MU66864 (transcribed_cluster) Melon (DHL92) v3.5.1 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	MU66864
Type	transcribed_cluster
Organism	Cucumis melo (Melon (DHL92) v3.5.1)
Description	BHLH transcription factor
Location	chr6 : 590546 .. 591266 (+)
Sequence length	715

Genome Viewer

Sequences

The following sequences are available for this feature:

transcribed_cluster sequence

GTTTGGTTTCCAAGAAAAAAAATCTTTTCTCCTCGATTCAGGCTGTCGCTTTCCTGGGAATGTTTATAGCCTTCCAAGTTTCTTTCCTTCTTCCCTTATCTCACCATCTTCTTTTCAGCACATTTCGCATGCCAAGTACCGGTCGGTTCTCTATCTTTATCTCTATATTTCCTCTTTCCTTGGTTTTTGGGTGATTGCTTTCTTTCTTTGTATTGGGTTTTGTTTTTTCTTATCTGGGTTTTTGTTATTTTTTGCTAATTTGTGAGATCTAGATAATGTTTTGGTGATGGTTTTGTTGGTAGAGGATTGATTCTGTTGGTGGTATTGGATAATGGTTTGAGGAATTCTTGAGTTTTTGGACTGAGATTTGATCTGGGGGTGTTGTAATTTTGAAAGGTGTGTGTGTGTGTGTGTGTGATTGAGATTGTATTCTGGTTTTGTGGGGGTGTTTTTAGAGATGAAGATTGAAGATGGGCTGCGGAGTGTTGGTGGGAAGGATGAGGATAAGACTGTGGTTGCTGCTGTTTTGGGGACACGGGCTTTTAATTACTTGATGTCTTGCTCTGTTTCGAATGAGAATCTGTTCATGGCGGTGAGGAATGATGAGAATTTGCAGAATAAGCTGTCGGATCTGGTGGAGAGACCCAACGCTTCTAATTTCAGCTGGAACTATGCAATTTTCTGGCAACTGTCTCATTCTAAATCTGGTGAATGG

Library


Library category	ESTs
melon CM-VEa library	1

Homology

[Close]

BLAST of MU66864 vs. Swiss-Prot
Match: BH013_ARATH (Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 1.5e-23
Identity = 51/72 (70.83%), Postives = 62/72 (86.11%), Query Frame = 2


Query: 497 DEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNDENLQNKLSDLVERPNASNFSWNYA 556
           ++DK +VA++LG RA +YL+S SVSN NL M + +DENLQNKLSDLVERPNASNFSWNYA
Sbjct: 10  EDDKAIVASLLGKRALDYLLSNSVSNANLLMTLGSDENLQNKLSDLVERPNASNFSWNYA 69

Query: 557 IFWQLSHSKSGE 616
           IFWQ+S SK+G+
Sbjct: 70  IFWQISRSKAGD 81

Query: 617  676
           
Sbjct: 130  81

Query: 677  713
           
Sbjct: 190  81

[Close]

BLAST of MU66864 vs. Swiss-Prot
Match: AIB_ARATH (Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2 SV=2)

HSP 1 Score: 89.0 bits (219), Expect = 7.8e-17
Identity = 42/79 (53.16%), Postives = 57/79 (72.15%), Query Frame = 2


Query: 476 LRSVGGKDEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNDENLQNKLSDLVERPNAS 535
           +  +G  DEDK+VV+AVLG  A ++L + S SN+NLF+ +  D+ L  KLS LV+ PN+ 
Sbjct: 3   MSDLGWDDEDKSVVSAVLGHLASDFLRANSNSNQNLFLVMGTDDTLNKKLSSLVDWPNSE 62

Query: 536 NFSWNYAIFWQLSHSKSGE 595
           NFSWNYAIFWQ + S+SG+
Sbjct: 63  NFSWNYAIFWQQTMSRSGQ 81

Query: 596  655
           
Sbjct: 123  81

Query: 656  713
           
Sbjct: 183  81

[Close]

BLAST of MU66864 vs. TrEMBL
Match: A0A0D2P750_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G109300 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.4e-28
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = 2


Query: 458 MKIEDGLRSVGGKDEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNDENLQNKLSDLV 517
           MKIE G+      DEDK +VAAVLGTRAF+YL+S SVSNENL M V +DENLQNKLSDLV
Sbjct: 1   MKIELGMGGGAWNDEDKAMVAAVLGTRAFDYLISSSVSNENLLMTVSSDENLQNKLSDLV 60

Query: 518 ERPNASNFSWNYAIFWQLSHSKSGEW 577
           +RPNASNFSWNYAIFWQ+S SKSG+W
Sbjct: 61  DRPNASNFSWNYAIFWQISRSKSGDW 86

Query: 578  637
           
Sbjct: 121  86

Query: 638  697
           
Sbjct: 181  86

Query: 698  716
           
Sbjct: 241  86

[Close]

BLAST of MU66864 vs. TrEMBL
Match: A0A0B0MY90_GOSAR (Transcription factor bHLH13-like protein OS=Gossypium arboreum GN=F383_06779 PE=4 SV=1)

HSP 1 Score: 134.0 bits (336), Expect = 2.3e-28
Identity = 64/87 (73.56%), Postives = 73/87 (83.91%), Query Frame = 2


Query: 455 EMKIEDGLRSVGGKDEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNDENLQNKLSDL 514
           +MKIE G+      DEDK +VA VLGTRAF+YL+S SVSNENL M V +DENLQNKLSDL
Sbjct: 13  DMKIELGMGGGAWNDEDKAMVATVLGTRAFDYLISSSVSNENLLMTVSSDENLQNKLSDL 72

Query: 515 VERPNASNFSWNYAIFWQLSHSKSGEW 574
           V+RPNASNFSWNYAIFWQ+S SKSG+W
Sbjct: 73  VDRPNASNFSWNYAIFWQISRSKSGDW 99

Query: 575  634
           
Sbjct: 133  99

Query: 635  694
           
Sbjct: 193  99

Query: 695  716
           
Sbjct: 253  99

[Close]

BLAST of MU66864 vs. TrEMBL
Match: W9S2H5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023493 PE=4 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.8e-28
Identity = 66/87 (75.86%), Postives = 74/87 (85.06%), Query Frame = 2


Query: 458 MKIEDGLRSVG-GKDEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNDENLQNKLSDL 517
           MKIE GL   G   DEDK + AAVLGTRAF+YL+S SV+NENL MAV +DENLQNKLSDL
Sbjct: 1   MKIEVGLGGSGVWNDEDKAMAAAVLGTRAFDYLISSSVTNENLLMAVGSDENLQNKLSDL 60

Query: 518 VERPNASNFSWNYAIFWQLSHSKSGEW 577
           V+RPNASNFSWNYAIFWQ+S SKSG+W
Sbjct: 61  VDRPNASNFSWNYAIFWQISRSKSGDW 87

Query: 578  637
           
Sbjct: 121  87

Query: 638  697
           
Sbjct: 181  87

Query: 698  716
           
Sbjct: 241  87

[Close]

BLAST of MU66864 vs. TrEMBL
Match: A0A061DSF0_THECC (Myc2 bHLH protein isoform 1 OS=Theobroma cacao GN=TCM_005131 PE=4 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 1.2e-27
Identity = 62/86 (72.09%), Postives = 72/86 (83.72%), Query Frame = 2


Query: 458 MKIEDGLRSVGGKDEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNDENLQNKLSDLV 517
           MKIE G+      DEDK +VAAVLGTRAF+YL++ SVSNENL M + +DENLQNKLSDLV
Sbjct: 1   MKIEVGMGGGAWNDEDKAMVAAVLGTRAFDYLITSSVSNENLLMTINSDENLQNKLSDLV 60

Query: 518 ERPNASNFSWNYAIFWQLSHSKSGEW 577
           +RPNASNFSWNYAIFWQ+S SKS +W
Sbjct: 61  DRPNASNFSWNYAIFWQISRSKSSDW 86

Query: 578  637
           
Sbjct: 121  86

Query: 638  697
           
Sbjct: 181  86

Query: 698  716
           
Sbjct: 241  86

[Close]

BLAST of MU66864 vs. TrEMBL
Match: B9I8Z0_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s09520g PE=4 SV=2)

HSP 1 Score: 130.6 bits (327), Expect = 2.6e-27
Identity = 63/86 (73.26%), Postives = 74/86 (86.05%), Query Frame = 2


Query: 458 MKIEDGLRSVGGKDEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNDENLQNKLSDLV 517
           MKIE G+      DEDKT+VAAVLGT+AFNYL+S SV+N+NL MA+  DE+LQNKLSDLV
Sbjct: 1   MKIELGVGGGAWNDEDKTMVAAVLGTKAFNYLLSNSVANQNLLMAMCGDESLQNKLSDLV 60

Query: 518 ERPNASNFSWNYAIFWQLSHSKSGEW 577
           +RPNASNFSWNYAIFWQ+S SKSG+W
Sbjct: 61  DRPNASNFSWNYAIFWQISCSKSGDW 86

Query: 578  637
           
Sbjct: 121  86

Query: 638  697
           
Sbjct: 181  86

Query: 698  716
           
Sbjct: 241  86

[Close]

BLAST of MU66864 vs. TAIR10
Match: AT1G01260.1 (AT1G01260.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein)

HSP 1 Score: 111.3 bits (277), Expect = 8.2e-25
Identity = 51/72 (70.83%), Postives = 62/72 (86.11%), Query Frame = 2


Query: 497 DEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNDENLQNKLSDLVERPNASNFSWNYA 556
           ++DK +VA++LG RA +YL+S SVSN NL M + +DENLQNKLSDLVERPNASNFSWNYA
Sbjct: 10  EDDKAIVASLLGKRALDYLLSNSVSNANLLMTLGSDENLQNKLSDLVERPNASNFSWNYA 69

Query: 557 IFWQLSHSKSGE 616
           IFWQ+S SK+G+
Sbjct: 70  IFWQISRSKAGD 81

Query: 617  676
           
Sbjct: 130  81

Query: 677  713
           
Sbjct: 190  81

[Close]

BLAST of MU66864 vs. TAIR10
Match: AT2G46510.1 (AT2G46510.1 ABA-inducible BHLH-type transcription factor)

HSP 1 Score: 89.0 bits (219), Expect = 4.4e-18
Identity = 42/79 (53.16%), Postives = 57/79 (72.15%), Query Frame = 2


Query: 476 LRSVGGKDEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNDENLQNKLSDLVERPNAS 535
           +  +G  DEDK+VV+AVLG  A ++L + S SN+NLF+ +  D+ L  KLS LV+ PN+ 
Sbjct: 3   MSDLGWDDEDKSVVSAVLGHLASDFLRANSNSNQNLFLVMGTDDTLNKKLSSLVDWPNSE 62

Query: 536 NFSWNYAIFWQLSHSKSGE 595
           NFSWNYAIFWQ + S+SG+
Sbjct: 63  NFSWNYAIFWQQTMSRSGQ 81

Query: 596  655
           
Sbjct: 123  81

Query: 656  713
           
Sbjct: 183  81

[Close]

BLAST of MU66864 vs. NCBI nr
Match: gi|659074943|ref|XP_008437879.1| (PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH13 [Cucumis melo])

HSP 1 Score: 177.6 bits (449), Expect = 2.6e-41
Identity = 86/86 (100.00%), Postives = 86/86 (100.00%), Query Frame = 2


Query: 458 MKIEDGLRSVGGKDEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNDENLQNKLSDLV 517
           MKIEDGLRSVGGKDEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNDENLQNKLSDLV
Sbjct: 1   MKIEDGLRSVGGKDEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNDENLQNKLSDLV 60

Query: 518 ERPNASNFSWNYAIFWQLSHSKSGEW 577
           ERPNASNFSWNYAIFWQLSHSKSGEW
Sbjct: 61  ERPNASNFSWNYAIFWQLSHSKSGEW 86

Query: 578  637
           
Sbjct: 121  86

Query: 638  697
           
Sbjct: 181  86

Query: 698  716
           
Sbjct: 241  86

[Close]

BLAST of MU66864 vs. NCBI nr
Match: gi|449432042|ref|XP_004133809.1| (PREDICTED: transcription factor bHLH13 [Cucumis sativus])

HSP 1 Score: 173.7 bits (439), Expect = 3.8e-40
Identity = 84/86 (97.67%), Postives = 84/86 (97.67%), Query Frame = 2


Query: 458 MKIEDGLRSVGGKDEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNDENLQNKLSDLV 517
           MKIEDGLRSVGGKDEDKTVV AVLGTRAFNYLMSCSV NENLFMAVRNDENLQNKLSDLV
Sbjct: 1   MKIEDGLRSVGGKDEDKTVVVAVLGTRAFNYLMSCSVLNENLFMAVRNDENLQNKLSDLV 60

Query: 518 ERPNASNFSWNYAIFWQLSHSKSGEW 577
           ERPNASNFSWNYAIFWQLSHSKSGEW
Sbjct: 61  ERPNASNFSWNYAIFWQLSHSKSGEW 86

Query: 578  637
           
Sbjct: 121  86

Query: 638  697
           
Sbjct: 181  86

Query: 698  716
           
Sbjct: 241  86

[Close]

BLAST of MU66864 vs. NCBI nr
Match: gi|823187254|ref|XP_012490129.1| (PREDICTED: transcription factor bHLH13 [Gossypium raimondii])

HSP 1 Score: 134.0 bits (336), Expect = 3.4e-28
Identity = 65/86 (75.58%), Postives = 73/86 (84.88%), Query Frame = 2


Query: 458 MKIEDGLRSVGGKDEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNDENLQNKLSDLV 517
           MKIE G+      DEDK +VAAVLGTRAF+YL+S SVSNENL M V +DENLQNKLSDLV
Sbjct: 1   MKIELGMGGGAWNDEDKAMVAAVLGTRAFDYLISSSVSNENLLMTVSSDENLQNKLSDLV 60

Query: 518 ERPNASNFSWNYAIFWQLSHSKSGEW 577
           +RPNASNFSWNYAIFWQ+S SKSG+W
Sbjct: 61  DRPNASNFSWNYAIFWQISRSKSGDW 86

Query: 578  637
           
Sbjct: 121  86

Query: 638  697
           
Sbjct: 181  86

Query: 698  716
           
Sbjct: 241  86

[Close]

BLAST of MU66864 vs. NCBI nr
Match: gi|728821745|gb|KHG04474.1| (Transcription factor bHLH13 -like protein [Gossypium arboreum])

HSP 1 Score: 133.7 bits (335), Expect = 4.4e-28
Identity = 64/87 (73.56%), Postives = 73/87 (83.91%), Query Frame = 2


Query: 455 EMKIEDGLRSVGGKDEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNDENLQNKLSDL 514
           +MKIE G+      DEDK +VA VLGTRAF+YL+S SVSNENL M V +DENLQNKLSDL
Sbjct: 13  DMKIELGMGGGAWNDEDKAMVATVLGTRAFDYLISSSVSNENLLMTVSSDENLQNKLSDL 72

Query: 515 VERPNASNFSWNYAIFWQLSHSKSGEW 574
           V+RPNASNFSWNYAIFWQ+S SKSG+W
Sbjct: 73  VDRPNASNFSWNYAIFWQISRSKSGDW 99

Query: 575  634
           
Sbjct: 133  99

Query: 635  694
           
Sbjct: 193  99

Query: 695  716
           
Sbjct: 253  99

[Close]

BLAST of MU66864 vs. NCBI nr
Match: gi|703114704|ref|XP_010100724.1| (hypothetical protein L484_023493 [Morus notabilis])

HSP 1 Score: 131.7 bits (330), Expect = 1.7e-27
Identity = 66/87 (75.86%), Postives = 74/87 (85.06%), Query Frame = 2


Query: 458 MKIEDGLRSVG-GKDEDKTVVAAVLGTRAFNYLMSCSVSNENLFMAVRNDENLQNKLSDL 517
           MKIE GL   G   DEDK + AAVLGTRAF+YL+S SV+NENL MAV +DENLQNKLSDL
Sbjct: 1   MKIEVGLGGSGVWNDEDKAMAAAVLGTRAFDYLISSSVTNENLLMAVGSDENLQNKLSDL 60

Query: 518 VERPNASNFSWNYAIFWQLSHSKSGEW 577
           V+RPNASNFSWNYAIFWQ+S SKSG+W
Sbjct: 61  VDRPNASNFSWNYAIFWQISRSKSGDW 87

Query: 578  637
           
Sbjct: 121  87

Query: 638  697
           
Sbjct: 181  87

Query: 698  716
           
Sbjct: 241  87

The following BLAST results are available for this feature:

BLAST of MU66864 vs. Swiss-Prot


Match Name	E-value	Identity	Description
BH013_ARATH	1.5e-23	70.83	Transcription factor bHLH13 OS=Arabidopsis thaliana GN=BHLH13 PE=2 SV=1	[more]
AIB_ARATH	7.8e-17	53.16	Transcription factor ABA-INDUCIBLE bHLH-TYPE OS=Arabidopsis thaliana GN=AIB PE=2...	[more]

BLAST of MU66864 vs. TrEMBL


Match Name	E-value	Identity	Description
A0A0D2P750_GOSRA	1.4e-28	75.58	Uncharacterized protein OS=Gossypium raimondii GN=B456_007G109300 PE=4 SV=1	[more]
A0A0B0MY90_GOSAR	2.3e-28	73.56	Transcription factor bHLH13-like protein OS=Gossypium arboreum GN=F383_06779 PE=...	[more]
W9S2H5_9ROSA	6.8e-28	75.86	Uncharacterized protein OS=Morus notabilis GN=L484_023493 PE=4 SV=1	[more]
A0A061DSF0_THECC	1.2e-27	72.09	Myc2 bHLH protein isoform 1 OS=Theobroma cacao GN=TCM_005131 PE=4 SV=1	[more]
B9I8Z0_POPTR	2.6e-27	73.26	Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0014s09520g PE=4 SV=2	[more]

BLAST of MU66864 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G01260.1	8.2e-25	70.83	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT2G46510.1	4.4e-18	53.16	ABA-inducible BHLH-type transcription factor	[more]

BLAST of MU66864 vs. NCBI nr


Match Name	E-value	Identity	Description
gi\|659074943\|ref\|XP_008437879.1\|	2.6e-41	100.00	PREDICTED: LOW QUALITY PROTEIN: transcription factor bHLH13 [Cucumis melo]	[more]
gi\|449432042\|ref\|XP_004133809.1\|	3.8e-40	97.67	PREDICTED: transcription factor bHLH13 [Cucumis sativus]	[more]
gi\|823187254\|ref\|XP_012490129.1\|	3.4e-28	75.58	PREDICTED: transcription factor bHLH13 [Gossypium raimondii]	[more]
gi\|728821745\|gb\|KHG04474.1\|	4.4e-28	73.56	Transcription factor bHLH13 -like protein [Gossypium arboreum]	[more]
gi\|703114704\|ref\|XP_010100724.1\|	1.7e-27	75.86	hypothetical protein L484_023493 [Morus notabilis]	[more]

Annotated Terms

The following terms have been associated with this transcribed_cluster:

Vocabulary: **INTERPRO**
Term	Definition

Relationships

This transcribed_cluster is associated with the following gene feature(s):


Feature Name	Unique Name	Type
MELO3C006016	MELO3C006016	gene

The following EST feature(s) are a part of this transcribed_cluster:


Feature Name	Unique Name	Type
VEa0006D21	VEa0006D21	EST

InterPro

Analysis Name: InterPro Annotations of melon unigene v4
Date Performed: 2016-11-16


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11514	MYC	coord: 27..86 score: 8.5
None	No IPR available	PANTHER	PTHR11514:SF47	TRANSCRIPTION FACTOR ABA-INDUCIBLE BHLH-TYPE-RELATED	coord: 27..86 score: 8.5