Ncoord: 163..242
score: 1.6
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3DG3DSA:3.40.50.300coord: 141..243
score: 2.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseunknownSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 130..243
score: 1.72
NoneNo IPR availablePANTHERPTHR10799SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATEDcoord: 85..256
score: 6.7
NoneNo IPR availablePANTHERPTHR10799:SF65CHROMATIN MODIFICATION-RELATED PROTEIN EAF1coord: 85..256
score: 6.7