MU66962 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU66962
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	U11/U12 small nuclear ribonucleoprotein 48 kDa protein
Location	chr2 : 13299272 .. 13299945 (-)
Sequence length	681

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

CTCAGAAAGCTCCCACGAATTTCAGAATGAGAGCCGTCAACCCTTCCCTTCCATTTCCTCCTAACCAAACTTTCCCCAGTTTCCTTCCTCCAAACCCTAACCCTAATTCCCATATCCATGATTCTTCGCATTCTGAATCTCAACATCCTTCTCTCGACTTGCCTTCTTCCTTTTCCTCCCTCAATACCCTCATCCATCTCGCTAATCAAACCCTTGAATCTCTCTCCTACCTCACCCCATCTGTTTTCGCGAACCATTCTCGTCTCCTTCACTGCTATTTTGATCGGCGCCACCGTGTCCCCCCGCATTCTCTCTTCCGTCACTCCCTCCTCTGCCCTTCTGCTTCCCTGCATCCTATTGACCCCACCCAACTTTTTCAATCCTTGCTTTACCCCCAAACGCTTCAGTCATCTCATCAATTGGTTAATGAAAACCGCTTCTCTCAAGTTCTCCCGGATTCGGATGCAGACCTTTGCTTTTCTCTCACTGATTATACTGATGCCACTTCCAATTTCTTCTATGCTGATTGCCCTGGCGTCGTTGCATTGTCTAACCTTGATGGAAATGTCCAAAGTCTTCACACTTCCCCGTGTTTTGGCCGTTCATTGTGCTAATTTTGTCGGTAATGACCATTTAGAGATGAATAGTACTTGGAAATGGGATACGAATACTTCCCTTCTG

Library


Library category	ESTs
melon CM-VEa library	1

Homology

[Close]

BLAST of MU66962 vs. Swiss-Prot
Match: U1148_ARATH (U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Arabidopsis thaliana GN=SNRNP48 PE=2 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.6e-14
Identity = 54/141 (38.30%), Postives = 68/141 (48.23%), Query Frame = 3


Query: 186 TLIHLANQTLESLSYLTPSVFANHSRLLH---------CYFDRRHRVPPHSLFRHSLLCP 245
           +L+    +TL+SLS    ++  +HS LL          C FD  H +PP +LF HSL CP
Sbjct: 66  SLLSECQRTLDSLSQ---NLALDHSSLLQKDENGCFVRCPFDSNHFMPPEALFLHSLRCP 125

Query: 246 SASLHPIDPTQLFQSLL-YPQTLQSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNF 305
           +     +D   L +S   Y  TL+   +L   N         D DLC SL D  D  SNF
Sbjct: 126 NT----LDLIHLLESFSSYRNTLELPCELQLNN--------GDGDLCISLDDLADFGSNF 185

Query: 306 FYADCPGVVALSNLDGNVQSL 365
           FY DCPG V  S LDG  ++L
Sbjct: 186 FYRDCPGAVKFSELDGKKRTL 191

Query: 366  425
           
Sbjct: 246  191

Query: 426  485
           
Sbjct: 306  191

Query: 486  545
           
Sbjct: 366  191

Query: 546  579
           
Sbjct: 426  191

HSP 2 Score: 29.6 bits (65), Expect = 5.3e+01
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 1


Query: 571 KVFTLPRVLAVHCANFVGND 630
           +  TLP VL+V C++FVG+D
Sbjct: 189 RTLTLPHVLSVECSDFVGSD 208

[Close]

BLAST of MU66962 vs. TrEMBL
Match: A0A0A0M085_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G662780 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 3.4e-77
Identity = 144/178 (80.90%), Postives = 150/178 (84.27%), Query Frame = 3


Query: 27  MRAVNPSLPFPPNQTFPSFLXXXXXXXSHIHDSSHSESQHXXXXXXXXXXXXNTLIHLAN 86
           MRA+NPSLPFPP QTFP+FL       SHIHDSSHS+SQH            N LIH AN
Sbjct: 1   MRAINPSLPFPPYQTFPNFLPPNPNPNSHIHDSSHSQSQHPPLDLSSSFSSLNNLIHFAN 60

Query: 87  QTLESLSYLTPSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQLFQSL 146
           QTL+SLSYLTPS FANHS LLHC+FDRRHRVPPHSLFRHSLLCPSASL PIDPTQLFQSL
Sbjct: 61  QTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLLPIDPTQLFQSL 120

Query: 147 LYPQTLQSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSNLD 206
           LYPQTL SS QLVNENRFSQVLPDSDADLCFSLTDY+DATSNFFY DCPGVVALSNLD
Sbjct: 121 LYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLD 178

Query: 207  266
           
Sbjct: 181  178

Query: 267  326
           
Sbjct: 241  178

Query: 327  386
           
Sbjct: 301  178

Query: 387  446
           
Sbjct: 361  178

Query: 447  506
           
Sbjct: 421  178

Query: 507  561
           
Sbjct: 481  178

[Close]

BLAST of MU66962 vs. TrEMBL
Match: A0A0A0M085_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G662780 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 2.2e-07
Identity = 30/32 (93.75%), Postives = 30/32 (93.75%), Query Frame = 1


Query: 556 LMEMSKVFTLPRVLAVHCANFVGNDHLEMNST 615
           L EMSKVFTLPRVLAVHCANFVGNDH EMNST
Sbjct: 177 LDEMSKVFTLPRVLAVHCANFVGNDHFEMNST 208

Query: 616  652
           
Sbjct: 237  208

HSP 2 Score: 105.9 bits (263), Expect = 6.5e-20
Identity = 66/184 (35.87%), Postives = 89/184 (48.37%), Query Frame = 3


Query: 15  TNFRMRAVNPSLPFPPNQTFPSFLXXXXXXXSHIHDSSHSESQHXXXXXXXXXXXXNTLI 74
           + F    +NP+  F   Q  PS         S  H      SQ               LI
Sbjct: 10  STFSFNPINPNPNFSNPQFNPSLPLPLPPSQSQFH------SQTPLPDLPNSLSSLKNLI 69

Query: 75  HLANQTLESLSYLTPSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQL 134
             +N  L+SLS     +  + + L+ C  +  H VPP SLF H+L CPS+    +D   L
Sbjct: 70  KSSNSILQSLSSTISPLSLSSNSLIQCPSNPHHWVPPSSLFLHTLHCPSS----LDVNDL 129

Query: 135 FQSLLYPQTLQSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSN 194
             SL YP+TL+S   L+++N+F Q L D  ++LCFSL DY D  SNFFY  C GVV+  N
Sbjct: 130 LDSLQYPKTLKSDQNLIDQNKFVQPLNDPTSELCFSLDDYVDFGSNFFYQGCHGVVSSLN 183

Query: 195 LDGN 254
            D +
Sbjct: 190 DDAS 183

Query: 255  314
           
Sbjct: 250  183

Query: 315  374
           
Sbjct: 310  183

Query: 375  434
           
Sbjct: 370  183

Query: 435  494
           
Sbjct: 430  183

Query: 495  554
           
Sbjct: 490  183

Query: 555  567
           
Sbjct: 550  183

[Close]

BLAST of MU66962 vs. TrEMBL
Match: A0A0J8CJJ6_BETVU (Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g077030 PE=4 SV=1)

HSP 1 Score: 35.4 bits (80), Expect = 1.1e+02
Identity = 14/23 (60.87%), Postives = 18/23 (78.26%), Query Frame = 1


Query: 571 KVFTLPRVLAVHCANFVGNDHLE 630
           ++FTLP +L+V CANFVGN   E
Sbjct: 185 RIFTLPGILSVECANFVGNSDRE 207

Query: 631  640
           
Sbjct: 245  207

HSP 2 Score: 104.8 bits (260), Expect = 1.4e-19
Identity = 56/125 (44.80%), Postives = 77/125 (61.60%), Query Frame = 3


Query: 186 TLIHLANQTLESLSYLTPSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDP 245
           +L+  +N TL+SLS L P +  +   L+ C  +  H VPP+SLF HSL CPS+    +D 
Sbjct: 62  SLLQSSNSTLQSLSSLLPPLSLSSDSLIQCPSNPNHWVPPNSLFLHSLHCPSS----LDL 121

Query: 246 TQLFQSLLYPQTLQSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVA 305
                SL YP+TL+S   L+ +N+F Q L D  ++LCFSL DY D  SNFFY  C GVV+
Sbjct: 122 GTDLDSLQYPKTLKSEQHLIQQNKFVQPLNDPTSELCFSLDDYVDFGSNFFYQGCLGVVS 181

Query: 306 LSNLD 365
            ++ D
Sbjct: 182 SADDD 182

Query: 366  425
           
Sbjct: 242  182

Query: 426  485
           
Sbjct: 302  182

Query: 486  545
           
Sbjct: 362  182

Query: 546  561
           
Sbjct: 422  182

[Close]

BLAST of MU66962 vs. TrEMBL
Match: A0A0K9QID6_SPIOL (Uncharacterized protein OS=Spinacia oleracea GN=SOVF_181880 PE=4 SV=1)

HSP 1 Score: 36.2 bits (82), Expect = 6.3e+01
Identity = 15/29 (51.72%), Postives = 20/29 (68.97%), Query Frame = 1


Query: 571 KVFTLPRVLAVHCANFVGNDHLEMNSTWK 630
           ++FTLP VL+V CANFVG    E +  W+
Sbjct: 186 RIFTLPGVLSVECANFVGVSDRETDGFWE 214

Query: 631  658
           
Sbjct: 246  214

HSP 2 Score: 104.8 bits (260), Expect = 1.4e-19
Identity = 57/113 (50.44%), Postives = 71/113 (62.83%), Query Frame = 3


Query: 240 SVFANHSRLLHCY-------FDRRHRVPPHSLFRHSLLCPSASLHPIDPTQLFQSLLYPQ 299
           +V + H+ L HC        FD RHR+PP  LFRH L CPS+   P+DP+ + QSL YP+
Sbjct: 51  AVTSPHNLLHHCSAALSPCPFDPRHRMPPEFLFRHHLRCPSSHFPPLDPS-ILQSLRYPR 110

Query: 300 TLQSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSNL 359
           TLQS     + N F Q L DS+++LCFSL  + D  SNFFY DCPGVV L  L
Sbjct: 111 TLQSQ----SPNSFLQPLRDSNSELCFSLDQFGDFGSNFFYRDCPGVVELDRL 158

Query: 360  419
           
Sbjct: 171  158

Query: 420  479
           
Sbjct: 231  158

Query: 480  539
           
Sbjct: 291  158

Query: 540  558
           
Sbjct: 351  158

[Close]

BLAST of MU66962 vs. TrEMBL
Match: M5W6C9_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001825mg PE=4 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 4.2e-19
Identity = 68/141 (48.23%), Postives = 82/141 (58.16%), Query Frame = 3


Query: 183 NTLIHLANQTLESLSYLTPSVFANH----SRLLHCYFDRRHRVPPHSLFRHSLLCPSASL 242
           ++L+  + QTL+SLS L P    N+    S L+ C F+  HRV PHSLF HSL CPS   
Sbjct: 56  DSLVRDSYQTLDSLSALLPLQNPNYDNPQSSLIPCPFNPHHRVHPHSLFSHSLHCPSHP- 115

Query: 243 HPIDPTQLFQSLLYPQTLQSSHQLVNENRFSQVLPDSDADLCFSLTD-YTDATSNFFYAD 302
           HP+        L YP+TL+SS Q   E  F Q L  S+ADL  SL   Y D  SNFFY+D
Sbjct: 116 HPL------PHLNYPKTLKSSDQSQTEKSFLQTLHGSEADLRLSLEHYYADFGSNFFYSD 175

Query: 303 CPGVVALSNLDGNVQSLHTSP 362
           CPGVV  S LDG V  + T P
Sbjct: 176 CPGVVNFSGLDG-VNRMFTLP 188

Query: 363  422
           
Sbjct: 236  188

Query: 423  482
           
Sbjct: 296  188

Query: 483  542
           
Sbjct: 356  188

Query: 543  591
           
Sbjct: 416  188

[Close]

BLAST of MU66962 vs. TAIR10
Match: AT3G04160.2 (AT3G04160.2 unknown protein)

HSP 1 Score: 79.0 bits (193), Expect = 4.3e-15
Identity = 54/141 (38.30%), Postives = 68/141 (48.23%), Query Frame = 3


Query: 186 TLIHLANQTLESLSYLTPSVFANHSRLLH---------CYFDRRHRVPPHSLFRHSLLCP 245
           +L+    +TL+SLS    ++  +HS LL          C FD  H +PP +LF HSL CP
Sbjct: 66  SLLSECQRTLDSLSQ---NLALDHSSLLQKDENGCFVRCPFDSNHFMPPEALFLHSLRCP 125

Query: 246 SASLHPIDPTQLFQSLL-YPQTLQSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNF 305
           +     +D   L +S   Y  TL+   +L   N         D DLC SL D  D  SNF
Sbjct: 126 NT----LDLIHLLESFSSYRNTLELPCELQLNN--------GDGDLCISLDDLADFGSNF 185

Query: 306 FYADCPGVVALSNLDGNVQSL 365
           FY DCPG V  S LDG  ++L
Sbjct: 186 FYRDCPGAVKFSELDGKKRTL 191

Query: 366  425
           
Sbjct: 246  191

Query: 426  485
           
Sbjct: 306  191

Query: 486  545
           
Sbjct: 366  191

Query: 546  579
           
Sbjct: 426  191

HSP 2 Score: 29.6 bits (65), Expect = 3.0e+00
Identity = 11/20 (55.00%), Postives = 14/20 (70.00%), Query Frame = 1


Query: 571 KVFTLPRVLAVHCANFVGND 630
           +  TLP VL+V C++FVG+D
Sbjct: 189 RTLTLPHVLSVECSDFVGSD 208

[Close]

BLAST of MU66962 vs. NCBI nr
Match: gi|659086077|ref|XP_008443753.1| (PREDICTED: uncharacterized protein LOC103487266 [Cucumis melo])

HSP 1 Score: 319.7 bits (818), Expect = 4.1e-84
Identity = 158/178 (88.76%), Postives = 158/178 (88.76%), Query Frame = 3


Query: 27  MRAVNPSLPFPPNQTFPSFLXXXXXXXSHIHDSSHSESQHXXXXXXXXXXXXNTLIHLAN 86
           MRAVNPSLPFPPNQTFPSFL       SHIHDSSHSESQH            NTLIHLAN
Sbjct: 1   MRAVNPSLPFPPNQTFPSFLPPNPNPNSHIHDSSHSESQHPSLDLPSSFSSLNTLIHLAN 60

Query: 87  QTLESLSYLTPSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQLFQSL 146
           QTLESLSYLTPSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQLFQSL
Sbjct: 61  QTLESLSYLTPSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQLFQSL 120

Query: 147 LYPQTLQSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSNLD 206
           LYPQTL SSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSNLD
Sbjct: 121 LYPQTLHSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSNLD 178

Query: 207  266
           
Sbjct: 181  178

Query: 267  326
           
Sbjct: 241  178

Query: 327  386
           
Sbjct: 301  178

Query: 387  446
           
Sbjct: 361  178

Query: 447  506
           
Sbjct: 421  178

Query: 507  561
           
Sbjct: 481  178

[Close]

BLAST of MU66962 vs. NCBI nr
Match: gi|778664187|ref|XP_011660240.1| (PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1 [Cucumis sativus])

HSP 1 Score: 292.4 bits (747), Expect = 7.0e-76
Identity = 144/178 (80.90%), Postives = 150/178 (84.27%), Query Frame = 3


Query: 27  MRAVNPSLPFPPNQTFPSFLXXXXXXXSHIHDSSHSESQHXXXXXXXXXXXXNTLIHLAN 86
           MRA+NPSLPFPP QTFP+FL       SHIHDSSHS+SQH            N LIH AN
Sbjct: 1   MRAINPSLPFPPYQTFPNFLPPNPNPNSHIHDSSHSQSQHPPLDLSSSFSSLNNLIHFAN 60

Query: 87  QTLESLSYLTPSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQLFQSL 146
           QTL+SLSYLTPS FANHS LLHC+FDRRHRVPPHSLFRHSLLCPSASL PIDPTQLFQSL
Sbjct: 61  QTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLLPIDPTQLFQSL 120

Query: 147 LYPQTLQSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSNLD 206
           LYPQTL SS QLVNENRFSQVLPDSDADLCFSLTDY+DATSNFFY DCPGVVALSNLD
Sbjct: 121 LYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLD 178

Query: 207  266
           
Sbjct: 181  178

Query: 267  326
           
Sbjct: 241  178

Query: 327  386
           
Sbjct: 301  178

Query: 387  446
           
Sbjct: 361  178

Query: 447  506
           
Sbjct: 421  178

Query: 507  561
           
Sbjct: 481  178

[Close]

BLAST of MU66962 vs. NCBI nr
Match: gi|778664192|ref|XP_004142553.2| (PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 [Cucumis sativus])

HSP 1 Score: 292.4 bits (747), Expect = 7.0e-76
Identity = 144/178 (80.90%), Postives = 150/178 (84.27%), Query Frame = 3


Query: 27  MRAVNPSLPFPPNQTFPSFLXXXXXXXSHIHDSSHSESQHXXXXXXXXXXXXNTLIHLAN 86
           MRA+NPSLPFPP QTFP+FL       SHIHDSSHS+SQH            N LIH AN
Sbjct: 1   MRAINPSLPFPPYQTFPNFLPPNPNPNSHIHDSSHSQSQHPPLDLSSSFSSLNNLIHFAN 60

Query: 87  QTLESLSYLTPSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHPIDPTQLFQSL 146
           QTL+SLSYLTPS FANHS LLHC+FDRRHRVPPHSLFRHSLLCPSASL PIDPTQLFQSL
Sbjct: 61  QTLQSLSYLTPSDFANHSHLLHCHFDRRHRVPPHSLFRHSLLCPSASLLPIDPTQLFQSL 120

Query: 147 LYPQTLQSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPGVVALSNLD 206
           LYPQTL SS QLVNENRFSQVLPDSDADLCFSLTDY+DATSNFFY DCPGVVALSNLD
Sbjct: 121 LYPQTLHSSRQLVNENRFSQVLPDSDADLCFSLTDYSDATSNFFYVDCPGVVALSNLD 178

Query: 207  266
           
Sbjct: 181  178

Query: 267  326
           
Sbjct: 241  178

Query: 327  386
           
Sbjct: 301  178

Query: 387  446
           
Sbjct: 361  178

Query: 447  506
           
Sbjct: 421  178

Query: 507  561
           
Sbjct: 481  178

[Close]

BLAST of MU66962 vs. NCBI nr
Match: gi|645222904|ref|XP_008218377.1| (PREDICTED: uncharacterized protein LOC103318737 [Prunus mume])

HSP 1 Score: 106.7 bits (265), Expect = 5.5e-20
Identity = 69/141 (48.94%), Postives = 83/141 (58.87%), Query Frame = 3


Query: 183 NTLIHLANQTLESLSYLTPSVFANH----SRLLHCYFDRRHRVPPHSLFRHSLLCPSASL 242
           ++L+  + QTL+SLS L P    N+    S L+ C F+  HRV PHSLF HSL CPS   
Sbjct: 56  DSLVRDSYQTLDSLSALLPLENPNYNNPQSSLIPCPFNPHHRVQPHSLFSHSLHCPSHP- 115

Query: 243 HPIDPTQLFQSLLYPQTLQSSHQLVNENRFSQVLPDSDADLCFSLTD-YTDATSNFFYAD 302
           HP+        L YP+TL+SS Q   E  F Q L  S+ADLC SL   Y D  SNFFY+D
Sbjct: 116 HPL------PHLNYPKTLKSSDQSQIEKSFLQTLHGSEADLCLSLEHYYADFGSNFFYSD 175

Query: 303 CPGVVALSNLDGNVQSLHTSP 362
           CPGVV  S LDG V  + T P
Sbjct: 176 CPGVVNFSGLDG-VNRMFTLP 188

Query: 363  422
           
Sbjct: 236  188

Query: 423  482
           
Sbjct: 296  188

Query: 483  542
           
Sbjct: 356  188

Query: 543  591
           
Sbjct: 416  188

[Close]

BLAST of MU66962 vs. NCBI nr
Match: gi|720097836|ref|XP_010247447.1| (PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Nelumbo nucifera])

HSP 1 Score: 104.0 bits (258), Expect = 3.5e-19
Identity = 61/139 (43.88%), Postives = 82/139 (58.99%), Query Frame = 3


Query: 189 LIHLANQTLESLSYLT----PSVFANHSRLLHCYFDRRHRVPPHSLFRHSLLCPSASLHP 248
           LI+LA  T++++S L     P  F +      C FD RHR+ P  LFRHSL C S+    
Sbjct: 68  LINLAESTVKAVSDLLYSGKPPEFDDD--FCSCPFDSRHRMAPEFLFRHSLRCSSSPA-- 127

Query: 249 IDPTQLFQSLLYPQTLQSSHQLVNENRFSQVLPDSDADLCFSLTDYTDATSNFFYADCPG 308
           +   +L +SL YP +L++  +L  ENRF Q L + D++LCFSL DY D  +NFFY DCPG
Sbjct: 128 VVDLELLESLHYPSSLKTEDELRRENRFVQSLEEPDSELCFSLDDYGDFGTNFFYRDCPG 187

Query: 309 VVALSNLDGNVQSLHTSPC 368
           VV+ S  D   +   T PC
Sbjct: 188 VVSSSEQDA-AKKTFTLPC 201

Query: 369  428
           
Sbjct: 248  201

Query: 429  488
           
Sbjct: 308  201

Query: 489  548
           
Sbjct: 368  201

Query: 549  594
           
Sbjct: 428  201

The following BLAST results are available for this feature:

BLAST of MU66962 vs. Swiss-Prot


Match Name	E-value	Identity	Description
U1148_ARATH	7.6e-14	38.30	U11/U12 small nuclear ribonucleoprotein 48 kDa protein OS=Arabidopsis thaliana G...	[more]

BLAST of MU66962 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0A0M085_CUCSA	3.4e-77	80.90	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G662780 PE=4 SV=1	[more]
A0A0A0M085_CUCSA	2.2e-07	93.75	Uncharacterized protein OS=Cucumis sativus GN=Csa_1G662780 PE=4 SV=1	[more]
A0A0J8CJJ6_BETVU	1.1e+02	60.87	Uncharacterized protein OS=Beta vulgaris subsp. vulgaris GN=BVRB_4g077030 PE=4 S...	[more]
A0A0K9QID6_SPIOL	6.3e+01	51.72	Uncharacterized protein OS=Spinacia oleracea GN=SOVF_181880 PE=4 SV=1	[more]
M5W6C9_PRUPE	4.2e-19	48.23	Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa001825mg PE=4 SV=1	[more]

BLAST of MU66962 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G04160.2	4.3e-15	38.30	unknown protein	[more]

BLAST of MU66962 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659086077\|ref\|XP_008443753.1\|	4.1e-84	88.76	PREDICTED: uncharacterized protein LOC103487266 [Cucumis melo]	[more]
gi\|778664187\|ref\|XP_011660240.1\|	7.0e-76	80.90	PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X1 [Cu...	[more]
gi\|778664192\|ref\|XP_004142553.2\|	7.0e-76	80.90	PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein isoform X2 [Cu...	[more]
gi\|645222904\|ref\|XP_008218377.1\|	5.5e-20	48.94	PREDICTED: uncharacterized protein LOC103318737 [Prunus mume]	[more]
gi\|720097836\|ref\|XP_010247447.1\|	3.5e-19	43.88	PREDICTED: U11/U12 small nuclear ribonucleoprotein 48 kDa protein [Nelumbo nucif...	[more]

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C010119	MELO3C010119	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
VEa0007I13	VEa0007I13	EST