MU66970 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU66970
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	Serine/threonine-protein kinase STN7, chloroplastic
Location	chr9 : 8508906 .. 8509438 (+)
Sequence length	539

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CCCTTCTCCAATCCTACACAGCCATTCACCTCCACACAATCTCAAACTACCTGAAAACTAAACTGTCCTGTAACAAACAAAAAATCCAAAAATGAAATTTCGATACACGTGGTCGAAATTCAAAGCTTCTTTCATCCAATCAACTCTGTTCCCCGTTTCGGATTACTCCTTTCACTCTGTTCATCCATGGCCGCCGTTGCTGCAGCAGCAGGTGGGGTTAGTATAGGAGTGACCAACCTCCAGCTGCACCATTTGAAACAACCCACTTCGCCATTTCTCGGGAAGAAGCTCAGGTTTAAGCACAAATCGCCCTATCTTTGGACAGTATCCGTTCAGAATCCCAGAAATGTACTGGTTTCGGCTCTGGGCGGTGACCTGATACATGTGGTTCATAATCTCTTTGTGGGTGTGGGTGTGGGGCTTCCTTGTACTGTGATGGAGTGCGGTGATATCATATACAGGAGCACTTTACCCAAGTCTAATGGCTTACCCCTCACAATCCCTGGTGCCATTCTGGCTTTGGGTACTCTTTTCTTATC

Library


Library category	ESTs
melon CM-VEa library	1

Homology

[Close]

BLAST of MU66970 vs. Swiss-Prot
Match: STT7_ARATH (Serine/threonine-protein kinase STN7, chloroplastic OS=Arabidopsis thaliana GN=STN7 PE=1 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.5e-20
Identity = 56/89 (62.92%), Postives = 59/89 (66.29%), Query Frame = 1


Query: 268 SPFLGKKLR-FKHKSPYLWTVSVQNPRNVLVSALGGDLIHVVHNLFVGVGVGLPCTVMEC 327
           SPFLGKKL+ F   SP L       P   L S+    LI  VHNLF+GVGVGLPCTVMEC
Sbjct: 15  SPFLGKKLKPFSLTSPILSF----KPTVKLNSSCRAQLIDTVHNLFIGVGVGLPCTVMEC 74

Query: 328 GDIIYRSTLPKSNGLPLTIPGAILALGTL 387
           GD+IYRSTLPKSNGL +T PG  LAL  L
Sbjct: 75  GDMIYRSTLPKSNGLTITAPGVALALTAL 99

Query: 388  447
           
Sbjct: 135  99

Query: 448  507
           
Sbjct: 195  99

Query: 508  532
           
Sbjct: 255  99

[Close]

BLAST of MU66970 vs. TrEMBL
Match: A0A0A0L2X0_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_3G067770 PE=3 SV=1)

HSP 1 Score: 194.9 bits (494), Expect = 8.4e-47
Identity = 93/100 (93.00%), Postives = 96/100 (96.00%), Query Frame = 1


Query: 232 TNLQLHHLKQPTSPFLGKKLRFKHKSPYLWTVSVQNPRNVLVSALGGDLIHVVHNLFVGV 291
           TNLQLHHLKQP SPFLGKKLRFKHK P+LWTVSVQNPRNVLVSALG D+IH+VHNLFVGV
Sbjct: 16  TNLQLHHLKQPNSPFLGKKLRFKHKPPHLWTVSVQNPRNVLVSALGADMIHMVHNLFVGV 75

Query: 292 GVGLPCTVMECGDIIYRSTLPKSNGLPLTIPGAILALGTL 351
           GVGLPCTVMECGDIIYRSTLPKSNGL LTIPGAILALGTL
Sbjct: 76  GVGLPCTVMECGDIIYRSTLPKSNGLTLTIPGAILALGTL 115

Query: 352  411
           
Sbjct: 136  115

Query: 412  471
           
Sbjct: 196  115

Query: 472  531
           
Sbjct: 256  115

[Close]

BLAST of MU66970 vs. TrEMBL
Match: M5Y1Y3_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025555mg PE=3 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 1.4e-25
Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 1


Query: 241 QLH-HLKQPTSPFLGKKLRFKHKS----PYLWTVSVQNPRNVLVSALGG-DLIHVVHNLF 300
           +LH H  +PTSPFLGKKLR    S    P   +++V NP+ +LV A GG +LIH V +LF
Sbjct: 16  KLHPHKSKPTSPFLGKKLRINKPSFEPHPSSRSMTVSNPKALLVFASGGGELIHAVQDLF 75

Query: 301 VGVGVGLPCTVMECGDIIYRSTLPKSNGLPLTIPGAILALGTL 360
           +GVGVGLPCTVMECGDIIYRSTLPKSNGL LT PGAILAL  L
Sbjct: 76  LGVGVGLPCTVMECGDIIYRSTLPKSNGLTLTAPGAILALSAL 118

Query: 361  420
           
Sbjct: 136  118

Query: 421  480
           
Sbjct: 196  118

Query: 481  532
           
Sbjct: 256  118

[Close]

BLAST of MU66970 vs. TrEMBL
Match: A0A151RU26_CAJCA (Uncharacterized protein OS=Cajanus cajan GN=KK1_032405 PE=3 SV=1)

HSP 1 Score: 117.5 bits (293), Expect = 1.7e-23
Identity = 60/102 (58.82%), Postives = 74/102 (72.55%), Query Frame = 1


Query: 232 TNLQLHHLKQPTSPFLGKKLRFKHKSPYLW--TVSVQNPRNVLVSALGGDLIHVVHNLFV 291
           T LQ H  K   S FLG++LR +         + SV NP+ V V ALGG+ +  VHNLFV
Sbjct: 14  TKLQPHKPKHNKSLFLGQRLRIRPSGEAQCGASFSVSNPKVVQVFALGGEWVDTVHNLFV 73

Query: 292 GVGVGLPCTVMECGDIIYRSTLPKSNGLPLTIPGAILALGTL 351
           GVGVGLPC+VM+CGD+IYRSTLP+S+GL LT+PG +LALGTL
Sbjct: 74  GVGVGLPCSVMQCGDVIYRSTLPRSSGLTLTVPGVVLALGTL 115

Query: 352  411
           
Sbjct: 134  115

Query: 412  471
           
Sbjct: 194  115

Query: 472  531
           
Sbjct: 254  115

[Close]

BLAST of MU66970 vs. TrEMBL
Match: U5G228_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s13970g PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-22
Identity = 61/101 (60.40%), Postives = 71/101 (70.30%), Query Frame = 1


Query: 238 LQLH--HLKQPTSPFLGKKLRFKHKSPYLWTVSVQNPRNVLVSALGG-DLIHVVHNLFVG 297
           ++LH  H  +P SPFLGKKL  K   PY  T     P+ + V A  G + +  VHNLF+G
Sbjct: 16  IKLHSTHKPKPPSPFLGKKLNLK---PYSRTTITSKPKTLAVVASSGVEFLDAVHNLFLG 75

Query: 298 VGVGLPCTVMECGDIIYRSTLPKSNGLPLTIPGAILALGTL 357
           V VGLPCTVMECGDIIYRSTLPK +GL LT+PGA LALGTL
Sbjct: 76  VDVGLPCTVMECGDIIYRSTLPKPSGLTLTVPGAALALGTL 113

Query: 358  417
           
Sbjct: 136  113

Query: 418  477
           
Sbjct: 196  113

Query: 478  532
           
Sbjct: 256  113

[Close]

BLAST of MU66970 vs. TrEMBL
Match: A0A103YA68_CYNCS (Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_016334 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.4e-22
Identity = 60/103 (58.25%), Postives = 77/103 (74.76%), Query Frame = 1


Query: 235 NLQLHHLKQ-PTSPFLGKKLRFKHKSPY---LWTVSVQNPRNVLVSALGGDLIHVVHNLF 294
           +++LH L   P  PFLGKK +F+ +S      +T+   N R+ +V+  G +L+  VHN+F
Sbjct: 16  SVKLHSLNSLPPCPFLGKKFKFRQESTSHGSKFTILRPNSRSTIVA--GVELVDFVHNVF 75

Query: 295 VGVGVGLPCTVMECGDIIYRSTLPKSNGLPLTIPGAILALGTL 354
           VGVGVGLPCTVMECGD+IYRSTLP+SN L LTIPGA+LALGTL
Sbjct: 76  VGVGVGLPCTVMECGDMIYRSTLPRSNALTLTIPGAVLALGTL 116

Query: 355  414
           
Sbjct: 136  116

Query: 415  474
           
Sbjct: 196  116

Query: 475  532
           
Sbjct: 256  116

[Close]

BLAST of MU66970 vs. TAIR10
Match: AT1G68830.1 (AT1G68830.1 STT7 homolog STN7)

HSP 1 Score: 100.1 bits (248), Expect = 1.4e-21
Identity = 56/89 (62.92%), Postives = 59/89 (66.29%), Query Frame = 1


Query: 268 SPFLGKKLR-FKHKSPYLWTVSVQNPRNVLVSALGGDLIHVVHNLFVGVGVGLPCTVMEC 327
           SPFLGKKL+ F   SP L       P   L S+    LI  VHNLF+GVGVGLPCTVMEC
Sbjct: 15  SPFLGKKLKPFSLTSPILSF----KPTVKLNSSCRAQLIDTVHNLFIGVGVGLPCTVMEC 74

Query: 328 GDIIYRSTLPKSNGLPLTIPGAILALGTL 387
           GD+IYRSTLPKSNGL +T PG  LAL  L
Sbjct: 75  GDMIYRSTLPKSNGLTITAPGVALALTAL 99

Query: 388  447
           
Sbjct: 135  99

Query: 448  507
           
Sbjct: 195  99

Query: 508  532
           
Sbjct: 255  99

[Close]

BLAST of MU66970 vs. NCBI nr
Match: gi|659131523|ref|XP_008465727.1| (PREDICTED: serine/threonine-protein kinase STN7, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 204.9 bits (520), Expect = 1.2e-49
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 1


Query: 232 TNLQLHHLKQPTSPFLGKKLRFKHKSPYLWTVSVQNPRNVLVSALGGDLIHVVHNLFVGV 291
           TNLQLHHLKQPTSPFLGKKLRFKHKSPYLWTVSVQNPRNVLVSALGGDLIHVVHNLFVGV
Sbjct: 16  TNLQLHHLKQPTSPFLGKKLRFKHKSPYLWTVSVQNPRNVLVSALGGDLIHVVHNLFVGV 75

Query: 292 GVGLPCTVMECGDIIYRSTLPKSNGLPLTIPGAILALGTL 351
           GVGLPCTVMECGDIIYRSTLPKSNGL LTIPGAILALGTL
Sbjct: 76  GVGLPCTVMECGDIIYRSTLPKSNGLTLTIPGAILALGTL 115

Query: 352  411
           
Sbjct: 136  115

Query: 412  471
           
Sbjct: 196  115

Query: 472  531
           
Sbjct: 256  115

[Close]

BLAST of MU66970 vs. NCBI nr
Match: gi|659131521|ref|XP_008465726.1| (PREDICTED: serine/threonine-protein kinase STN7, chloroplastic isoform X1 [Cucumis melo])

HSP 1 Score: 204.9 bits (520), Expect = 1.2e-49
Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 1


Query: 232 TNLQLHHLKQPTSPFLGKKLRFKHKSPYLWTVSVQNPRNVLVSALGGDLIHVVHNLFVGV 291
           TNLQLHHLKQPTSPFLGKKLRFKHKSPYLWTVSVQNPRNVLVSALGGDLIHVVHNLFVGV
Sbjct: 16  TNLQLHHLKQPTSPFLGKKLRFKHKSPYLWTVSVQNPRNVLVSALGGDLIHVVHNLFVGV 75

Query: 292 GVGLPCTVMECGDIIYRSTLPKSNGLPLTIPGAILALGTL 351
           GVGLPCTVMECGDIIYRSTLPKSNGL LTIPGAILALGTL
Sbjct: 76  GVGLPCTVMECGDIIYRSTLPKSNGLTLTIPGAILALGTL 115

Query: 352  411
           
Sbjct: 136  115

Query: 412  471
           
Sbjct: 196  115

Query: 472  531
           
Sbjct: 256  115

[Close]

BLAST of MU66970 vs. NCBI nr
Match: gi|449452072|ref|XP_004143784.1| (PREDICTED: serine/threonine-protein kinase STN7, chloroplastic isoform X1 [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 1.2e-46
Identity = 93/100 (93.00%), Postives = 96/100 (96.00%), Query Frame = 1


Query: 232 TNLQLHHLKQPTSPFLGKKLRFKHKSPYLWTVSVQNPRNVLVSALGGDLIHVVHNLFVGV 291
           TNLQLHHLKQP SPFLGKKLRFKHK P+LWTVSVQNPRNVLVSALG D+IH+VHNLFVGV
Sbjct: 16  TNLQLHHLKQPNSPFLGKKLRFKHKPPHLWTVSVQNPRNVLVSALGADMIHMVHNLFVGV 75

Query: 292 GVGLPCTVMECGDIIYRSTLPKSNGLPLTIPGAILALGTL 351
           GVGLPCTVMECGDIIYRSTLPKSNGL LTIPGAILALGTL
Sbjct: 76  GVGLPCTVMECGDIIYRSTLPKSNGLTLTIPGAILALGTL 115

Query: 352  411
           
Sbjct: 136  115

Query: 412  471
           
Sbjct: 196  115

Query: 472  531
           
Sbjct: 256  115

[Close]

BLAST of MU66970 vs. NCBI nr
Match: gi|778675988|ref|XP_011650513.1| (PREDICTED: serine/threonine-protein kinase STN7, chloroplastic isoform X2 [Cucumis sativus])

HSP 1 Score: 194.9 bits (494), Expect = 1.2e-46
Identity = 93/100 (93.00%), Postives = 96/100 (96.00%), Query Frame = 1


Query: 232 TNLQLHHLKQPTSPFLGKKLRFKHKSPYLWTVSVQNPRNVLVSALGGDLIHVVHNLFVGV 291
           TNLQLHHLKQP SPFLGKKLRFKHK P+LWTVSVQNPRNVLVSALG D+IH+VHNLFVGV
Sbjct: 16  TNLQLHHLKQPNSPFLGKKLRFKHKPPHLWTVSVQNPRNVLVSALGADMIHMVHNLFVGV 75

Query: 292 GVGLPCTVMECGDIIYRSTLPKSNGLPLTIPGAILALGTL 351
           GVGLPCTVMECGDIIYRSTLPKSNGL LTIPGAILALGTL
Sbjct: 76  GVGLPCTVMECGDIIYRSTLPKSNGLTLTIPGAILALGTL 115

Query: 352  411
           
Sbjct: 136  115

Query: 412  471
           
Sbjct: 196  115

Query: 472  531
           
Sbjct: 256  115

[Close]

BLAST of MU66970 vs. NCBI nr
Match: gi|645276190|ref|XP_008243170.1| (PREDICTED: serine/threonine-protein kinase STN7, chloroplastic [Prunus mume])

HSP 1 Score: 125.9 bits (315), Expect = 6.9e-26
Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 1


Query: 241 QLH-HLKQPTSPFLGKKLRFKHKS----PYLWTVSVQNPRNVLVSALGG-DLIHVVHNLF 300
           +LH H  +PTSPFLGKKLR    S    P   +++V NP+ +LV A GG +LIH V +LF
Sbjct: 16  KLHPHKSKPTSPFLGKKLRINKPSFEPHPSSRSITVSNPKTLLVFASGGGELIHAVQDLF 75

Query: 301 VGVGVGLPCTVMECGDIIYRSTLPKSNGLPLTIPGAILALGTL 360
           +GVGVGLPCTVMECGDIIYRSTLPKSNGL LT PGAILAL  L
Sbjct: 76  LGVGVGLPCTVMECGDIIYRSTLPKSNGLTLTAPGAILALSAL 118

Query: 361  420
           
Sbjct: 136  118

Query: 421  480
           
Sbjct: 196  118

Query: 481  532
           
Sbjct: 256  118

The following BLAST results are available for this feature:

BLAST of MU66970 vs. Swiss-Prot


Match Name	E-value	Identity	Description
STT7_ARATH	2.5e-20	62.92	Serine/threonine-protein kinase STN7, chloroplastic OS=Arabidopsis thaliana GN=S...	[more]

BLAST of MU66970 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0L2X0_CUCSA	8.4e-47	93.00	Uncharacterized protein OS=Cucumis sativus GN=Csa_3G067770 PE=3 SV=1	[more]
M5Y1Y3_PRUPE	1.4e-25	66.02	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa025555mg PE=3 SV=1	[more]
A0A151RU26_CAJCA	1.7e-23	58.82	Uncharacterized protein OS=Cajanus cajan GN=KK1_032405 PE=3 SV=1	[more]
U5G228_POPTR	1.4e-22	60.40	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0010s13970g PE=4 SV=1	[more]
A0A103YA68_CYNCS	1.4e-22	58.25	Uncharacterized protein OS=Cynara cardunculus var. scolymus GN=Ccrd_016334 PE=4 ...	[more]

BLAST of MU66970 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G68830.1	1.4e-21	62.92	STT7 homolog STN7	[more]

BLAST of MU66970 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659131523\|ref\|XP_008465727.1\|	1.2e-49	99.00	PREDICTED: serine/threonine-protein kinase STN7, chloroplastic isoform X2 [Cucum...	[more]
gi\|659131521\|ref\|XP_008465726.1\|	1.2e-49	99.00	PREDICTED: serine/threonine-protein kinase STN7, chloroplastic isoform X1 [Cucum...	[more]
gi\|449452072\|ref\|XP_004143784.1\|	1.2e-46	93.00	PREDICTED: serine/threonine-protein kinase STN7, chloroplastic isoform X1 [Cucum...	[more]
gi\|778675988\|ref\|XP_011650513.1\|	1.2e-46	93.00	PREDICTED: serine/threonine-protein kinase STN7, chloroplastic isoform X2 [Cucum...	[more]
gi\|645276190\|ref\|XP_008243170.1\|	6.9e-26	66.02	PREDICTED: serine/threonine-protein kinase STN7, chloroplastic [Prunus mume]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C002949	MELO3C002949	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
VEa0007J13	VEa0007J13	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11584	SERINE/THREONINE PROTEIN KINASE	coord: 30..112 score: 1.7
None	No IPR available	PANTHER	PTHR11584:SF316	SERINE/THREONINE-PROTEIN KINASE STN7, CHLOROPLASTIC	coord: 30..112 score: 1.7